RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 LRRFIP2Q9Y608 721 aaKnown RBP12.98□□□□□ -0.33
CHEK1-213ENST00000532449 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.98□□□□□ -0.334e-6■□□□□ 8.8
CHEK1-213ENST00000532449 GNAI2P04899 355 aa12.98□□□□□ -0.33
CHEK1-213ENST00000532449 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
CHEK1-213ENST00000532449 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
CHEK1-213ENST00000532449 IDI1Q13907 227 aa12.98□□□□□ -0.33
CHEK1-213ENST00000532449 PRPF40BQ6NWY9 871 aaKnown RBP12.98□□□□□ -0.33
CHEK1-213ENST00000532449 KIF3AQ9Y496 699 aa12.98□□□□□ -0.33
CHEK1-213ENST00000532449 VAMP4O75379 141 aa12.98□□□□□ -0.33
CHEK1-213ENST00000532449 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
CHEK1-213ENST00000532449 USP48Q86UV5 1035 aa12.98□□□□□ -0.33
CHEK1-213ENST00000532449 PDCL2Q8N4E4 241 aa12.98□□□□□ -0.33
CHEK1-213ENST00000532449 G2E3Q7L622 706 aa12.97□□□□□ -0.33
CHEK1-213ENST00000532449 OFD1O75665 1012 aa12.97□□□□□ -0.33
CHEK1-213ENST00000532449 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
CHEK1-213ENST00000532449 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
CHEK1-213ENST00000532449 KDM5CP41229 1560 aa12.97□□□□□ -0.33
CHEK1-213ENST00000532449 ZBTB7BO15156 539 aaPredicted RBP12.97□□□□□ -0.33
CHEK1-213ENST00000532449 FCHSD2O94868 740 aa12.97□□□□□ -0.33
CHEK1-213ENST00000532449 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
CHEK1-213ENST00000532449 CHMP4CQ96CF2 233 aa12.97□□□□□ -0.33
CHEK1-213ENST00000532449 SLC26A8Q96RN1 970 aa12.97□□□□□ -0.33
CHEK1-213ENST00000532449 ZKSCAN5Q9Y2L8 839 aa12.97□□□□□ -0.33
CHEK1-213ENST00000532449 LRRIQ1Q96JM4 1722 aa12.96□□□□□ -0.33
CHEK1-213ENST00000532449 MX1P20591 662 aa12.96□□□□□ -0.33
CHEK1-213ENST00000532449 SASS6Q6UVJ0 657 aa12.96□□□□□ -0.33
CHEK1-213ENST00000532449 RAB11FIP4Q86YS3 637 aa12.96□□□□□ -0.33
CHEK1-213ENST00000532449 LARP1BQ659C4 914 aaKnown RBP12.96□□□□□ -0.33
CHEK1-213ENST00000532449 DNAJC2Q99543 621 aaKnown RBP12.96□□□□□ -0.33
CHEK1-213ENST00000532449 KIF14Q15058 1648 aa12.96□□□□□ -0.33
CHEK1-213ENST00000532449 ATP2B1P20020 1258 aa12.96□□□□□ -0.34
CHEK1-213ENST00000532449 ISM2Q6H9L7 571 aa12.96□□□□□ -0.34
CHEK1-213ENST00000532449 TNNT3P45378 269 aaPredicted RBP12.95□□□□□ -0.34
CHEK1-213ENST00000532449 HDGFL1Q5TGJ6 251 aa12.95□□□□□ -0.34
CHEK1-213ENST00000532449 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
CHEK1-213ENST00000532449 LRRC2Q9BYS8 371 aa12.95□□□□□ -0.34
CHEK1-213ENST00000532449 TOMM22Q9NS69 142 aa12.95□□□□□ -0.34
CHEK1-213ENST00000532449 NLRP6P59044 892 aa12.95□□□□□ -0.34
CHEK1-213ENST00000532449 TEFQ10587 303 aa12.95□□□□□ -0.34
CHEK1-213ENST00000532449 MRPL50Q8N5N7 158 aaKnown RBP12.95□□□□□ -0.34
CHEK1-213ENST00000532449 HSP90AB2PQ58FF8 381 aa12.95□□□□□ -0.34
CHEK1-213ENST00000532449 GPT2Q8TD30 523 aa12.95□□□□□ -0.34
CHEK1-213ENST00000532449 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
CHEK1-213ENST00000532449 CWC22Q9HCG8 908 aaKnown RBP12.95□□□□□ -0.34
CHEK1-213ENST00000532449 ISY1Q9ULR0 285 aaKnown RBP12.95□□□□□ -0.34
CHEK1-213ENST00000532449 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
CHEK1-213ENST00000532449 LRSAM1Q6UWE0 723 aa12.94□□□□□ -0.34
CHEK1-213ENST00000532449 LMBRD1Q9NUN5 540 aa12.94□□□□□ -0.34
CHEK1-213ENST00000532449 PALD1Q9ULE6 856 aa12.94□□□□□ -0.34
CHEK1-213ENST00000532449 UHRF1BP1Q6BDS2 1440 aa12.94□□□□□ -0.34
CHEK1-213ENST00000532449 DNM1Q05193 864 aaKnown RBP12.94□□□□□ -0.34
CHEK1-213ENST00000532449 ATP6V1DQ9Y5K8 247 aa12.94□□□□□ -0.34
CHEK1-213ENST00000532449 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
CHEK1-213ENST00000532449 WDR33Q9C0J8 1336 aaKnown RBP12.94□□□□□ -0.34
CHEK1-213ENST00000532449 USP26Q9BXU7 913 aa12.93□□□□□ -0.34
CHEK1-213ENST00000532449 CCDC8Q9H0W5 538 aaPredicted RBP12.93□□□□□ -0.34
CHEK1-213ENST00000532449 HSP90AA4PQ58FG1 418 aa12.93□□□□□ -0.34
CHEK1-213ENST00000532449 SNX21Q969T3 373 aa12.93□□□□□ -0.34
CHEK1-213ENST00000532449 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
CHEK1-213ENST00000532449 SDF4Q9BRK5 362 aa12.93□□□□□ -0.34
CHEK1-213ENST00000532449 TNMDQ9H2S6 317 aa12.93□□□□□ -0.34
CHEK1-213ENST00000532449 RBM25P49756 843 aaKnown RBP12.93□□□□□ -0.34
CHEK1-213ENST00000532449 NOLC1Q14978 699 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHEK1-213ENST00000532449 TRAPPC8Q9Y2L5 1435 aa12.93□□□□□ -0.34
CHEK1-213ENST00000532449 PDE1AP54750 535 aa12.92□□□□□ -0.34
CHEK1-213ENST00000532449 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
CHEK1-213ENST00000532449 ERCC4Q92889 916 aaPredicted RBP12.92□□□□□ -0.34
CHEK1-213ENST00000532449 BOLA2Q9H3K6 86 aa12.92□□□□□ -0.34
CHEK1-213ENST00000532449 DNMT1P26358 1616 aaKnown RBP12.92□□□□□ -0.34
CHEK1-213ENST00000532449 A0A087WWV3 80 aa12.92□□□□□ -0.34
CHEK1-213ENST00000532449 SMC2O95347 1197 aa12.92□□□□□ -0.34
CHEK1-213ENST00000532449 U2AF2P26368 475 aaKnown RBP eCLIP12.92□□□□□ -0.341e-9■■□□□ 14.5
CHEK1-213ENST00000532449 NRDCO43847 1150 aa12.91□□□□□ -0.34
CHEK1-213ENST00000532449 MAP7D2Q96T17 732 aa12.91□□□□□ -0.34
CHEK1-213ENST00000532449 BIN1O00499 593 aa12.91□□□□□ -0.34
CHEK1-213ENST00000532449 PES1O00541 588 aaKnown RBP12.91□□□□□ -0.34
CHEK1-213ENST00000532449 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
CHEK1-213ENST00000532449 PIP4K2AP48426 406 aaPredicted RBP12.91□□□□□ -0.34
CHEK1-213ENST00000532449 SIRT2Q8IXJ6 389 aa12.91□□□□□ -0.34
CHEK1-213ENST00000532449 CLASRPQ8N2M8 674 aaKnown RBP12.91□□□□□ -0.34
CHEK1-213ENST00000532449 GPATCH3Q96I76 525 aa12.91□□□□□ -0.34
CHEK1-213ENST00000532449 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
CHEK1-213ENST00000532449 MYL6BP14649 208 aa12.9□□□□□ -0.34
CHEK1-213ENST00000532449 PTGS1P23219 599 aa12.9□□□□□ -0.34
CHEK1-213ENST00000532449 ALDH1L2Q3SY69 923 aa12.9□□□□□ -0.34
CHEK1-213ENST00000532449 RPAP2Q8IXW5 612 aaPredicted RBP12.9□□□□□ -0.34
CHEK1-213ENST00000532449 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
CHEK1-213ENST00000532449 PIK3C2GO75747 1445 aa12.9□□□□□ -0.34
CHEK1-213ENST00000532449 CCDC186Q7Z3E2 898 aa12.9□□□□□ -0.34
CHEK1-213ENST00000532449 AACSQ86V21 672 aa12.9□□□□□ -0.34
CHEK1-213ENST00000532449 LUZP1Q86V48 1076 aa12.9□□□□□ -0.34
CHEK1-213ENST00000532449 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.34
CHEK1-213ENST00000532449 POLR3AO14802 1390 aaPredicted RBP12.9□□□□□ -0.34
CHEK1-213ENST00000532449 ABCA8O94911 1581 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 GJB2P29033 226 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 CEP85Q6P2H3 762 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 CCDC112Q8NEF3 446 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 INSRP06213 1382 aa12.89□□□□□ -0.35
CHEK1-213ENST00000532449 CNTROBQ8N137 903 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms