RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 DOT1LQ8TEK3 1739 aa18.83■□□□□ 0.6
CLNS1A-211ENST00000532069 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
CLNS1A-211ENST00000532069 MSL1Q68DK7 614 aa18.82■□□□□ 0.6
CLNS1A-211ENST00000532069 DDX54Q8TDD1 881 aaKnown RBP18.82■□□□□ 0.6
CLNS1A-211ENST00000532069 KLRG1Q96E93 195 aa18.82■□□□□ 0.6
CLNS1A-211ENST00000532069 EVC2Q86UK5 1308 aa18.81■□□□□ 0.6
CLNS1A-211ENST00000532069 IGSF1Q8N6C5 1336 aa18.81■□□□□ 0.6
CLNS1A-211ENST00000532069 JMYQ8N9B5 988 aa18.81■□□□□ 0.6
CLNS1A-211ENST00000532069 USP47Q96K76 1375 aa18.81■□□□□ 0.6
CLNS1A-211ENST00000532069 CICQ96RK0 1608 aaPredicted RBP18.79■□□□□ 0.6
CLNS1A-211ENST00000532069 PRIM1P49642 420 aaKnown RBP18.79■□□□□ 0.6
CLNS1A-211ENST00000532069 KCNQ4P56696 695 aa18.79■□□□□ 0.6
CLNS1A-211ENST00000532069 C16orf71Q8IYS4 520 aaPredicted RBP18.79■□□□□ 0.6
CLNS1A-211ENST00000532069 ANKRD24Q8TF21 1146 aa18.79■□□□□ 0.6
CLNS1A-211ENST00000532069 C5P01031 1676 aa18.79■□□□□ 0.6
CLNS1A-211ENST00000532069 RBM46Q8TBY0 533 aaKnown RBP18.78■□□□□ 0.6
CLNS1A-211ENST00000532069 USP54Q70EL1 1684 aa18.78■□□□□ 0.6
CLNS1A-211ENST00000532069 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
CLNS1A-211ENST00000532069 NSD3Q9BZ95 1437 aa18.76■□□□□ 0.59
CLNS1A-211ENST00000532069 FSTL1Q12841 308 aa18.75■□□□□ 0.59
CLNS1A-211ENST00000532069 USP31Q70CQ4 1352 aa18.74■□□□□ 0.59
CLNS1A-211ENST00000532069 MON2Q7Z3U7 1717 aa18.74■□□□□ 0.59
CLNS1A-211ENST00000532069 NSD2O96028 1365 aa18.73■□□□□ 0.59
CLNS1A-211ENST00000532069 RAB3GAP2Q9H2M9 1393 aa18.73■□□□□ 0.59
CLNS1A-211ENST00000532069 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
CLNS1A-211ENST00000532069 TAF1LQ8IZX4 1826 aa18.72■□□□□ 0.59
CLNS1A-211ENST00000532069 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
CLNS1A-211ENST00000532069 AK7Q96M32 723 aa18.7■□□□□ 0.58
CLNS1A-211ENST00000532069 WWC3Q9ULE0 1092 aa18.7■□□□□ 0.58
CLNS1A-211ENST00000532069 PLEKHG2Q9H7P9 1386 aa18.69■□□□□ 0.58
CLNS1A-211ENST00000532069 SLC34A2O95436 690 aa18.68■□□□□ 0.58
CLNS1A-211ENST00000532069 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLNS1A-211ENST00000532069 NMRK2Q9NPI5 230 aa18.67■□□□□ 0.58
CLNS1A-211ENST00000532069 C4BP0C0L5 1744 aa18.66■□□□□ 0.58
CLNS1A-211ENST00000532069 KDM2BQ8NHM5 1336 aa18.66■□□□□ 0.58
CLNS1A-211ENST00000532069 IP6K1Q92551 441 aa18.65■□□□□ 0.58
CLNS1A-211ENST00000532069 CGNL1Q0VF96 1302 aa18.65■□□□□ 0.58
CLNS1A-211ENST00000532069 UBR3Q6ZT12 1888 aa18.65■□□□□ 0.58
CLNS1A-211ENST00000532069 TGFB2P61812 414 aa18.64■□□□□ 0.57
CLNS1A-211ENST00000532069 PALLDQ8WX93 1383 aa18.64■□□□□ 0.57
CLNS1A-211ENST00000532069 SSFA2P28290 1259 aa18.63■□□□□ 0.57
CLNS1A-211ENST00000532069 HTRA3P83110 453 aa18.63■□□□□ 0.57
CLNS1A-211ENST00000532069 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
CLNS1A-211ENST00000532069 BCS1LQ9Y276 419 aa18.63■□□□□ 0.57
CLNS1A-211ENST00000532069 C10orf71Q711Q0 1435 aa18.63■□□□□ 0.57
CLNS1A-211ENST00000532069 KIF13BQ9NQT8 1826 aa18.63■□□□□ 0.57
CLNS1A-211ENST00000532069 ARHGAP27Q6ZUM4 889 aa18.62■□□□□ 0.57
CLNS1A-211ENST00000532069 LTV1Q96GA3 475 aaPredicted RBP18.62■□□□□ 0.57
CLNS1A-211ENST00000532069 TNRC6CQ9HCJ0 1690 aaKnown RBP18.62■□□□□ 0.57
CLNS1A-211ENST00000532069 PHF14O94880 888 aa18.61■□□□□ 0.57
CLNS1A-211ENST00000532069 HSPA1AP0DMV8 641 aaKnown RBP18.61■□□□□ 0.57
CLNS1A-211ENST00000532069 HSPA1BP0DMV9 641 aaKnown RBP18.61■□□□□ 0.57
CLNS1A-211ENST00000532069 HDGFL2Q7Z4V5 671 aaPredicted RBP18.61■□□□□ 0.57
CLNS1A-211ENST00000532069 NME9Q86XW9 330 aa18.61■□□□□ 0.57
CLNS1A-211ENST00000532069 SMC1BQ8NDV3 1235 aa18.61■□□□□ 0.57
CLNS1A-211ENST00000532069 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.6■□□□□ 0.57
CLNS1A-211ENST00000532069 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
CLNS1A-211ENST00000532069 PCDH10Q9P2E7 1040 aa18.6■□□□□ 0.57
CLNS1A-211ENST00000532069 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
CLNS1A-211ENST00000532069 PXDNLA1KZ92 1463 aa18.59■□□□□ 0.57
CLNS1A-211ENST00000532069 PCNTO95613 3336 aa18.59■□□□□ 0.57
CLNS1A-211ENST00000532069 N4BP2Q86UW6 1770 aaPredicted RBP18.59■□□□□ 0.57
CLNS1A-211ENST00000532069 TOGARAM1Q9Y4F4 1720 aa18.59■□□□□ 0.57
CLNS1A-211ENST00000532069 EDC4Q6P2E9 1401 aaKnown RBP18.58■□□□□ 0.57
CLNS1A-211ENST00000532069 SBNO2Q9Y2G9 1366 aa18.57■□□□□ 0.56
CLNS1A-211ENST00000532069 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
CLNS1A-211ENST00000532069 MEGF6O75095 1541 aa18.57■□□□□ 0.56
CLNS1A-211ENST00000532069 ARFGEF1Q9Y6D6 1849 aa18.56■□□□□ 0.56
CLNS1A-211ENST00000532069 PCDH11XQ9BZA7 1347 aa18.56■□□□□ 0.56
CLNS1A-211ENST00000532069 PCDH11YQ9BZA8 1340 aa18.56■□□□□ 0.56
CLNS1A-211ENST00000532069 FCHSD2O94868 740 aa18.56■□□□□ 0.56
CLNS1A-211ENST00000532069 C9orf131Q5VYM1 1079 aa18.56■□□□□ 0.56
CLNS1A-211ENST00000532069 RGPD2P0DJD1 1756 aa18.55■□□□□ 0.56
CLNS1A-211ENST00000532069 KIAA1551Q9HCM1 1747 aa18.55■□□□□ 0.56
CLNS1A-211ENST00000532069 AMPHP49418 695 aa18.55■□□□□ 0.56
CLNS1A-211ENST00000532069 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
CLNS1A-211ENST00000532069 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
CLNS1A-211ENST00000532069 CCDC87Q9NVE4 849 aa18.54■□□□□ 0.56
CLNS1A-211ENST00000532069 TERF2IPQ9NYB0 399 aa18.54■□□□□ 0.56
CLNS1A-211ENST00000532069 SMG6Q86US8 1419 aaKnown RBP18.54■□□□□ 0.56
CLNS1A-211ENST00000532069 MMP10P09238 476 aa18.53■□□□□ 0.56
CLNS1A-211ENST00000532069 TATP17735 454 aaPredicted RBP18.53■□□□□ 0.56
CLNS1A-211ENST00000532069 BRCA1P38398 1863 aaKnown RBP18.53■□□□□ 0.56
CLNS1A-211ENST00000532069 ITGB4P16144 1822 aa18.53■□□□□ 0.56
CLNS1A-211ENST00000532069 HOXC9P31274 260 aa18.52■□□□□ 0.56
CLNS1A-211ENST00000532069 RRAGCQ9HB90 399 aa18.52■□□□□ 0.56
CLNS1A-211ENST00000532069 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
CLNS1A-211ENST00000532069 NLGN1Q8N2Q7 840 aa18.51■□□□□ 0.55
CLNS1A-211ENST00000532069 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
CLNS1A-211ENST00000532069 RTL1A6NKG5 1358 aa18.51■□□□□ 0.55
CLNS1A-211ENST00000532069 ZC3H4Q9UPT8 1303 aaKnown RBP18.5■□□□□ 0.55
CLNS1A-211ENST00000532069 RNF181Q9P0P0 153 aa18.5■□□□□ 0.55
CLNS1A-211ENST00000532069 ROCK2O75116 1388 aaKnown RBP18.5■□□□□ 0.55
CLNS1A-211ENST00000532069 CD163L1Q9NR16 1453 aa18.5■□□□□ 0.55
CLNS1A-211ENST00000532069 GNPATO15228 680 aa18.49■□□□□ 0.55
CLNS1A-211ENST00000532069 COG3Q96JB2 828 aa18.49■□□□□ 0.55
CLNS1A-211ENST00000532069 AMIGO3Q86WK7 504 aa18.48■□□□□ 0.55
CLNS1A-211ENST00000532069 MAP3K19Q56UN5 1328 aa18.48■□□□□ 0.55
CLNS1A-211ENST00000532069 LOC102724428A0A0B4J2F2 783 aa18.47■□□□□ 0.55
CLNS1A-211ENST00000532069 SIK1P57059 783 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms