RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.21
NXF1-211ENST00000531709 XPCQ01831 940 aaPredicted RBP13.77□□□□□ -0.21
NXF1-211ENST00000531709 NUTM1Q86Y26 1132 aa13.77□□□□□ -0.21
NXF1-211ENST00000531709 ZMYM3Q14202 1370 aa13.77□□□□□ -0.21
NXF1-211ENST00000531709 GNAI3P08754 354 aa13.77□□□□□ -0.21
NXF1-211ENST00000531709 CCT4P50991 539 aaKnown RBP13.77□□□□□ -0.21
NXF1-211ENST00000531709 EIF4A2Q14240 407 aaKnown RBP13.76□□□□□ -0.21
NXF1-211ENST00000531709 FGD1P98174 961 aa13.76□□□□□ -0.21
NXF1-211ENST00000531709 NAP1L2Q9ULW6 460 aaPredicted RBP13.76□□□□□ -0.21
NXF1-211ENST00000531709 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
NXF1-211ENST00000531709 CCDC30Q5VVM6 783 aa13.75□□□□□ -0.21
NXF1-211ENST00000531709 MX1P20591 662 aa13.75□□□□□ -0.21
NXF1-211ENST00000531709 PHF14O94880 888 aa13.75□□□□□ -0.21
NXF1-211ENST00000531709 DIAPH3Q9NSV4 1193 aa13.75□□□□□ -0.21
NXF1-211ENST00000531709 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
NXF1-211ENST00000531709 G2E3Q7L622 706 aa13.75□□□□□ -0.21
NXF1-211ENST00000531709 DRC7Q8IY82 874 aa13.75□□□□□ -0.21
NXF1-211ENST00000531709 VPS37CA5D8V6 355 aaPredicted RBP13.74□□□□□ -0.21
NXF1-211ENST00000531709 FIBPO43427 364 aa13.74□□□□□ -0.21
NXF1-211ENST00000531709 MBD3O95983 291 aa13.74□□□□□ -0.21
NXF1-211ENST00000531709 PDE1AP54750 535 aa13.74□□□□□ -0.21
NXF1-211ENST00000531709 EID1Q9Y6B2 187 aa13.74□□□□□ -0.21
NXF1-211ENST00000531709 TMX3Q96JJ7 454 aa13.74□□□□□ -0.21
NXF1-211ENST00000531709 UHRF1BP1LA0JNW5 1464 aa13.74□□□□□ -0.21
NXF1-211ENST00000531709 EFCAB6Q5THR3 1501 aa13.74□□□□□ -0.21
NXF1-211ENST00000531709 UBE2Q2Q8WVN8 375 aa13.74□□□□□ -0.21
NXF1-211ENST00000531709 HDGFL1Q5TGJ6 251 aa13.73□□□□□ -0.21
NXF1-211ENST00000531709 DDX54Q8TDD1 881 aaKnown RBP13.73□□□□□ -0.21
NXF1-211ENST00000531709 SMC3Q9UQE7 1217 aa13.73□□□□□ -0.21
NXF1-211ENST00000531709 LRRFIP2Q9Y608 721 aaKnown RBP13.73□□□□□ -0.21
NXF1-211ENST00000531709 C9orf78Q9NZ63 289 aaPredicted RBP13.73□□□□□ -0.21
NXF1-211ENST00000531709 CCDC9Q9Y3X0 531 aaKnown RBP13.73□□□□□ -0.21
NXF1-211ENST00000531709 ABCC4O15439 1325 aa13.73□□□□□ -0.21
NXF1-211ENST00000531709 TSPY26PQ9H489 355 aa13.72□□□□□ -0.21
NXF1-211ENST00000531709 MCM2P49736 904 aa13.72□□□□□ -0.21
NXF1-211ENST00000531709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.72□□□□□ -0.21
NXF1-211ENST00000531709 DTNBO60941 627 aa13.72□□□□□ -0.21
NXF1-211ENST00000531709 TPM2P07951 284 aa13.72□□□□□ -0.21
NXF1-211ENST00000531709 TEFQ10587 303 aa13.72□□□□□ -0.21
NXF1-211ENST00000531709 CWC27Q6UX04 472 aaKnown RBP13.72□□□□□ -0.21
NXF1-211ENST00000531709 ACEP12821 1306 aa13.72□□□□□ -0.21
NXF1-211ENST00000531709 MSH6P52701 1360 aa13.72□□□□□ -0.21
NXF1-211ENST00000531709 CEP152O94986 1710 aa13.72□□□□□ -0.21
NXF1-211ENST00000531709 SRGAP3O43295 1099 aa13.71□□□□□ -0.21
NXF1-211ENST00000531709 RRP9O43818 475 aaKnown RBP13.71□□□□□ -0.21
NXF1-211ENST00000531709 KIF2CQ99661 725 aa13.71□□□□□ -0.21
NXF1-211ENST00000531709 PTPRCP08575 1304 aa13.71□□□□□ -0.21
NXF1-211ENST00000531709 FLIIQ13045 1269 aa13.71□□□□□ -0.21
NXF1-211ENST00000531709 RBSNQ9H1K0 784 aa13.71□□□□□ -0.21
NXF1-211ENST00000531709 ZFYVE9O95405 1425 aa13.71□□□□□ -0.22
NXF1-211ENST00000531709 USHBP1Q8N6Y0 703 aa13.71□□□□□ -0.22
NXF1-211ENST00000531709 CCDC39Q9UFE4 941 aa13.71□□□□□ -0.22
NXF1-211ENST00000531709 IQSEC2Q5JU85 1478 aa13.7□□□□□ -0.22
NXF1-211ENST00000531709 NLRP1Q9C000 1473 aa13.7□□□□□ -0.22
NXF1-211ENST00000531709 ERBB4Q15303 1308 aa13.7□□□□□ -0.22
NXF1-211ENST00000531709 ABTB2Q8N961 1025 aa13.7□□□□□ -0.22
NXF1-211ENST00000531709 POGZQ7Z3K3 1410 aa13.7□□□□□ -0.22
NXF1-211ENST00000531709 RIMS2Q9UQ26 1411 aa13.7□□□□□ -0.22
NXF1-211ENST00000531709 IFIT2P09913 472 aaKnown RBP13.69□□□□□ -0.22
NXF1-211ENST00000531709 MTHFSDQ2M296 383 aaKnown RBP13.69□□□□□ -0.22
NXF1-211ENST00000531709 AIMP1Q12904 312 aaKnown RBP13.69□□□□□ -0.22
NXF1-211ENST00000531709 LMBRD1Q9NUN5 540 aa13.69□□□□□ -0.22
NXF1-211ENST00000531709 CHAF1AQ13111 956 aaPredicted RBP13.68□□□□□ -0.22
NXF1-211ENST00000531709 GPATCH3Q96I76 525 aa13.68□□□□□ -0.22
NXF1-211ENST00000531709 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
NXF1-211ENST00000531709 UQCRHLA0A096LP55 91 aa13.68□□□□□ -0.22
NXF1-211ENST00000531709 UQCRHP07919 91 aa13.68□□□□□ -0.22
NXF1-211ENST00000531709 ATP6V1DQ9Y5K8 247 aa13.68□□□□□ -0.22
NXF1-211ENST00000531709 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
NXF1-211ENST00000531709 ESYT1Q9BSJ8 1104 aa13.68□□□□□ -0.22
NXF1-211ENST00000531709 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
NXF1-211ENST00000531709 SPG7Q9UQ90 795 aa13.68□□□□□ -0.22
NXF1-211ENST00000531709 MYOM1P52179 1685 aa13.67□□□□□ -0.22
NXF1-211ENST00000531709 QRICH2Q9H0J4 1663 aa13.67□□□□□ -0.22
NXF1-211ENST00000531709 CHL1O00533 1208 aa13.67□□□□□ -0.22
NXF1-211ENST00000531709 ANXA1P04083 346 aa13.67□□□□□ -0.22
NXF1-211ENST00000531709 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
NXF1-211ENST00000531709 WDR33Q9C0J8 1336 aaKnown RBP13.67□□□□□ -0.22
NXF1-211ENST00000531709 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
NXF1-211ENST00000531709 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
NXF1-211ENST00000531709 TULP4Q9NRJ4 1543 aa13.67□□□□□ -0.22
NXF1-211ENST00000531709 GNAT3A8MTJ3 354 aa13.66□□□□□ -0.22
NXF1-211ENST00000531709 ZNF853P0CG23 659 aa13.66□□□□□ -0.22
NXF1-211ENST00000531709 CLASRPQ8N2M8 674 aaKnown RBP13.66□□□□□ -0.22
NXF1-211ENST00000531709 LRSAM1Q6UWE0 723 aa13.66□□□□□ -0.22
NXF1-211ENST00000531709 RUFY2Q8WXA3 655 aa13.66□□□□□ -0.22
NXF1-211ENST00000531709 YEATS2Q9ULM3 1422 aa13.66□□□□□ -0.22
NXF1-211ENST00000531709 HSP90B1P14625 803 aaKnown RBP13.66□□□□□ -0.22
NXF1-211ENST00000531709 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
NXF1-211ENST00000531709 SPC24Q8NBT2 197 aa13.66□□□□□ -0.22
NXF1-211ENST00000531709 ZNF830Q96NB3 372 aaPredicted RBP13.66□□□□□ -0.22
NXF1-211ENST00000531709 PNMA6EA0A0J9YXQ4 647 aa13.65□□□□□ -0.22
NXF1-211ENST00000531709 USP25Q9UHP3 1055 aa13.65□□□□□ -0.22
NXF1-211ENST00000531709 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
NXF1-211ENST00000531709 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.65□□□□□ -0.22
NXF1-211ENST00000531709 PPRC1Q5VV67 1664 aaKnown RBP13.65□□□□□ -0.22
NXF1-211ENST00000531709 ADGRB3O60242 1522 aa13.65□□□□□ -0.22
NXF1-211ENST00000531709 GLI2P10070 1586 aa13.65□□□□□ -0.22
NXF1-211ENST00000531709 CASTP20810 708 aaKnown RBP13.65□□□□□ -0.22
NXF1-211ENST00000531709 PPP1R42Q7Z4L9 355 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms