RNA–Protein interactions for RNA: ENST00000534182.2

ARCN1-204, Transcript of archain 1, humanhuman

TSL 5 BASIC

Gene ARCN1, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-204ENST00000534182 DDX54Q8TDD1 881 aaKnown RBP17.74■□□□□ 0.43
ARCN1-204ENST00000534182 EXOC5O00471 708 aa17.74■□□□□ 0.43
ARCN1-204ENST00000534182 RAPGEF4Q8WZA2 1011 aa17.74■□□□□ 0.43
ARCN1-204ENST00000534182 UPF1Q92900 1129 aaKnown RBP eCLIP17.74■□□□□ 0.435e-16■■■■□ 25.5
ARCN1-204ENST00000534182 KDRP35968 1356 aa17.73■□□□□ 0.43
ARCN1-204ENST00000534182 SOCS7O14512 581 aa17.72■□□□□ 0.43
ARCN1-204ENST00000534182 CYP27B1O15528 508 aa17.72■□□□□ 0.43
ARCN1-204ENST00000534182 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
ARCN1-204ENST00000534182 CDCA7Q9BWT1 371 aaPredicted RBP17.72■□□□□ 0.43
ARCN1-204ENST00000534182 SBF2Q86WG5 1849 aa17.72■□□□□ 0.43
ARCN1-204ENST00000534182 ZCRB1Q8TBF4 217 aaKnown RBP17.71■□□□□ 0.43
ARCN1-204ENST00000534182 ACSBG1Q96GR2 724 aa17.71■□□□□ 0.42
ARCN1-204ENST00000534182 TNS1Q9HBL0 1735 aaKnown RBP17.7■□□□□ 0.42
ARCN1-204ENST00000534182 TOGARAM1Q9Y4F4 1720 aa17.7■□□□□ 0.42
ARCN1-204ENST00000534182 KCNQ2O43526 872 aa17.7■□□□□ 0.42
ARCN1-204ENST00000534182 TRIM37O94972 964 aa17.7■□□□□ 0.42
ARCN1-204ENST00000534182 CFAP53Q96M91 514 aa17.7■□□□□ 0.42
ARCN1-204ENST00000534182 DOT1LQ8TEK3 1739 aa17.69■□□□□ 0.42
ARCN1-204ENST00000534182 U2AF1L5P0DN76 240 aaPredicted RBP17.67■□□□□ 0.42
ARCN1-204ENST00000534182 U2AF1Q01081 240 aaKnown RBP eCLIP17.67■□□□□ 0.42
ARCN1-204ENST00000534182 PHACTR3Q96KR7 559 aa17.67■□□□□ 0.42
ARCN1-204ENST00000534182 RSPH6AQ9H0K4 717 aa17.67■□□□□ 0.42
ARCN1-204ENST00000534182 DEFB132Q7Z7B7 95 aa17.67■□□□□ 0.42
ARCN1-204ENST00000534182 PRKAR2BP31323 418 aa17.66■□□□□ 0.42
ARCN1-204ENST00000534182 FAM196AQ6ZSG2 479 aa17.66■□□□□ 0.42
ARCN1-204ENST00000534182 KAT6BQ8WYB5 2073 aa17.66■□□□□ 0.42
ARCN1-204ENST00000534182 ANP32CO43423 234 aa17.65■□□□□ 0.42
ARCN1-204ENST00000534182 PCDH11XQ9BZA7 1347 aa17.65■□□□□ 0.42
ARCN1-204ENST00000534182 PCDH11YQ9BZA8 1340 aa17.65■□□□□ 0.42
ARCN1-204ENST00000534182 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.42
ARCN1-204ENST00000534182 NHSQ6T4R5 1651 aa17.64■□□□□ 0.41
ARCN1-204ENST00000534182 PHKG2P15735 406 aa17.64■□□□□ 0.41
ARCN1-204ENST00000534182 ZNF530Q6P9A1 599 aaPredicted RBP17.63■□□□□ 0.41
ARCN1-204ENST00000534182 KDM6AO15550 1401 aaPredicted RBP17.63■□□□□ 0.41
ARCN1-204ENST00000534182 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
ARCN1-204ENST00000534182 BCL9O00512 1426 aa17.62■□□□□ 0.41
ARCN1-204ENST00000534182 SPG7Q9UQ90 795 aa17.61■□□□□ 0.41
ARCN1-204ENST00000534182 NUDCQ9Y266 331 aa17.61■□□□□ 0.41
ARCN1-204ENST00000534182 BTAF1O14981 1849 aa17.61■□□□□ 0.41
ARCN1-204ENST00000534182 PRIM1P49642 420 aaKnown RBP17.61■□□□□ 0.41
ARCN1-204ENST00000534182 CCDC146Q8IYE0 955 aa17.61■□□□□ 0.41
ARCN1-204ENST00000534182 ITGB4P16144 1822 aa17.6■□□□□ 0.41
ARCN1-204ENST00000534182 EN1Q05925 392 aaPredicted RBP17.6■□□□□ 0.41
ARCN1-204ENST00000534182 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
ARCN1-204ENST00000534182 MPRIPQ6WCQ1 1025 aa17.6■□□□□ 0.41
ARCN1-204ENST00000534182 SYTL4Q96C24 671 aaPredicted RBP17.6■□□□□ 0.41
ARCN1-204ENST00000534182 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
ARCN1-204ENST00000534182 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.414e-8■■□□□ 14.4
ARCN1-204ENST00000534182 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
ARCN1-204ENST00000534182 ADAMTS8Q9UP79 889 aa17.59■□□□□ 0.41
ARCN1-204ENST00000534182 IFNL2Q8IZJ0 200 aa17.58■□□□□ 0.41
ARCN1-204ENST00000534182 LGR6Q9HBX8 967 aa17.58■□□□□ 0.41
ARCN1-204ENST00000534182 APBA3O96018 575 aa17.58■□□□□ 0.4
ARCN1-204ENST00000534182 NKX1-1Q15270 411 aaPredicted RBP17.58■□□□□ 0.4
ARCN1-204ENST00000534182 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
ARCN1-204ENST00000534182 FCHSD2O94868 740 aa17.57■□□□□ 0.4
ARCN1-204ENST00000534182 BCL11BQ9C0K0 894 aaPredicted RBP17.57■□□□□ 0.4
ARCN1-204ENST00000534182 MRS2Q9HD23 443 aa17.57■□□□□ 0.4
ARCN1-204ENST00000534182 EZH2Q15910 746 aaKnown RBP17.56■□□□□ 0.4
ARCN1-204ENST00000534182 AMOTQ4VCS5 1084 aa17.56■□□□□ 0.4
ARCN1-204ENST00000534182 DLG5Q8TDM6 1919 aa17.56■□□□□ 0.4
ARCN1-204ENST00000534182 KCNQ4P56696 695 aa17.55■□□□□ 0.4
ARCN1-204ENST00000534182 SCN11AQ9UI33 1791 aa17.55■□□□□ 0.4
ARCN1-204ENST00000534182 MIER1Q8N108 512 aa17.55■□□□□ 0.4
ARCN1-204ENST00000534182 ADAMTS7Q9UKP4 1686 aa17.54■□□□□ 0.4
ARCN1-204ENST00000534182 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
ARCN1-204ENST00000534182 PROM2Q8N271 834 aa17.54■□□□□ 0.4
ARCN1-204ENST00000534182 PIGBQ92521 554 aa17.54■□□□□ 0.4
ARCN1-204ENST00000534182 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
ARCN1-204ENST00000534182 PLEKHG2Q9H7P9 1386 aa17.53■□□□□ 0.4
ARCN1-204ENST00000534182 WDR43Q15061 677 aaKnown RBP eCLIP17.53■□□□□ 0.4
ARCN1-204ENST00000534182 AKAP4Q5JQC9 854 aa17.53■□□□□ 0.4
ARCN1-204ENST00000534182 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
ARCN1-204ENST00000534182 PNISRQ8TF01 805 aaKnown RBP17.53■□□□□ 0.4
ARCN1-204ENST00000534182 CAMKK2Q96RR4 588 aa17.53■□□□□ 0.4
ARCN1-204ENST00000534182 IL17REQ8NFR9 667 aa17.52■□□□□ 0.4
ARCN1-204ENST00000534182 MAP3K5Q99683 1374 aa17.52■□□□□ 0.4
ARCN1-204ENST00000534182 SF3B2Q13435 895 aaKnown RBP17.52■□□□□ 0.39
ARCN1-204ENST00000534182 MCM10Q7L590 875 aa17.52■□□□□ 0.39
ARCN1-204ENST00000534182 RREB1Q92766 1687 aa17.51■□□□□ 0.39
ARCN1-204ENST00000534182 RNMTO43148 476 aaKnown RBP17.51■□□□□ 0.39
ARCN1-204ENST00000534182 DCAF5Q96JK2 942 aa17.51■□□□□ 0.39
ARCN1-204ENST00000534182 THUMPD2Q9BTF0 503 aaKnown RBP17.51■□□□□ 0.39
ARCN1-204ENST00000534182 NUP188Q5SRE5 1749 aa17.5■□□□□ 0.39
ARCN1-204ENST00000534182 BAG6P46379 1132 aa17.5■□□□□ 0.39
ARCN1-204ENST00000534182 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
ARCN1-204ENST00000534182 NFATC2IPQ8NCF5 419 aa17.5■□□□□ 0.39
ARCN1-204ENST00000534182 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
ARCN1-204ENST00000534182 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
ARCN1-204ENST00000534182 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
ARCN1-204ENST00000534182 LRRC4BQ9NT99 713 aa17.48■□□□□ 0.39
ARCN1-204ENST00000534182 MRC1P22897 1456 aa17.48■□□□□ 0.39
ARCN1-204ENST00000534182 LY75O60449 1722 aa17.48■□□□□ 0.39
ARCN1-204ENST00000534182 NEUROD2Q15784 382 aa17.48■□□□□ 0.39
ARCN1-204ENST00000534182 TMOD3Q9NYL9 352 aa17.48■□□□□ 0.39
ARCN1-204ENST00000534182 SIPA1L3O60292 1781 aaPredicted RBP17.47■□□□□ 0.39
ARCN1-204ENST00000534182 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
ARCN1-204ENST00000534182 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
ARCN1-204ENST00000534182 ATG3Q9NT62 314 aa17.47■□□□□ 0.39
ARCN1-204ENST00000534182 RGPD3A6NKT7 1758 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms