RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.32
PTPN6-209ENST00000537533 USHBP1Q8N6Y0 703 aa17.08■□□□□ 0.32
PTPN6-209ENST00000537533 ZCRB1Q8TBF4 217 aaKnown RBP17.08■□□□□ 0.32
PTPN6-209ENST00000537533 NPC1L1Q9UHC9 1359 aa17.06■□□□□ 0.32
PTPN6-209ENST00000537533 RAPGEF4Q8WZA2 1011 aa17.06■□□□□ 0.32
PTPN6-209ENST00000537533 PKD1L3Q7Z443 1732 aa17.06■□□□□ 0.32
PTPN6-209ENST00000537533 BTAF1O14981 1849 aa17.05■□□□□ 0.32
PTPN6-209ENST00000537533 TATP17735 454 aaPredicted RBP17.05■□□□□ 0.32
PTPN6-209ENST00000537533 DDX54Q8TDD1 881 aaKnown RBP17.05■□□□□ 0.32
PTPN6-209ENST00000537533 EYA1Q99502 592 aa17.05■□□□□ 0.32
PTPN6-209ENST00000537533 KCNQ2O43526 872 aa17.04■□□□□ 0.32
PTPN6-209ENST00000537533 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
PTPN6-209ENST00000537533 SRCAPQ6ZRS2 3230 aa17.03■□□□□ 0.32
PTPN6-209ENST00000537533 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
PTPN6-209ENST00000537533 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.32
PTPN6-209ENST00000537533 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.31
PTPN6-209ENST00000537533 PROM2Q8N271 834 aa17.01■□□□□ 0.31
PTPN6-209ENST00000537533 IGSF1Q8N6C5 1336 aa17■□□□□ 0.31
PTPN6-209ENST00000537533 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
PTPN6-209ENST00000537533 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
PTPN6-209ENST00000537533 PSDA5PKW4 1024 aaPredicted RBP16.99■□□□□ 0.31
PTPN6-209ENST00000537533 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
PTPN6-209ENST00000537533 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
PTPN6-209ENST00000537533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.31
PTPN6-209ENST00000537533 R3HDM1Q15032 1099 aaKnown RBP16.98■□□□□ 0.31
PTPN6-209ENST00000537533 CYP27B1O15528 508 aa16.97■□□□□ 0.31
PTPN6-209ENST00000537533 TXNRD1Q16881 649 aa16.97■□□□□ 0.31
PTPN6-209ENST00000537533 ITGB4P16144 1822 aa16.97■□□□□ 0.31
PTPN6-209ENST00000537533 LRP5O75197 1615 aa16.96■□□□□ 0.31
PTPN6-209ENST00000537533 LY75O60449 1722 aa16.96■□□□□ 0.31
PTPN6-209ENST00000537533 IL13P35225 146 aa16.96■□□□□ 0.31
PTPN6-209ENST00000537533 PRIM1P49642 420 aaKnown RBP16.96■□□□□ 0.31
PTPN6-209ENST00000537533 MTHFSP49914 203 aa16.96■□□□□ 0.31
PTPN6-209ENST00000537533 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.31
PTPN6-209ENST00000537533 SPG7Q9UQ90 795 aa16.96■□□□□ 0.31
PTPN6-209ENST00000537533 TOGARAM1Q9Y4F4 1720 aa16.96■□□□□ 0.3
PTPN6-209ENST00000537533 KDRP35968 1356 aa16.94■□□□□ 0.3
PTPN6-209ENST00000537533 PAPPAQ13219 1627 aa16.94■□□□□ 0.3
PTPN6-209ENST00000537533 SYTL4Q96C24 671 aaPredicted RBP16.92■□□□□ 0.3
PTPN6-209ENST00000537533 ANO8Q9HCE9 1232 aaPredicted RBP16.92■□□□□ 0.3
PTPN6-209ENST00000537533 PHKG2P15735 406 aa16.91■□□□□ 0.3
PTPN6-209ENST00000537533 SLC27A3Q5K4L6 730 aa16.91■□□□□ 0.3
PTPN6-209ENST00000537533 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
PTPN6-209ENST00000537533 COL3A1P02461 1466 aaPredicted RBP16.91■□□□□ 0.3
PTPN6-209ENST00000537533 CASZ1Q86V15 1759 aa16.9■□□□□ 0.3
PTPN6-209ENST00000537533 AMOTQ4VCS5 1084 aa16.9■□□□□ 0.3
PTPN6-209ENST00000537533 SULT6B1Q6IMI4 303 aa16.9■□□□□ 0.3
PTPN6-209ENST00000537533 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
PTPN6-209ENST00000537533 PLEKHO1Q53GL0 409 aaPredicted RBP16.89■□□□□ 0.29
PTPN6-209ENST00000537533 LRRC4BQ9NT99 713 aa16.89■□□□□ 0.29
PTPN6-209ENST00000537533 QSER1Q2KHR3 1735 aa16.88■□□□□ 0.29
PTPN6-209ENST00000537533 DIAPH1O60610 1272 aaKnown RBP16.88■□□□□ 0.29
PTPN6-209ENST00000537533 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
PTPN6-209ENST00000537533 STK32BQ9NY57 414 aa16.88■□□□□ 0.29
PTPN6-209ENST00000537533 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
PTPN6-209ENST00000537533 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
PTPN6-209ENST00000537533 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
PTPN6-209ENST00000537533 TAF1LQ8IZX4 1826 aa16.86■□□□□ 0.29
PTPN6-209ENST00000537533 PIGBQ92521 554 aa16.85■□□□□ 0.29
PTPN6-209ENST00000537533 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
PTPN6-209ENST00000537533 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
PTPN6-209ENST00000537533 SMARCC1Q92922 1105 aaPredicted RBP16.84■□□□□ 0.29
PTPN6-209ENST00000537533 AKT1S1Q96B36 256 aa16.84■□□□□ 0.29
PTPN6-209ENST00000537533 DCAF5Q96JK2 942 aa16.84■□□□□ 0.29
PTPN6-209ENST00000537533 SCN11AQ9UI33 1791 aa16.84■□□□□ 0.29
PTPN6-209ENST00000537533 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
PTPN6-209ENST00000537533 TUBGCP6Q96RT7 1819 aa16.84■□□□□ 0.29
PTPN6-209ENST00000537533 ERVV-2B6SEH9 535 aa16.83■□□□□ 0.28
PTPN6-209ENST00000537533 C5P01031 1676 aa16.83■□□□□ 0.28
PTPN6-209ENST00000537533 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.28
PTPN6-209ENST00000537533 ZNF827Q17R98 1081 aa16.83■□□□□ 0.28
PTPN6-209ENST00000537533 PALLDQ8WX93 1383 aa16.83■□□□□ 0.28
PTPN6-209ENST00000537533 CCNL1Q9UK58 526 aaPredicted RBP16.83■□□□□ 0.28
PTPN6-209ENST00000537533 KDM6AO15550 1401 aaPredicted RBP16.82■□□□□ 0.28
PTPN6-209ENST00000537533 HMOX1P09601 288 aa16.82■□□□□ 0.28
PTPN6-209ENST00000537533 HMGB2P26583 209 aaKnown RBP16.82■□□□□ 0.28
PTPN6-209ENST00000537533 PDGFDQ9GZP0 370 aaPredicted RBP16.82■□□□□ 0.28
PTPN6-209ENST00000537533 TMOD3Q9NYL9 352 aa16.82■□□□□ 0.28
PTPN6-209ENST00000537533 C1orf141Q5JVX7 400 aa16.81■□□□□ 0.28
PTPN6-209ENST00000537533 CFAP53Q96M91 514 aa16.81■□□□□ 0.28
PTPN6-209ENST00000537533 KCNQ4P56696 695 aa16.8■□□□□ 0.28
PTPN6-209ENST00000537533 AKAP4Q5JQC9 854 aa16.8■□□□□ 0.28
PTPN6-209ENST00000537533 SPON1Q9HCB6 807 aa16.8■□□□□ 0.28
PTPN6-209ENST00000537533 ZNF831Q5JPB2 1677 aa16.79■□□□□ 0.28
PTPN6-209ENST00000537533 ADAMTS7Q9UKP4 1686 aa16.79■□□□□ 0.28
PTPN6-209ENST00000537533 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
PTPN6-209ENST00000537533 ATG3Q9NT62 314 aa16.78■□□□□ 0.28
PTPN6-209ENST00000537533 ASAP1Q9ULH1 1129 aa16.78■□□□□ 0.28
PTPN6-209ENST00000537533 COL24A1Q17RW2 1714 aa16.78■□□□□ 0.28
PTPN6-209ENST00000537533 MTHFSDQ2M296 383 aaKnown RBP16.77■□□□□ 0.28
PTPN6-209ENST00000537533 C4BP0C0L5 1744 aa16.76■□□□□ 0.27
PTPN6-209ENST00000537533 PNPLA7Q6ZV29 1317 aa16.76■□□□□ 0.27
PTPN6-209ENST00000537533 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
PTPN6-209ENST00000537533 SIK1P57059 783 aa16.76■□□□□ 0.27
PTPN6-209ENST00000537533 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
PTPN6-209ENST00000537533 MTFR1LQ9H019 292 aa16.76■□□□□ 0.27
PTPN6-209ENST00000537533 NUDCQ9Y266 331 aa16.76■□□□□ 0.27
PTPN6-209ENST00000537533 MRC1P22897 1456 aa16.75■□□□□ 0.27
PTPN6-209ENST00000537533 ZBTB7AO95365 584 aa16.75■□□□□ 0.27
PTPN6-209ENST00000537533 CABP4P57796 275 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms