RNA–Protein interactions for RNA: ENST00000533860.5

APLP2-222, Transcript of amyloid beta precursor like protein 2, humanhuman

TSL 1 (best)

Gene APLP2, Length 1,424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLP2-222ENST00000533860 LMOD3Q0VAK6 560 aa20.46■□□□□ 0.87
APLP2-222ENST00000533860 TSR2Q969E8 191 aaKnown RBP20.46■□□□□ 0.87
APLP2-222ENST00000533860 PKD1L3Q7Z443 1732 aa20.46■□□□□ 0.87
APLP2-222ENST00000533860 CRB1P82279 1406 aa20.45■□□□□ 0.86
APLP2-222ENST00000533860 EVA1CP58658 441 aa20.45■□□□□ 0.86
APLP2-222ENST00000533860 CARD10Q9BWT7 1032 aa20.45■□□□□ 0.86
APLP2-222ENST00000533860 MAP3K5Q99683 1374 aa20.45■□□□□ 0.86
APLP2-222ENST00000533860 FANCIQ9NVI1 1328 aa20.45■□□□□ 0.86
APLP2-222ENST00000533860 ZNF853P0CG23 659 aa20.44■□□□□ 0.86
APLP2-222ENST00000533860 PLEKHO1Q53GL0 409 aaPredicted RBP20.44■□□□□ 0.86
APLP2-222ENST00000533860 SLIT2O94813 1529 aa20.44■□□□□ 0.86
APLP2-222ENST00000533860 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
APLP2-222ENST00000533860 VIRMAQ69YN4 1812 aaKnown RBP20.44■□□□□ 0.86
APLP2-222ENST00000533860 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
APLP2-222ENST00000533860 RAPGEF4Q8WZA2 1011 aa20.44■□□□□ 0.86
APLP2-222ENST00000533860 NWD2Q9ULI1 1742 aa20.44■□□□□ 0.86
APLP2-222ENST00000533860 GNAT3A8MTJ3 354 aa20.43■□□□□ 0.86
APLP2-222ENST00000533860 TATP17735 454 aaPredicted RBP20.43■□□□□ 0.86
APLP2-222ENST00000533860 IL17REQ8NFR9 667 aa20.43■□□□□ 0.86
APLP2-222ENST00000533860 OVOS2A0A0G2JMS6 1433 aa20.42■□□□□ 0.86
APLP2-222ENST00000533860 AMOTQ4VCS5 1084 aa20.42■□□□□ 0.86
APLP2-222ENST00000533860 SHANK3Q9BYB0 1731 aa20.42■□□□□ 0.86
APLP2-222ENST00000533860 SPATA31A6Q5VVP1 1343 aa20.41■□□□□ 0.86
APLP2-222ENST00000533860 WNK3Q9BYP7 1800 aa20.41■□□□□ 0.86
APLP2-222ENST00000533860 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
APLP2-222ENST00000533860 MYH16Q9H6N6 1097 aa20.41■□□□□ 0.86
APLP2-222ENST00000533860 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
APLP2-222ENST00000533860 ADAMTS7Q9UKP4 1686 aa20.4■□□□□ 0.86
APLP2-222ENST00000533860 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
APLP2-222ENST00000533860 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
APLP2-222ENST00000533860 LAS1LQ9Y4W2 734 aaKnown RBP20.4■□□□□ 0.86
APLP2-222ENST00000533860 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
APLP2-222ENST00000533860 EXOSC9Q06265 439 aaKnown RBP20.39■□□□□ 0.85
APLP2-222ENST00000533860 RTF1Q92541 710 aaKnown RBP20.39■□□□□ 0.85
APLP2-222ENST00000533860 LGR6Q9HBX8 967 aa20.39■□□□□ 0.85
APLP2-222ENST00000533860 GTF3C3Q9Y5Q9 886 aa20.39■□□□□ 0.85
APLP2-222ENST00000533860 DISP2A7MBM2 1401 aa20.39■□□□□ 0.85
APLP2-222ENST00000533860 PLEKHG2Q9H7P9 1386 aa20.38■□□□□ 0.85
APLP2-222ENST00000533860 GNAI1P63096 354 aa20.38■□□□□ 0.85
APLP2-222ENST00000533860 CALD1Q05682 793 aaKnown RBP20.38■□□□□ 0.85
APLP2-222ENST00000533860 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
APLP2-222ENST00000533860 MBIPQ9NS73 344 aa20.38■□□□□ 0.85
APLP2-222ENST00000533860 CEMIPQ8WUJ3 1361 aa20.38■□□□□ 0.85
APLP2-222ENST00000533860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.37■□□□□ 0.857e-21■■□□□ 12.1
APLP2-222ENST00000533860 USP35Q9P2H5 1018 aa20.37■□□□□ 0.85
APLP2-222ENST00000533860 CYP27B1O15528 508 aa20.36■□□□□ 0.85
APLP2-222ENST00000533860 IL2RBP14784 551 aa20.36■□□□□ 0.85
APLP2-222ENST00000533860 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
APLP2-222ENST00000533860 KDM6AO15550 1401 aaPredicted RBP20.36■□□□□ 0.85
APLP2-222ENST00000533860 BCL9LQ86UU0 1499 aa20.36■□□□□ 0.85
APLP2-222ENST00000533860 CHL1O00533 1208 aa20.36■□□□□ 0.85
APLP2-222ENST00000533860 RNMTO43148 476 aaKnown RBP20.36■□□□□ 0.85
APLP2-222ENST00000533860 PHKG2P15735 406 aa20.36■□□□□ 0.85
APLP2-222ENST00000533860 C8orf37Q96NL8 207 aa20.36■□□□□ 0.85
APLP2-222ENST00000533860 SPG7Q9UQ90 795 aa20.36■□□□□ 0.85
APLP2-222ENST00000533860 SCN11AQ9UI33 1791 aa20.35■□□□□ 0.85
APLP2-222ENST00000533860 SIPA1L3O60292 1781 aaPredicted RBP20.35■□□□□ 0.85
APLP2-222ENST00000533860 C1orf141Q5JVX7 400 aa20.35■□□□□ 0.85
APLP2-222ENST00000533860 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
APLP2-222ENST00000533860 SPATA31A1Q5TZJ5 1347 aa20.34■□□□□ 0.85
APLP2-222ENST00000533860 IRX6P78412 446 aaPredicted RBP20.33■□□□□ 0.84
APLP2-222ENST00000533860 ZCRB1Q8TBF4 217 aaKnown RBP20.33■□□□□ 0.84
APLP2-222ENST00000533860 NGLY1Q96IV0 654 aa20.33■□□□□ 0.84
APLP2-222ENST00000533860 FNBP4Q8N3X1 1017 aaPredicted RBP20.32■□□□□ 0.84
APLP2-222ENST00000533860 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
APLP2-222ENST00000533860 SPATA31A5Q5VU36 1347 aa20.32■□□□□ 0.84
APLP2-222ENST00000533860 SPATA31A7Q8IWB4 1347 aa20.32■□□□□ 0.84
APLP2-222ENST00000533860 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.32■□□□□ 0.84
APLP2-222ENST00000533860 KDM3BQ7LBC6 1761 aa20.32■□□□□ 0.84
APLP2-222ENST00000533860 RRP1P56182 461 aaKnown RBP20.31■□□□□ 0.84
APLP2-222ENST00000533860 KRT24Q2M2I5 525 aa20.31■□□□□ 0.84
APLP2-222ENST00000533860 UNC5CLQ8IV45 518 aa20.31■□□□□ 0.84
APLP2-222ENST00000533860 IFNL2Q8IZJ0 200 aa20.31■□□□□ 0.84
APLP2-222ENST00000533860 BCAR3O75815 825 aa20.3■□□□□ 0.84
APLP2-222ENST00000533860 C8orf58Q8NAV2 365 aa20.3■□□□□ 0.84
APLP2-222ENST00000533860 RARSP54136 660 aaKnown RBP20.29■□□□□ 0.84
APLP2-222ENST00000533860 FKBP8Q14318 412 aa20.28■□□□□ 0.84
APLP2-222ENST00000533860 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
APLP2-222ENST00000533860 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
APLP2-222ENST00000533860 TOGARAM1Q9Y4F4 1720 aa20.28■□□□□ 0.84
APLP2-222ENST00000533860 PCDH11XQ9BZA7 1347 aa20.28■□□□□ 0.84
APLP2-222ENST00000533860 PCDH11YQ9BZA8 1340 aa20.28■□□□□ 0.84
APLP2-222ENST00000533860 PLIN1O60240 522 aa20.27■□□□□ 0.84
APLP2-222ENST00000533860 MRC1P22897 1456 aa20.27■□□□□ 0.84
APLP2-222ENST00000533860 ELL2O00472 640 aaPredicted RBP20.27■□□□□ 0.83
APLP2-222ENST00000533860 VAMP4O75379 141 aa20.27■□□□□ 0.83
APLP2-222ENST00000533860 VPS72Q15906 364 aa20.27■□□□□ 0.83
APLP2-222ENST00000533860 KCNQ3O43525 872 aa20.26■□□□□ 0.83
APLP2-222ENST00000533860 CT47B1P0C2W7 299 aaPredicted RBP20.26■□□□□ 0.83
APLP2-222ENST00000533860 USP21Q9UK80 565 aa20.26■□□□□ 0.83
APLP2-222ENST00000533860 AFF2P51816 1311 aa20.25■□□□□ 0.83
APLP2-222ENST00000533860 TEFQ10587 303 aa20.25■□□□□ 0.83
APLP2-222ENST00000533860 NKX1-1Q15270 411 aaPredicted RBP20.25■□□□□ 0.83
APLP2-222ENST00000533860 MEX3CQ5U5Q3 659 aaKnown RBP20.25■□□□□ 0.83
APLP2-222ENST00000533860 DDX54Q8TDD1 881 aaKnown RBP20.25■□□□□ 0.83
APLP2-222ENST00000533860 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
APLP2-222ENST00000533860 THRAP3Q9Y2W1 955 aaKnown RBP20.25■□□□□ 0.83
APLP2-222ENST00000533860 CCDC9Q9Y3X0 531 aaKnown RBP20.25■□□□□ 0.83
APLP2-222ENST00000533860 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
APLP2-222ENST00000533860 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms