RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 OCSTAMPQ9BR26 566 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 TRAIPQ9BWF2 469 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.83□□□□□ -1.48
SNHG1-202ENST00000535689 DNAAF2Q9NVR5 837 aaKnown RBP5.83□□□□□ -1.48
SNHG1-202ENST00000535689 GTF2E1P29083 439 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-202ENST00000535689 SKOR1P84550 965 aa5.82□□□□□ -1.48
SNHG1-202ENST00000535689 C4orf48Q5BLP8 95 aa5.82□□□□□ -1.48
SNHG1-202ENST00000535689 SIAH2O43255 324 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 UPP2O95045 317 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 ALDH1A1P00352 501 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 FSHRP23945 695 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 PRR20EP86478 221 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 PRR20CP86479 221 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 PRR20DP86480 221 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 PRR20BP86481 221 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 PRR20AP86496 221 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 SWI5Q1ZZU3 235 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 INTS6LQ5JSJ4 861 aaKnown RBP5.81□□□□□ -1.48
SNHG1-202ENST00000535689 MRGPRX2Q96LB1 330 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 CHMP3Q9Y3E7 222 aa5.81□□□□□ -1.48
SNHG1-202ENST00000535689 FAM187AA6NFU0 413 aa5.8□□□□□ -1.48
SNHG1-202ENST00000535689 M0R2N6 131 aa5.8□□□□□ -1.48
SNHG1-202ENST00000535689 GNRH1P01148 92 aa5.8□□□□□ -1.48
SNHG1-202ENST00000535689 SEC13P55735 322 aa5.8□□□□□ -1.48
SNHG1-202ENST00000535689 GTF2IP78347 998 aa5.8□□□□□ -1.48
SNHG1-202ENST00000535689 TRAF7Q6Q0C0 670 aa5.8□□□□□ -1.48
SNHG1-202ENST00000535689 OGFOD1Q8N543 542 aa5.8□□□□□ -1.48
SNHG1-202ENST00000535689 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L15C9J2P7 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L10C9JJH3 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L13C9JLJ4 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L12C9JPN9 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L11C9JVI0 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L21D6R901 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L18D6R9N7 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L22D6RA61 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L17D6RBQ6 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L19D6RCP7 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L20D6RJB6 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 ERVH48-1M5A8F1 160 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 BRD1O95696 1058 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 RAB15P59190 212 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 ERVK-9P63128 1117 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 USP17L24Q0WX57 530 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 KANK4Q5T7N3 995 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-202ENST00000535689 ANKMY2Q8IV38 441 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 GAS2L2Q8NHY3 880 aa5.79□□□□□ -1.48
SNHG1-202ENST00000535689 NOVA2Q9UNW9 492 aaKnown RBP5.79□□□□□ -1.48
SNHG1-202ENST00000535689 PIK3CDO00329 1044 aa5.78□□□□□ -1.48
SNHG1-202ENST00000535689 NNTQ13423 1086 aa5.78□□□□□ -1.48
SNHG1-202ENST00000535689 PPP1R26Q5T8A7 1209 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-202ENST00000535689 CCDC102BQ68D86 513 aa5.78□□□□□ -1.48
SNHG1-202ENST00000535689 SIX5Q8N196 739 aa5.78□□□□□ -1.48
SNHG1-202ENST00000535689 DEPDC4Q8N2C3 294 aa5.78□□□□□ -1.48
SNHG1-202ENST00000535689 ST8SIA5O15466 376 aa5.77□□□□□ -1.49
SNHG1-202ENST00000535689 GRM5P41594 1212 aa5.77□□□□□ -1.49
SNHG1-202ENST00000535689 SRPK2P78362 688 aaKnown RBP5.77□□□□□ -1.49
SNHG1-202ENST00000535689 KCNA1Q09470 495 aa5.77□□□□□ -1.49
SNHG1-202ENST00000535689 PTK7Q13308 1070 aa5.77□□□□□ -1.49
SNHG1-202ENST00000535689 NBPF15Q8N660 670 aa5.77□□□□□ -1.49
SNHG1-202ENST00000535689 CCDC85AQ96PX6 553 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-202ENST00000535689 TOR4AQ9NXH8 423 aa5.77□□□□□ -1.49
SNHG1-202ENST00000535689 DCAF1Q9Y4B6 1507 aa5.77□□□□□ -1.49
SNHG1-202ENST00000535689 J3QL48 77 aa5.76□□□□□ -1.49
SNHG1-202ENST00000535689 WASLO00401 505 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-202ENST00000535689 PKDCCQ504Y2 493 aa5.76□□□□□ -1.49
SNHG1-202ENST00000535689 RETREG2Q8NC44 543 aa5.76□□□□□ -1.49
SNHG1-202ENST00000535689 CCER1Q8TC90 406 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-202ENST00000535689 NLRP3Q96P20 1036 aa5.76□□□□□ -1.49
SNHG1-202ENST00000535689 TLL2Q9Y6L7 1015 aa5.76□□□□□ -1.49
SNHG1-202ENST00000535689 ERCC6Q03468 1493 aa5.76□□□□□ -1.49
SNHG1-202ENST00000535689 CDCA8Q53HL2 280 aa5.75□□□□□ -1.49
SNHG1-202ENST00000535689 TPCN2Q8NHX9 752 aa5.75□□□□□ -1.49
SNHG1-202ENST00000535689 VTI1AQ96AJ9 217 aa5.75□□□□□ -1.49
SNHG1-202ENST00000535689 TSEN34Q9BSV6 310 aaKnown RBP5.75□□□□□ -1.49
SNHG1-202ENST00000535689 PTCD1O75127 700 aaKnown RBP5.74□□□□□ -1.49
SNHG1-202ENST00000535689 ADH1AP07327 375 aa5.74□□□□□ -1.49
SNHG1-202ENST00000535689 WDR4P57081 412 aaKnown RBP5.74□□□□□ -1.49
SNHG1-202ENST00000535689 DPYDQ12882 1025 aa5.74□□□□□ -1.49
SNHG1-202ENST00000535689 CTC1Q2NKJ3 1217 aa5.74□□□□□ -1.49
SNHG1-202ENST00000535689 CLP1Q92989 425 aaKnown RBP5.74□□□□□ -1.49
SNHG1-202ENST00000535689 HINFPQ9BQA5 517 aa5.74□□□□□ -1.49
SNHG1-202ENST00000535689 DACH1Q9UI36 760 aa5.74□□□□□ -1.49
SNHG1-202ENST00000535689 SCRIBQ14160 1630 aa5.74□□□□□ -1.49
SNHG1-202ENST00000535689 SMPD1P17405 629 aa5.73□□□□□ -1.49
SNHG1-202ENST00000535689 ARID4AP29374 1257 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-202ENST00000535689 GPC1P35052 558 aa5.73□□□□□ -1.49
SNHG1-202ENST00000535689 SCARF1Q14162 830 aa5.73□□□□□ -1.49
SNHG1-202ENST00000535689 ZNF784Q8NCA9 323 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-202ENST00000535689 ZNF594Q96JF6 807 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-202ENST00000535689 CYLDQ9NQC7 956 aa5.73□□□□□ -1.49
SNHG1-202ENST00000535689 PCDHGA11Q9Y5H2 935 aa5.73□□□□□ -1.49
SNHG1-202ENST00000535689 POTECB2RU33 542 aa5.72□□□□□ -1.49
SNHG1-202ENST00000535689 DGAT1O75907 488 aa5.72□□□□□ -1.49
SNHG1-202ENST00000535689 ZIC2O95409 532 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-202ENST00000535689 INHAP05111 366 aa5.72□□□□□ -1.49
SNHG1-202ENST00000535689 GDF10P55107 478 aa5.72□□□□□ -1.49
SNHG1-202ENST00000535689 CRTC2Q53ET0 693 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-202ENST00000535689 ZBTB7BO15156 539 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-202ENST00000535689 CAPN5O15484 640 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms