RNA–Protein interactions for RNA: ENST00000537756.2

CPT1A-203, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-203ENST00000537756 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
CPT1A-203ENST00000537756 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
CPT1A-203ENST00000537756 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
CPT1A-203ENST00000537756 RGPD2P0DJD1 1756 aa16.53■□□□□ 0.24
CPT1A-203ENST00000537756 KDRP35968 1356 aa16.52■□□□□ 0.24
CPT1A-203ENST00000537756 PCDH11XQ9BZA7 1347 aa16.52■□□□□ 0.24
CPT1A-203ENST00000537756 PCDH11YQ9BZA8 1340 aa16.52■□□□□ 0.24
CPT1A-203ENST00000537756 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.24
CPT1A-203ENST00000537756 DDX54Q8TDD1 881 aaKnown RBP16.52■□□□□ 0.24
CPT1A-203ENST00000537756 EN1Q05925 392 aaPredicted RBP16.51■□□□□ 0.23
CPT1A-203ENST00000537756 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
CPT1A-203ENST00000537756 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
CPT1A-203ENST00000537756 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
CPT1A-203ENST00000537756 SBF2Q86WG5 1849 aa16.49■□□□□ 0.23
CPT1A-203ENST00000537756 CYP27B1O15528 508 aa16.48■□□□□ 0.23
CPT1A-203ENST00000537756 PPP2R1AP30153 589 aa16.48■□□□□ 0.23
CPT1A-203ENST00000537756 RALBP1Q15311 655 aa16.48■□□□□ 0.23
CPT1A-203ENST00000537756 PLEKHO1Q53GL0 409 aaPredicted RBP16.48■□□□□ 0.23
CPT1A-203ENST00000537756 CFAP53Q96M91 514 aa16.48■□□□□ 0.23
CPT1A-203ENST00000537756 EZH2Q15910 746 aaKnown RBP16.47■□□□□ 0.23
CPT1A-203ENST00000537756 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
CPT1A-203ENST00000537756 RGPD3A6NKT7 1758 aaPredicted RBP16.46■□□□□ 0.23
CPT1A-203ENST00000537756 RGPD4Q7Z3J3 1758 aa16.46■□□□□ 0.23
CPT1A-203ENST00000537756 PKD1L3Q7Z443 1732 aa16.46■□□□□ 0.23
CPT1A-203ENST00000537756 KCNQ2O43526 872 aa16.46■□□□□ 0.23
CPT1A-203ENST00000537756 HMGB2P26583 209 aaKnown RBP16.46■□□□□ 0.23
CPT1A-203ENST00000537756 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
CPT1A-203ENST00000537756 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
CPT1A-203ENST00000537756 SULT6B1Q6IMI4 303 aa16.45■□□□□ 0.22
CPT1A-203ENST00000537756 PTF1AQ7RTS3 328 aa16.45■□□□□ 0.22
CPT1A-203ENST00000537756 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
CPT1A-203ENST00000537756 COL3A1P02461 1466 aaPredicted RBP16.45■□□□□ 0.22
CPT1A-203ENST00000537756 NHSQ6T4R5 1651 aa16.45■□□□□ 0.22
CPT1A-203ENST00000537756 PHKG2P15735 406 aa16.44■□□□□ 0.22
CPT1A-203ENST00000537756 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
CPT1A-203ENST00000537756 SHANK3Q9BYB0 1731 aa16.44■□□□□ 0.22
CPT1A-203ENST00000537756 NBPF14Q5TI25 921 aa16.43■□□□□ 0.22
CPT1A-203ENST00000537756 PROM2Q8N271 834 aa16.43■□□□□ 0.22
CPT1A-203ENST00000537756 ACSBG1Q96GR2 724 aa16.43■□□□□ 0.22
CPT1A-203ENST00000537756 SLC27A3Q5K4L6 730 aa16.42■□□□□ 0.22
CPT1A-203ENST00000537756 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
CPT1A-203ENST00000537756 ZNF316A6NFI3 1004 aaPredicted RBP16.41■□□□□ 0.22
CPT1A-203ENST00000537756 ERVV-2B6SEH9 535 aa16.41■□□□□ 0.22
CPT1A-203ENST00000537756 TXNRD1Q16881 649 aa16.41■□□□□ 0.22
CPT1A-203ENST00000537756 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
CPT1A-203ENST00000537756 FCHSD2O94868 740 aa16.39■□□□□ 0.21
CPT1A-203ENST00000537756 ZNF530Q6P9A1 599 aaPredicted RBP16.39■□□□□ 0.21
CPT1A-203ENST00000537756 SMARCC1Q92922 1105 aaPredicted RBP16.39■□□□□ 0.21
CPT1A-203ENST00000537756 RREB1Q92766 1687 aa16.39■□□□□ 0.21
CPT1A-203ENST00000537756 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
CPT1A-203ENST00000537756 AKAP4Q5JQC9 854 aa16.37■□□□□ 0.21
CPT1A-203ENST00000537756 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
CPT1A-203ENST00000537756 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
CPT1A-203ENST00000537756 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
CPT1A-203ENST00000537756 HMOX1P09601 288 aa16.36■□□□□ 0.21
CPT1A-203ENST00000537756 PIGBQ92521 554 aa16.36■□□□□ 0.21
CPT1A-203ENST00000537756 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
CPT1A-203ENST00000537756 KAT6BQ8WYB5 2073 aa16.36■□□□□ 0.21
CPT1A-203ENST00000537756 BTAF1O14981 1849 aa16.35■□□□□ 0.21
CPT1A-203ENST00000537756 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
CPT1A-203ENST00000537756 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
CPT1A-203ENST00000537756 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
CPT1A-203ENST00000537756 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
CPT1A-203ENST00000537756 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
CPT1A-203ENST00000537756 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.21
CPT1A-203ENST00000537756 MTHFSDQ2M296 383 aaKnown RBP16.33■□□□□ 0.2
CPT1A-203ENST00000537756 PNNQ9H307 717 aaKnown RBP16.33■□□□□ 0.2
CPT1A-203ENST00000537756 NUP188Q5SRE5 1749 aa16.33■□□□□ 0.2
CPT1A-203ENST00000537756 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
CPT1A-203ENST00000537756 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.2
CPT1A-203ENST00000537756 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
CPT1A-203ENST00000537756 SLC15A2Q16348 729 aa16.32■□□□□ 0.2
CPT1A-203ENST00000537756 LRRC4BQ9NT99 713 aa16.32■□□□□ 0.2
CPT1A-203ENST00000537756 STK32BQ9NY57 414 aa16.32■□□□□ 0.2
CPT1A-203ENST00000537756 KDM6AO15550 1401 aaPredicted RBP16.31■□□□□ 0.2
CPT1A-203ENST00000537756 PALLDQ8WX93 1383 aa16.3■□□□□ 0.2
CPT1A-203ENST00000537756 RNMTO43148 476 aaKnown RBP16.3■□□□□ 0.2
CPT1A-203ENST00000537756 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
CPT1A-203ENST00000537756 PRKAR2BP31323 418 aa16.3■□□□□ 0.2
CPT1A-203ENST00000537756 CABP4P57796 275 aa16.3■□□□□ 0.2
CPT1A-203ENST00000537756 LY75O60449 1722 aa16.29■□□□□ 0.2
CPT1A-203ENST00000537756 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
CPT1A-203ENST00000537756 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
CPT1A-203ENST00000537756 AKT1S1Q96B36 256 aa16.29■□□□□ 0.2
CPT1A-203ENST00000537756 ANO8Q9HCE9 1232 aaPredicted RBP16.29■□□□□ 0.2
CPT1A-203ENST00000537756 ATG3Q9NT62 314 aa16.29■□□□□ 0.2
CPT1A-203ENST00000537756 CCNL1Q9UK58 526 aaPredicted RBP16.29■□□□□ 0.2
CPT1A-203ENST00000537756 ITGB4P16144 1822 aa16.29■□□□□ 0.2
CPT1A-203ENST00000537756 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
CPT1A-203ENST00000537756 SLC52A2Q9HAB3 445 aa16.28■□□□□ 0.2
CPT1A-203ENST00000537756 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.2
CPT1A-203ENST00000537756 NFATC2IPQ8NCF5 419 aa16.27■□□□□ 0.2
CPT1A-203ENST00000537756 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
CPT1A-203ENST00000537756 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.19
CPT1A-203ENST00000537756 PAPPAQ13219 1627 aa16.27■□□□□ 0.19
CPT1A-203ENST00000537756 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
CPT1A-203ENST00000537756 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
CPT1A-203ENST00000537756 NEFMP07197 916 aa16.26■□□□□ 0.19
CPT1A-203ENST00000537756 SIK1P57059 783 aa16.26■□□□□ 0.19
CPT1A-203ENST00000537756 SLC16A10Q8TF71 515 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms