RNA–Protein interactions for RNA: ENST00000532460.5

CSRP1-216, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSRP1, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-216ENST00000532460 FKBP8Q14318 412 aa14.75□□□□□ -0.05
CSRP1-216ENST00000532460 LRRC37A3O60309 1634 aa14.74□□□□□ -0.05
CSRP1-216ENST00000532460 PEAK1Q9H792 1746 aa14.74□□□□□ -0.05
CSRP1-216ENST00000532460 AMPHP49418 695 aa14.74□□□□□ -0.05
CSRP1-216ENST00000532460 R3HDM1Q15032 1099 aaKnown RBP14.74□□□□□ -0.05
CSRP1-216ENST00000532460 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
CSRP1-216ENST00000532460 TNNT2P45379 298 aaPredicted RBP14.73□□□□□ -0.05
CSRP1-216ENST00000532460 PTF1AQ7RTS3 328 aa14.73□□□□□ -0.05
CSRP1-216ENST00000532460 SRCAPQ6ZRS2 3230 aa14.73□□□□□ -0.05
CSRP1-216ENST00000532460 RNF123Q5XPI4 1314 aa14.72□□□□□ -0.05
CSRP1-216ENST00000532460 NBPF14Q5TI25 921 aa14.72□□□□□ -0.05
CSRP1-216ENST00000532460 ZNF521Q96K83 1311 aa14.71□□□□□ -0.05
CSRP1-216ENST00000532460 RRS1Q15050 365 aaKnown RBP14.71□□□□□ -0.05
CSRP1-216ENST00000532460 LTV1Q96GA3 475 aaPredicted RBP14.71□□□□□ -0.05
CSRP1-216ENST00000532460 LTN1O94822 1766 aa14.7□□□□□ -0.06
CSRP1-216ENST00000532460 TNS2Q63HR2 1409 aa14.7□□□□□ -0.06
CSRP1-216ENST00000532460 PROM2Q8N271 834 aa14.69□□□□□ -0.06
CSRP1-216ENST00000532460 RTL1A6NKG5 1358 aa14.69□□□□□ -0.06
CSRP1-216ENST00000532460 KCNQ2O43526 872 aa14.69□□□□□ -0.06
CSRP1-216ENST00000532460 RUNDC1Q96C34 613 aa14.69□□□□□ -0.06
CSRP1-216ENST00000532460 WNK3Q9BYP7 1800 aa14.68□□□□□ -0.06
CSRP1-216ENST00000532460 APAF1O14727 1248 aa14.68□□□□□ -0.06
CSRP1-216ENST00000532460 SALL2Q9Y467 1007 aaPredicted RBP14.68□□□□□ -0.06
CSRP1-216ENST00000532460 KIF24Q5T7B8 1368 aa14.68□□□□□ -0.06
CSRP1-216ENST00000532460 NBPF6Q5VWK0 638 aa14.67□□□□□ -0.06
CSRP1-216ENST00000532460 NBPF4Q96M43 638 aa14.67□□□□□ -0.06
CSRP1-216ENST00000532460 GOLGA2Q08379 1002 aa14.66□□□□□ -0.06
CSRP1-216ENST00000532460 HSP90AB2PQ58FF8 381 aa14.66□□□□□ -0.06
CSRP1-216ENST00000532460 POLKQ9UBT6 870 aa14.66□□□□□ -0.06
CSRP1-216ENST00000532460 COL3A1P02461 1466 aaPredicted RBP14.65□□□□□ -0.06
CSRP1-216ENST00000532460 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
CSRP1-216ENST00000532460 CCDC146Q8IYE0 955 aa14.65□□□□□ -0.06
CSRP1-216ENST00000532460 DDX54Q8TDD1 881 aaKnown RBP14.65□□□□□ -0.06
CSRP1-216ENST00000532460 CDCA7LQ96GN5 454 aa14.65□□□□□ -0.06
CSRP1-216ENST00000532460 ACSBG1Q96GR2 724 aa14.65□□□□□ -0.06
CSRP1-216ENST00000532460 SBF2Q86WG5 1849 aa14.65□□□□□ -0.06
CSRP1-216ENST00000532460 RREB1Q92766 1687 aa14.65□□□□□ -0.06
CSRP1-216ENST00000532460 FLT4P35916 1363 aa14.64□□□□□ -0.07
CSRP1-216ENST00000532460 DIAPH1O60610 1272 aaKnown RBP14.64□□□□□ -0.07
CSRP1-216ENST00000532460 TXNRD1Q16881 649 aa14.64□□□□□ -0.07
CSRP1-216ENST00000532460 CCDC27Q2M243 656 aa14.64□□□□□ -0.07
CSRP1-216ENST00000532460 TRMT2AQ8IZ69 625 aaKnown RBP14.64□□□□□ -0.07
CSRP1-216ENST00000532460 ZCRB1Q8TBF4 217 aaKnown RBP14.63□□□□□ -0.07
CSRP1-216ENST00000532460 PNNQ9H307 717 aaKnown RBP14.63□□□□□ -0.07
CSRP1-216ENST00000532460 RCAN3Q9UKA8 241 aa14.63□□□□□ -0.07
CSRP1-216ENST00000532460 ANKRD26Q9UPS8 1709 aa14.63□□□□□ -0.07
CSRP1-216ENST00000532460 LRP5O75197 1615 aa14.63□□□□□ -0.07
CSRP1-216ENST00000532460 U2AF1L5P0DN76 240 aaPredicted RBP14.63□□□□□ -0.07
CSRP1-216ENST00000532460 U2AF1Q01081 240 aaKnown RBP eCLIP14.63□□□□□ -0.07
CSRP1-216ENST00000532460 SLFN5Q08AF3 891 aa14.63□□□□□ -0.07
CSRP1-216ENST00000532460 DUSP27Q5VZP5 1158 aa14.63□□□□□ -0.07
CSRP1-216ENST00000532460 EMILIN1Q9Y6C2 1016 aa14.63□□□□□ -0.07
CSRP1-216ENST00000532460 RGPD3A6NKT7 1758 aaPredicted RBP14.62□□□□□ -0.07
CSRP1-216ENST00000532460 RGPD4Q7Z3J3 1758 aa14.62□□□□□ -0.07
CSRP1-216ENST00000532460 NUP188Q5SRE5 1749 aa14.62□□□□□ -0.07
CSRP1-216ENST00000532460 E9PSI1 815 aa14.62□□□□□ -0.07
CSRP1-216ENST00000532460 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
CSRP1-216ENST00000532460 FAM208AQ9UK61 1670 aaKnown RBP14.61□□□□□ -0.07
CSRP1-216ENST00000532460 WWC1Q8IX03 1113 aa14.61□□□□□ -0.07
CSRP1-216ENST00000532460 USHBP1Q8N6Y0 703 aa14.61□□□□□ -0.07
CSRP1-216ENST00000532460 RAPGEF4Q8WZA2 1011 aa14.61□□□□□ -0.07
CSRP1-216ENST00000532460 FCHSD2O94868 740 aa14.6□□□□□ -0.07
CSRP1-216ENST00000532460 WDR63Q8IWG1 891 aa14.6□□□□□ -0.07
CSRP1-216ENST00000532460 PLEKHF1Q96S99 279 aa14.6□□□□□ -0.07
CSRP1-216ENST00000532460 MEGF6O75095 1541 aa14.59□□□□□ -0.07
CSRP1-216ENST00000532460 PPM1GO15355 546 aaPredicted RBP14.59□□□□□ -0.07
CSRP1-216ENST00000532460 TATP17735 454 aaPredicted RBP14.59□□□□□ -0.07
CSRP1-216ENST00000532460 SLC15A2Q16348 729 aa14.59□□□□□ -0.07
CSRP1-216ENST00000532460 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
CSRP1-216ENST00000532460 KIF20BQ96Q89 1820 aa14.58□□□□□ -0.07
CSRP1-216ENST00000532460 PRIM1P49642 420 aaKnown RBP14.58□□□□□ -0.08
CSRP1-216ENST00000532460 SPON1Q9HCB6 807 aa14.58□□□□□ -0.08
CSRP1-216ENST00000532460 PPP4R2Q9NY27 417 aa14.58□□□□□ -0.08
CSRP1-216ENST00000532460 NHSQ6T4R5 1651 aa14.57□□□□□ -0.08
CSRP1-216ENST00000532460 U2SURPO15042 1029 aaKnown RBP14.57□□□□□ -0.08
CSRP1-216ENST00000532460 IL13P35225 146 aa14.57□□□□□ -0.08
CSRP1-216ENST00000532460 RRP1P56182 461 aaKnown RBP14.57□□□□□ -0.08
CSRP1-216ENST00000532460 STK32BQ9NY57 414 aa14.57□□□□□ -0.08
CSRP1-216ENST00000532460 SLC27A3Q5K4L6 730 aa14.56□□□□□ -0.08
CSRP1-216ENST00000532460 SYTL4Q96C24 671 aaPredicted RBP14.56□□□□□ -0.08
CSRP1-216ENST00000532460 EYA1Q99502 592 aa14.56□□□□□ -0.08
CSRP1-216ENST00000532460 LRRC4BQ9NT99 713 aa14.56□□□□□ -0.08
CSRP1-216ENST00000532460 IRX6P78412 446 aaPredicted RBP14.55□□□□□ -0.08
CSRP1-216ENST00000532460 NCAPD2Q15021 1401 aa14.55□□□□□ -0.08
CSRP1-216ENST00000532460 PDGFDQ9GZP0 370 aaPredicted RBP14.55□□□□□ -0.08
CSRP1-216ENST00000532460 RGPD2P0DJD1 1756 aa14.54□□□□□ -0.08
CSRP1-216ENST00000532460 PCDH11XQ9BZA7 1347 aa14.54□□□□□ -0.08
CSRP1-216ENST00000532460 PCDH11YQ9BZA8 1340 aa14.54□□□□□ -0.08
CSRP1-216ENST00000532460 MAPK8IP3Q9UPT6 1336 aa14.54□□□□□ -0.08
CSRP1-216ENST00000532460 CYP27B1O15528 508 aa14.54□□□□□ -0.08
CSRP1-216ENST00000532460 TMPOP42166 694 aaKnown RBP14.54□□□□□ -0.08
CSRP1-216ENST00000532460 RSPH6AQ9H0K4 717 aa14.54□□□□□ -0.08
CSRP1-216ENST00000532460 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
CSRP1-216ENST00000532460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.53□□□□□ -0.08
CSRP1-216ENST00000532460 EIF4A2Q14240 407 aaKnown RBP14.52□□□□□ -0.08
CSRP1-216ENST00000532460 NKX1-1Q15270 411 aaPredicted RBP14.52□□□□□ -0.08
CSRP1-216ENST00000532460 IL16Q14005 1332 aa14.51□□□□□ -0.09
CSRP1-216ENST00000532460 NEFMP07197 916 aa14.51□□□□□ -0.09
CSRP1-216ENST00000532460 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
CSRP1-216ENST00000532460 SPG7Q9UQ90 795 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms