RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 NSD2O96028 1365 aa29.94■■■□□ 2.38
SSH3-211ENST00000534112 RRS1Q15050 365 aaKnown RBP29.94■■■□□ 2.38
SSH3-211ENST00000534112 FAM208AQ9UK61 1670 aaKnown RBP29.94■■■□□ 2.38
SSH3-211ENST00000534112 FYB1O15117 783 aa29.93■■■□□ 2.38
SSH3-211ENST00000534112 GPR162Q16538 588 aa29.93■■■□□ 2.38
SSH3-211ENST00000534112 NBPF6Q5VWK0 638 aa29.93■■■□□ 2.38
SSH3-211ENST00000534112 NBPF4Q96M43 638 aa29.93■■■□□ 2.38
SSH3-211ENST00000534112 MEGF6O75095 1541 aa29.92■■■□□ 2.38
SSH3-211ENST00000534112 KLHL34Q8N239 644 aa29.91■■■□□ 2.38
SSH3-211ENST00000534112 GGNBP2Q9H3C7 697 aa29.91■■■□□ 2.38
SSH3-211ENST00000534112 RTL1A6NKG5 1358 aa29.9■■■□□ 2.38
SSH3-211ENST00000534112 CCNL1Q9UK58 526 aaPredicted RBP29.9■■■□□ 2.38
SSH3-211ENST00000534112 USHBP1Q8N6Y0 703 aa29.89■■■□□ 2.38
SSH3-211ENST00000534112 CGNL1Q0VF96 1302 aa29.88■■■□□ 2.37
SSH3-211ENST00000534112 TMF1P82094 1093 aa29.87■■■□□ 2.37
SSH3-211ENST00000534112 RAPGEF4Q8WZA2 1011 aa29.87■■■□□ 2.37
SSH3-211ENST00000534112 GOLGB1Q14789 3259 aaKnown RBP29.87■■■□□ 2.37
SSH3-211ENST00000534112 USP47Q96K76 1375 aa29.85■■■□□ 2.37
SSH3-211ENST00000534112 HSP90AB2PQ58FF8 381 aa29.83■■■□□ 2.37
SSH3-211ENST00000534112 QSER1Q2KHR3 1735 aa29.82■■■□□ 2.36
SSH3-211ENST00000534112 DOT1LQ8TEK3 1739 aa29.82■■■□□ 2.36
SSH3-211ENST00000534112 SMG6Q86US8 1419 aaKnown RBP29.82■■■□□ 2.36
SSH3-211ENST00000534112 TATP17735 454 aaPredicted RBP29.82■■■□□ 2.36
SSH3-211ENST00000534112 COL23A1Q86Y22 540 aaPredicted RBP29.82■■■□□ 2.36
SSH3-211ENST00000534112 PELP1Q8IZL8 1130 aaKnown RBP29.82■■■□□ 2.36
SSH3-211ENST00000534112 NLGN2Q8NFZ4 835 aa29.82■■■□□ 2.36
SSH3-211ENST00000534112 RGPD2P0DJD1 1756 aa29.82■■■□□ 2.36
SSH3-211ENST00000534112 MSH5O43196 834 aa29.81■■■□□ 2.36
SSH3-211ENST00000534112 CHD4Q14839 1912 aa29.81■■■□□ 2.36
SSH3-211ENST00000534112 INSRP06213 1382 aa29.8■■■□□ 2.36
SSH3-211ENST00000534112 SHANK3Q9BYB0 1731 aa29.8■■■□□ 2.36
SSH3-211ENST00000534112 LY75O60449 1722 aa29.79■■■□□ 2.36
SSH3-211ENST00000534112 C1QTNF8P60827 252 aa29.78■■■□□ 2.36
SSH3-211ENST00000534112 COL24A1Q17RW2 1714 aa29.78■■■□□ 2.36
SSH3-211ENST00000534112 PCDH11XQ9BZA7 1347 aa29.76■■■□□ 2.36
SSH3-211ENST00000534112 PCDH11YQ9BZA8 1340 aa29.76■■■□□ 2.36
SSH3-211ENST00000534112 CDCA8Q53HL2 280 aa29.76■■■□□ 2.35
SSH3-211ENST00000534112 FLT4P35916 1363 aa29.76■■■□□ 2.35
SSH3-211ENST00000534112 TUBGCP6Q96RT7 1819 aa29.75■■■□□ 2.35
SSH3-211ENST00000534112 KIF24Q5T7B8 1368 aa29.75■■■□□ 2.35
SSH3-211ENST00000534112 CYP27B1O15528 508 aa29.73■■■□□ 2.35
SSH3-211ENST00000534112 MSL1Q68DK7 614 aa29.73■■■□□ 2.35
SSH3-211ENST00000534112 MPRIPQ6WCQ1 1025 aa29.73■■■□□ 2.35
SSH3-211ENST00000534112 CARD14Q9BXL6 1004 aa29.73■■■□□ 2.35
SSH3-211ENST00000534112 HMGB2P26583 209 aaKnown RBP29.72■■■□□ 2.35
SSH3-211ENST00000534112 SENP3-EIF4A1A0A087X0R7 540 aa29.71■■■□□ 2.35
SSH3-211ENST00000534112 PALLDQ8WX93 1383 aa29.71■■■□□ 2.35
SSH3-211ENST00000534112 GRIN3BO60391 1043 aa29.7■■■□□ 2.35
SSH3-211ENST00000534112 YBX3P16989 372 aaKnown RBP eCLIP29.7■■■□□ 2.35
SSH3-211ENST00000534112 EMILIN1Q9Y6C2 1016 aa29.7■■■□□ 2.35
SSH3-211ENST00000534112 FLAD1Q8NFF5 587 aa29.69■■■□□ 2.34
SSH3-211ENST00000534112 SMARCC1Q92922 1105 aaPredicted RBP29.66■■■□□ 2.34
SSH3-211ENST00000534112 GIGYF1O75420 1035 aaPredicted RBP29.65■■■□□ 2.34
SSH3-211ENST00000534112 NSD3Q9BZ95 1437 aa29.64■■■□□ 2.34
SSH3-211ENST00000534112 PPM1GO15355 546 aaPredicted RBP29.64■■■□□ 2.34
SSH3-211ENST00000534112 PIGBQ92521 554 aa29.64■■■□□ 2.34
SSH3-211ENST00000534112 CD2APQ9Y5K6 639 aa29.64■■■□□ 2.34
SSH3-211ENST00000534112 NKX1-1Q15270 411 aaPredicted RBP29.63■■■□□ 2.33
SSH3-211ENST00000534112 AK7Q96M32 723 aa29.62■■■□□ 2.33
SSH3-211ENST00000534112 SPG7Q9UQ90 795 aa29.61■■■□□ 2.33
SSH3-211ENST00000534112 AMIGO3Q86WK7 504 aa29.6■■■□□ 2.33
SSH3-211ENST00000534112 C5P01031 1676 aa29.6■■■□□ 2.33
SSH3-211ENST00000534112 KIF20BQ96Q89 1820 aa29.59■■■□□ 2.33
SSH3-211ENST00000534112 WASHC2AQ641Q2 1341 aa29.59■■■□□ 2.33
SSH3-211ENST00000534112 NCAPD2Q15021 1401 aa29.59■■■□□ 2.33
SSH3-211ENST00000534112 EYA1Q99502 592 aa29.57■■■□□ 2.32
SSH3-211ENST00000534112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.56■■■□□ 2.32
SSH3-211ENST00000534112 TRIM26Q12899 539 aaPredicted RBP29.56■■■□□ 2.32
SSH3-211ENST00000534112 SMIM5Q71RC9 77 aa29.56■■■□□ 2.32
SSH3-211ENST00000534112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.56■■■□□ 2.32
SSH3-211ENST00000534112 LOC102724428A0A0B4J2F2 783 aa29.55■■■□□ 2.32
SSH3-211ENST00000534112 PHF14O94880 888 aa29.55■■■□□ 2.32
SSH3-211ENST00000534112 SIK1P57059 783 aa29.55■■■□□ 2.32
SSH3-211ENST00000534112 TOGARAM1Q9Y4F4 1720 aa29.54■■■□□ 2.32
SSH3-211ENST00000534112 TMOD3Q9NYL9 352 aa29.53■■■□□ 2.32
SSH3-211ENST00000534112 POLKQ9UBT6 870 aa29.53■■■□□ 2.32
SSH3-211ENST00000534112 C4BP0C0L5 1744 aa29.52■■■□□ 2.32
SSH3-211ENST00000534112 LINC00116Q8NCU8 138 aa29.52■■■□□ 2.32
SSH3-211ENST00000534112 TAF1LQ8IZX4 1826 aa29.52■■■□□ 2.32
SSH3-211ENST00000534112 PKD1L3Q7Z443 1732 aa29.51■■■□□ 2.32
SSH3-211ENST00000534112 SSFA2P28290 1259 aa29.51■■■□□ 2.31
SSH3-211ENST00000534112 ASAP1Q9ULH1 1129 aa29.51■■■□□ 2.31
SSH3-211ENST00000534112 IFNL2Q8IZJ0 200 aa29.5■■■□□ 2.31
SSH3-211ENST00000534112 PHKG2P15735 406 aa29.49■■■□□ 2.31
SSH3-211ENST00000534112 TIMELESSQ9UNS1 1208 aa29.49■■■□□ 2.31
SSH3-211ENST00000534112 ITGB4P16144 1822 aa29.49■■■□□ 2.31
SSH3-211ENST00000534112 ATP10DQ9P241 1426 aa29.48■■■□□ 2.31
SSH3-211ENST00000534112 ITPK1Q13572 414 aa29.47■■■□□ 2.31
SSH3-211ENST00000534112 ATP6V1AP38606 617 aa29.46■■■□□ 2.31
SSH3-211ENST00000534112 CEP350Q5VT06 3117 aa29.46■■■□□ 2.31
SSH3-211ENST00000534112 IGSF1Q8N6C5 1336 aa29.45■■■□□ 2.31
SSH3-211ENST00000534112 GNPATO15228 680 aa29.45■■■□□ 2.31
SSH3-211ENST00000534112 TNNT2P45379 298 aaPredicted RBP29.45■■■□□ 2.31
SSH3-211ENST00000534112 EIF4A2Q14240 407 aaKnown RBP29.45■■■□□ 2.31
SSH3-211ENST00000534112 ATG3Q9NT62 314 aa29.45■■■□□ 2.31
SSH3-211ENST00000534112 POLR3GLQ9BT43 218 aa29.44■■■□□ 2.3
SSH3-211ENST00000534112 WWC3Q9ULE0 1092 aa29.43■■■□□ 2.3
SSH3-211ENST00000534112 ANKRD26Q9UPS8 1709 aa29.42■■■□□ 2.3
SSH3-211ENST00000534112 UBR3Q6ZT12 1888 aa29.42■■■□□ 2.3
SSH3-211ENST00000534112 GPBP1L1Q9HC44 474 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms