RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 CPSF1Q10570 1443 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-219ENST00000534753 SSH2Q76I76 1423 aa12.47□□□□□ -0.41
CCDC90B-219ENST00000534753 BRWD3Q6RI45 1802 aa12.46□□□□□ -0.41
CCDC90B-219ENST00000534753 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
CCDC90B-219ENST00000534753 KCNH5Q8NCM2 988 aa12.46□□□□□ -0.41
CCDC90B-219ENST00000534753 WDR70Q9NW82 654 aa12.46□□□□□ -0.41
CCDC90B-219ENST00000534753 A0A1W2PP64 1363 aa12.45□□□□□ -0.42
CCDC90B-219ENST00000534753 CPDO75976 1380 aa12.45□□□□□ -0.42
CCDC90B-219ENST00000534753 CAMTA1Q9Y6Y1 1673 aa12.45□□□□□ -0.42
CCDC90B-219ENST00000534753 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-219ENST00000534753 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
CCDC90B-219ENST00000534753 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-219ENST00000534753 CD163L1Q9NR16 1453 aa12.45□□□□□ -0.42
CCDC90B-219ENST00000534753 TOM1L2Q6ZVM7 507 aa12.44□□□□□ -0.42
CCDC90B-219ENST00000534753 MON2Q7Z3U7 1717 aa12.44□□□□□ -0.42
CCDC90B-219ENST00000534753 SLIT3O75094 1523 aa12.43□□□□□ -0.42
CCDC90B-219ENST00000534753 CDCA8Q53HL2 280 aa12.43□□□□□ -0.42
CCDC90B-219ENST00000534753 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
CCDC90B-219ENST00000534753 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-219ENST00000534753 AXIN2Q9Y2T1 843 aa12.43□□□□□ -0.42
CCDC90B-219ENST00000534753 EDC4Q6P2E9 1401 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-219ENST00000534753 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
CCDC90B-219ENST00000534753 ARHGEF25Q86VW2 580 aa12.42□□□□□ -0.42
CCDC90B-219ENST00000534753 AATKQ6ZMQ8 1374 aa12.42□□□□□ -0.42
CCDC90B-219ENST00000534753 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
CCDC90B-219ENST00000534753 COL5A2P05997 1499 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-219ENST00000534753 GOLGA2Q08379 1002 aa12.41□□□□□ -0.42
CCDC90B-219ENST00000534753 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
CCDC90B-219ENST00000534753 HSPA5P11021 654 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-219ENST00000534753 EIF4G2P78344 907 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCDC90B-219ENST00000534753 DEFB132Q7Z7B7 95 aa12.4□□□□□ -0.42
CCDC90B-219ENST00000534753 COG3Q96JB2 828 aa12.4□□□□□ -0.42
CCDC90B-219ENST00000534753 NINLQ9Y2I6 1382 aa12.4□□□□□ -0.42
CCDC90B-219ENST00000534753 BLMP54132 1417 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-219ENST00000534753 CRB1P82279 1406 aa12.39□□□□□ -0.43
CCDC90B-219ENST00000534753 FBLN1P23142 703 aa12.39□□□□□ -0.43
CCDC90B-219ENST00000534753 BARGINQ6ZT62 677 aa12.39□□□□□ -0.43
CCDC90B-219ENST00000534753 LTV1Q96GA3 475 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-219ENST00000534753 GGNBP2Q9H3C7 697 aa12.39□□□□□ -0.43
CCDC90B-219ENST00000534753 USP31Q70CQ4 1352 aa12.39□□□□□ -0.43
CCDC90B-219ENST00000534753 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
CCDC90B-219ENST00000534753 NFAT5O94916 1531 aa12.38□□□□□ -0.43
CCDC90B-219ENST00000534753 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
CCDC90B-219ENST00000534753 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-219ENST00000534753 NLRP2Q9NX02 1062 aa12.38□□□□□ -0.43
CCDC90B-219ENST00000534753 ANKRD36BQ8N2N9 1353 aa12.38□□□□□ -0.43
CCDC90B-219ENST00000534753 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
CCDC90B-219ENST00000534753 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
CCDC90B-219ENST00000534753 TRIM37O94972 964 aa12.37□□□□□ -0.43
CCDC90B-219ENST00000534753 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
CCDC90B-219ENST00000534753 THRAP3Q9Y2W1 955 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-219ENST00000534753 EP400Q96L91 3159 aa12.37□□□□□ -0.43
CCDC90B-219ENST00000534753 COL18A1P39060 1754 aa12.36□□□□□ -0.43
CCDC90B-219ENST00000534753 BAG6P46379 1132 aa12.36□□□□□ -0.43
CCDC90B-219ENST00000534753 AMPHP49418 695 aa12.36□□□□□ -0.43
CCDC90B-219ENST00000534753 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-219ENST00000534753 DDB1Q16531 1140 aa12.36□□□□□ -0.43
CCDC90B-219ENST00000534753 FAM196AQ6ZSG2 479 aa12.36□□□□□ -0.43
CCDC90B-219ENST00000534753 ANKRD24Q8TF21 1146 aa12.36□□□□□ -0.43
CCDC90B-219ENST00000534753 FYB1O15117 783 aa12.35□□□□□ -0.43
CCDC90B-219ENST00000534753 EN1Q05925 392 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-219ENST00000534753 LTN1O94822 1766 aa12.35□□□□□ -0.43
CCDC90B-219ENST00000534753 TIE1P35590 1138 aa12.34□□□□□ -0.43
CCDC90B-219ENST00000534753 RRS1Q15050 365 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-219ENST00000534753 CARD10Q9BWT7 1032 aa12.34□□□□□ -0.43
CCDC90B-219ENST00000534753 CARD14Q9BXL6 1004 aa12.34□□□□□ -0.43
CCDC90B-219ENST00000534753 OVOS2A0A0J9YW53 1432 aa12.34□□□□□ -0.43
CCDC90B-219ENST00000534753 OVOS2Q6IE36 1432 aa12.34□□□□□ -0.43
CCDC90B-219ENST00000534753 APBA3O96018 575 aa12.33□□□□□ -0.44
CCDC90B-219ENST00000534753 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
CCDC90B-219ENST00000534753 IP6K1Q92551 441 aa12.32□□□□□ -0.44
CCDC90B-219ENST00000534753 ERBB3P21860 1342 aa12.32□□□□□ -0.44
CCDC90B-219ENST00000534753 MAP3K19Q56UN5 1328 aa12.32□□□□□ -0.44
CCDC90B-219ENST00000534753 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
CCDC90B-219ENST00000534753 EXOC5O00471 708 aa12.31□□□□□ -0.44
CCDC90B-219ENST00000534753 PPM1GO15355 546 aaPredicted RBP12.31□□□□□ -0.44
CCDC90B-219ENST00000534753 TNNT2P45379 298 aaPredicted RBP12.31□□□□□ -0.44
CCDC90B-219ENST00000534753 LARP6Q9BRS8 491 aaKnown RBP12.31□□□□□ -0.44
CCDC90B-219ENST00000534753 MYOM1P52179 1685 aa12.31□□□□□ -0.44
CCDC90B-219ENST00000534753 HOXC9P31274 260 aa12.3□□□□□ -0.44
CCDC90B-219ENST00000534753 EZH2Q15910 746 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-219ENST00000534753 CDCA7Q9BWT1 371 aaPredicted RBP12.3□□□□□ -0.44
CCDC90B-219ENST00000534753 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
CCDC90B-219ENST00000534753 RGPD1P0DJD0 1748 aa12.3□□□□□ -0.44
CCDC90B-219ENST00000534753 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
CCDC90B-219ENST00000534753 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
CCDC90B-219ENST00000534753 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-219ENST00000534753 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-219ENST00000534753 C11orf95C9JLR9 678 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-219ENST00000534753 E2F4Q16254 413 aa12.29□□□□□ -0.44
CCDC90B-219ENST00000534753 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-219ENST00000534753 PANK3Q9H999 370 aa12.29□□□□□ -0.44
CCDC90B-219ENST00000534753 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC90B-219ENST00000534753 CGNL1Q0VF96 1302 aa12.29□□□□□ -0.44
CCDC90B-219ENST00000534753 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
CCDC90B-219ENST00000534753 ABCC6O95255 1503 aa12.28□□□□□ -0.44
CCDC90B-219ENST00000534753 IL2RBP14784 551 aa12.28□□□□□ -0.44
CCDC90B-219ENST00000534753 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
CCDC90B-219ENST00000534753 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
CCDC90B-219ENST00000534753 DPY19L2Q6NUT2 758 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms