RNA–Protein interactions for RNA: ENST00000534018.5

GSDMD-215, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-215ENST00000534018 RTL1A6NKG5 1358 aa23.2■■□□□ 1.3
GSDMD-215ENST00000534018 ARXQ96QS3 562 aa23.2■■□□□ 1.3
GSDMD-215ENST00000534018 RRS1Q15050 365 aaKnown RBP23.19■■□□□ 1.3
GSDMD-215ENST00000534018 AKT1S1Q96B36 256 aa23.19■■□□□ 1.3
GSDMD-215ENST00000534018 NSD2O96028 1365 aa23.18■■□□□ 1.3
GSDMD-215ENST00000534018 SLC24A1O60721 1099 aa23.18■■□□□ 1.3
GSDMD-215ENST00000534018 KCNQ4P56696 695 aa23.18■■□□□ 1.3
GSDMD-215ENST00000534018 SLC27A3Q5K4L6 730 aa23.18■■□□□ 1.3
GSDMD-215ENST00000534018 USP47Q96K76 1375 aa23.17■■□□□ 1.3
GSDMD-215ENST00000534018 PRIM1P49642 420 aaKnown RBP23.17■■□□□ 1.3
GSDMD-215ENST00000534018 GGNBP2Q9H3C7 697 aa23.17■■□□□ 1.3
GSDMD-215ENST00000534018 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
GSDMD-215ENST00000534018 TMF1P82094 1093 aa23.15■■□□□ 1.3
GSDMD-215ENST00000534018 USHBP1Q8N6Y0 703 aa23.15■■□□□ 1.3
GSDMD-215ENST00000534018 SMG6Q86US8 1419 aaKnown RBP23.15■■□□□ 1.3
GSDMD-215ENST00000534018 MAP3K5Q99683 1374 aa23.14■■□□□ 1.3
GSDMD-215ENST00000534018 PNPLA7Q6ZV29 1317 aa23.14■■□□□ 1.3
GSDMD-215ENST00000534018 C5P01031 1676 aa23.14■■□□□ 1.29
GSDMD-215ENST00000534018 FYB1O15117 783 aa23.14■■□□□ 1.29
GSDMD-215ENST00000534018 NBPF6Q5VWK0 638 aa23.14■■□□□ 1.29
GSDMD-215ENST00000534018 NBPF4Q96M43 638 aa23.14■■□□□ 1.29
GSDMD-215ENST00000534018 TAF1LQ8IZX4 1826 aa23.12■■□□□ 1.29
GSDMD-215ENST00000534018 KLHL34Q8N239 644 aa23.12■■□□□ 1.29
GSDMD-215ENST00000534018 TFCP2L1Q9NZI6 479 aa23.12■■□□□ 1.29
GSDMD-215ENST00000534018 ITGB4P16144 1822 aa23.11■■□□□ 1.29
GSDMD-215ENST00000534018 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
GSDMD-215ENST00000534018 ZNF784Q8NCA9 323 aaPredicted RBP23.1■■□□□ 1.29
GSDMD-215ENST00000534018 SLC16A10Q8TF71 515 aa23.1■■□□□ 1.29
GSDMD-215ENST00000534018 POLD1P28340 1107 aa23.09■■□□□ 1.29
GSDMD-215ENST00000534018 RAPGEF4Q8WZA2 1011 aa23.09■■□□□ 1.29
GSDMD-215ENST00000534018 CCNL1Q9UK58 526 aaPredicted RBP23.09■■□□□ 1.29
GSDMD-215ENST00000534018 PKD1L3Q7Z443 1732 aa23.08■■□□□ 1.29
GSDMD-215ENST00000534018 ANKRD26Q9UPS8 1709 aa23.08■■□□□ 1.29
GSDMD-215ENST00000534018 CGNL1Q0VF96 1302 aa23.08■■□□□ 1.28
GSDMD-215ENST00000534018 CLSPNQ9HAW4 1339 aa23.08■■□□□ 1.28
GSDMD-215ENST00000534018 GOLGB1Q14789 3259 aaKnown RBP23.07■■□□□ 1.28
GSDMD-215ENST00000534018 INSRP06213 1382 aa23.07■■□□□ 1.28
GSDMD-215ENST00000534018 FLT4P35916 1363 aa23.07■■□□□ 1.28
GSDMD-215ENST00000534018 HSP90AB2PQ58FF8 381 aa23.07■■□□□ 1.28
GSDMD-215ENST00000534018 MAP2P11137 1827 aaKnown RBP23.06■■□□□ 1.28
GSDMD-215ENST00000534018 TATP17735 454 aaPredicted RBP23.06■■□□□ 1.28
GSDMD-215ENST00000534018 GPR162Q16538 588 aa23.05■■□□□ 1.28
GSDMD-215ENST00000534018 TIMELESSQ9UNS1 1208 aa23.05■■□□□ 1.28
GSDMD-215ENST00000534018 CDCA8Q53HL2 280 aa23.04■■□□□ 1.28
GSDMD-215ENST00000534018 NSD3Q9BZ95 1437 aa23.04■■□□□ 1.28
GSDMD-215ENST00000534018 PCDH11XQ9BZA7 1347 aa23.04■■□□□ 1.28
GSDMD-215ENST00000534018 PCDH11YQ9BZA8 1340 aa23.04■■□□□ 1.28
GSDMD-215ENST00000534018 MSH5O43196 834 aa23.03■■□□□ 1.28
GSDMD-215ENST00000534018 KIF24Q5T7B8 1368 aa23.02■■□□□ 1.28
GSDMD-215ENST00000534018 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
GSDMD-215ENST00000534018 NLGN2Q8NFZ4 835 aa23.01■■□□□ 1.27
GSDMD-215ENST00000534018 EMILIN1Q9Y6C2 1016 aa23.01■■□□□ 1.27
GSDMD-215ENST00000534018 C4BP0C0L5 1744 aa23.01■■□□□ 1.27
GSDMD-215ENST00000534018 COL23A1Q86Y22 540 aaPredicted RBP23■■□□□ 1.27
GSDMD-215ENST00000534018 CARD14Q9BXL6 1004 aa23■■□□□ 1.27
GSDMD-215ENST00000534018 PALLDQ8WX93 1383 aa22.99■■□□□ 1.27
GSDMD-215ENST00000534018 UBR3Q6ZT12 1888 aa22.98■■□□□ 1.27
GSDMD-215ENST00000534018 MSL1Q68DK7 614 aa22.98■■□□□ 1.27
GSDMD-215ENST00000534018 MPRIPQ6WCQ1 1025 aa22.98■■□□□ 1.27
GSDMD-215ENST00000534018 CYP27B1O15528 508 aa22.97■■□□□ 1.27
GSDMD-215ENST00000534018 PPM1GO15355 546 aaPredicted RBP22.96■■□□□ 1.27
GSDMD-215ENST00000534018 NCAPD2Q15021 1401 aa22.95■■□□□ 1.26
GSDMD-215ENST00000534018 YBX3P16989 372 aaKnown RBP eCLIP22.9■■□□□ 1.26
GSDMD-215ENST00000534018 WASHC2AQ641Q2 1341 aa22.88■■□□□ 1.25
GSDMD-215ENST00000534018 FLAD1Q8NFF5 587 aa22.88■■□□□ 1.25
GSDMD-215ENST00000534018 PIGBQ92521 554 aa22.88■■□□□ 1.25
GSDMD-215ENST00000534018 SMARCC1Q92922 1105 aaPredicted RBP22.88■■□□□ 1.25
GSDMD-215ENST00000534018 AK7Q96M32 723 aa22.88■■□□□ 1.25
GSDMD-215ENST00000534018 POLR3GLQ9BT43 218 aa22.88■■□□□ 1.25
GSDMD-215ENST00000534018 SPG7Q9UQ90 795 aa22.88■■□□□ 1.25
GSDMD-215ENST00000534018 C1QTNF8P60827 252 aa22.87■■□□□ 1.25
GSDMD-215ENST00000534018 AMIGO3Q86WK7 504 aa22.87■■□□□ 1.25
GSDMD-215ENST00000534018 EYA1Q99502 592 aa22.87■■□□□ 1.25
GSDMD-215ENST00000534018 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
GSDMD-215ENST00000534018 PHF14O94880 888 aa22.86■■□□□ 1.25
GSDMD-215ENST00000534018 HMGB2P26583 209 aaKnown RBP22.86■■□□□ 1.25
GSDMD-215ENST00000534018 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
GSDMD-215ENST00000534018 SMIM5Q71RC9 77 aa22.85■■□□□ 1.25
GSDMD-215ENST00000534018 CCER1Q8TC90 406 aaPredicted RBP22.85■■□□□ 1.25
GSDMD-215ENST00000534018 GRIN3BO60391 1043 aa22.84■■□□□ 1.25
GSDMD-215ENST00000534018 POLKQ9UBT6 870 aa22.84■■□□□ 1.25
GSDMD-215ENST00000534018 GIGYF1O75420 1035 aaPredicted RBP22.83■■□□□ 1.25
GSDMD-215ENST00000534018 TNNT2P45379 298 aaPredicted RBP22.83■■□□□ 1.25
GSDMD-215ENST00000534018 TMOD3Q9NYL9 352 aa22.83■■□□□ 1.25
GSDMD-215ENST00000534018 CD2APQ9Y5K6 639 aa22.82■■□□□ 1.24
GSDMD-215ENST00000534018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.81■■□□□ 1.24
GSDMD-215ENST00000534018 LOC102724428A0A0B4J2F2 783 aa22.81■■□□□ 1.24
GSDMD-215ENST00000534018 SIK1P57059 783 aa22.81■■□□□ 1.24
GSDMD-215ENST00000534018 LINC00116Q8NCU8 138 aa22.81■■□□□ 1.24
GSDMD-215ENST00000534018 PHKG2P15735 406 aa22.8■■□□□ 1.24
GSDMD-215ENST00000534018 EIF4A2Q14240 407 aaKnown RBP22.8■■□□□ 1.24
GSDMD-215ENST00000534018 IFNL2Q8IZJ0 200 aa22.8■■□□□ 1.24
GSDMD-215ENST00000534018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.8■■□□□ 1.24
GSDMD-215ENST00000534018 ASAP1Q9ULH1 1129 aa22.8■■□□□ 1.24
GSDMD-215ENST00000534018 COL5A3P25940 1745 aaPredicted RBP22.79■■□□□ 1.24
GSDMD-215ENST00000534018 SSFA2P28290 1259 aa22.78■■□□□ 1.24
GSDMD-215ENST00000534018 ZNF831Q5JPB2 1677 aa22.77■■□□□ 1.24
GSDMD-215ENST00000534018 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
GSDMD-215ENST00000534018 ITPK1Q13572 414 aa22.77■■□□□ 1.24
GSDMD-215ENST00000534018 WWC3Q9ULE0 1092 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms