RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 APAF1O14727 1248 aa23.33■■□□□ 1.33
CTSB-222ENST00000531551 NEUROD2Q15784 382 aa23.33■■□□□ 1.33
CTSB-222ENST00000531551 PLEKHO1Q53GL0 409 aaPredicted RBP23.32■■□□□ 1.32
CTSB-222ENST00000531551 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
CTSB-222ENST00000531551 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
CTSB-222ENST00000531551 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
CTSB-222ENST00000531551 BARGINQ6ZT62 677 aa23.32■■□□□ 1.32
CTSB-222ENST00000531551 RGS17Q9UGC6 210 aaPredicted RBP23.32■■□□□ 1.32
CTSB-222ENST00000531551 MTHFSDQ2M296 383 aaKnown RBP23.31■■□□□ 1.32
CTSB-222ENST00000531551 AMOTQ4VCS5 1084 aa23.3■■□□□ 1.32
CTSB-222ENST00000531551 CDCA7Q9BWT1 371 aaPredicted RBP23.3■■□□□ 1.32
CTSB-222ENST00000531551 SPG7Q9UQ90 795 aa23.3■■□□□ 1.32
CTSB-222ENST00000531551 ZCRB1Q8TBF4 217 aaKnown RBP23.29■■□□□ 1.32
CTSB-222ENST00000531551 HNRNPUQ00839 825 aaKnown RBP eCLIP23.28■■□□□ 1.32
CTSB-222ENST00000531551 GAS2L2Q8NHY3 880 aa23.28■■□□□ 1.32
CTSB-222ENST00000531551 OVOS2A0A0G2JMS6 1433 aa23.28■■□□□ 1.32
CTSB-222ENST00000531551 EXOC5O00471 708 aa23.28■■□□□ 1.32
CTSB-222ENST00000531551 ZNF530Q6P9A1 599 aaPredicted RBP23.28■■□□□ 1.32
CTSB-222ENST00000531551 DISP2A7MBM2 1401 aa23.27■■□□□ 1.32
CTSB-222ENST00000531551 TMPOP42166 694 aaKnown RBP23.27■■□□□ 1.32
CTSB-222ENST00000531551 RBM6P78332 1123 aaKnown RBP23.27■■□□□ 1.32
CTSB-222ENST00000531551 NFE2L2Q16236 605 aa23.27■■□□□ 1.32
CTSB-222ENST00000531551 DDB1Q16531 1140 aa23.27■■□□□ 1.32
CTSB-222ENST00000531551 GLI3P10071 1580 aa23.26■■□□□ 1.31
CTSB-222ENST00000531551 RIPK4P57078 832 aa23.26■■□□□ 1.31
CTSB-222ENST00000531551 POTEAQ6S8J7 498 aa23.26■■□□□ 1.31
CTSB-222ENST00000531551 DDX54Q8TDD1 881 aaKnown RBP23.26■■□□□ 1.31
CTSB-222ENST00000531551 RXRBP28702 533 aa23.26■■□□□ 1.31
CTSB-222ENST00000531551 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
CTSB-222ENST00000531551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.25■■□□□ 1.31
CTSB-222ENST00000531551 SEPT12Q8IYM1 358 aa23.23■■□□□ 1.31
CTSB-222ENST00000531551 PARP4Q9UKK3 1724 aaKnown RBP23.23■■□□□ 1.31
CTSB-222ENST00000531551 PCDH11XQ9BZA7 1347 aa23.22■■□□□ 1.31
CTSB-222ENST00000531551 PCDH11YQ9BZA8 1340 aa23.22■■□□□ 1.31
CTSB-222ENST00000531551 IFNL2Q8IZJ0 200 aa23.22■■□□□ 1.31
CTSB-222ENST00000531551 CYP27B1O15528 508 aa23.21■■□□□ 1.31
CTSB-222ENST00000531551 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
CTSB-222ENST00000531551 PLEKHG2Q9H7P9 1386 aa23.2■■□□□ 1.31
CTSB-222ENST00000531551 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
CTSB-222ENST00000531551 ONECUT3O60422 494 aaPredicted RBP23.2■■□□□ 1.3
CTSB-222ENST00000531551 PHKG2P15735 406 aa23.2■■□□□ 1.3
CTSB-222ENST00000531551 PDE3BQ13370 1112 aa23.2■■□□□ 1.3
CTSB-222ENST00000531551 RTF1Q92541 710 aaKnown RBP23.2■■□□□ 1.3
CTSB-222ENST00000531551 TNS2Q63HR2 1409 aa23.19■■□□□ 1.3
CTSB-222ENST00000531551 DCTN1Q14203 1278 aa23.18■■□□□ 1.3
CTSB-222ENST00000531551 MPRIPQ6WCQ1 1025 aa23.18■■□□□ 1.3
CTSB-222ENST00000531551 MAP3K5Q99683 1374 aa23.18■■□□□ 1.3
CTSB-222ENST00000531551 WNK3Q9BYP7 1800 aa23.17■■□□□ 1.3
CTSB-222ENST00000531551 LMOD3Q0VAK6 560 aa23.17■■□□□ 1.3
CTSB-222ENST00000531551 MCM10Q7L590 875 aa23.17■■□□□ 1.3
CTSB-222ENST00000531551 TRIM35Q9UPQ4 493 aa23.17■■□□□ 1.3
CTSB-222ENST00000531551 THUMPD2Q9BTF0 503 aaKnown RBP23.15■■□□□ 1.3
CTSB-222ENST00000531551 LRRC37A3O60309 1634 aa23.15■■□□□ 1.3
CTSB-222ENST00000531551 PKD1L3Q7Z443 1732 aa23.15■■□□□ 1.3
CTSB-222ENST00000531551 MARCH10Q8NA82 808 aaPredicted RBP23.15■■□□□ 1.3
CTSB-222ENST00000531551 THSD7AQ9UPZ6 1657 aa23.14■■□□□ 1.3
CTSB-222ENST00000531551 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
CTSB-222ENST00000531551 WWC1Q8IX03 1113 aa23.14■■□□□ 1.29
CTSB-222ENST00000531551 LGR6Q9HBX8 967 aa23.14■■□□□ 1.29
CTSB-222ENST00000531551 HTATSF1O43719 755 aaKnown RBP23.13■■□□□ 1.29
CTSB-222ENST00000531551 FAM182BQ5T319 152 aa23.13■■□□□ 1.29
CTSB-222ENST00000531551 NGEFQ8N5V2 710 aa23.13■■□□□ 1.29
CTSB-222ENST00000531551 CCDC27Q2M243 656 aa23.12■■□□□ 1.29
CTSB-222ENST00000531551 IL17REQ8NFR9 667 aa23.12■■□□□ 1.29
CTSB-222ENST00000531551 DCAF5Q96JK2 942 aa23.12■■□□□ 1.29
CTSB-222ENST00000531551 RNMTO43148 476 aaKnown RBP23.11■■□□□ 1.29
CTSB-222ENST00000531551 KRT27Q7Z3Y8 459 aa23.11■■□□□ 1.29
CTSB-222ENST00000531551 NCBP3Q53F19 620 aaKnown RBP23.1■■□□□ 1.29
CTSB-222ENST00000531551 RGS12O14924 1447 aa23.1■■□□□ 1.29
CTSB-222ENST00000531551 NKX1-1Q15270 411 aaPredicted RBP23.09■■□□□ 1.29
CTSB-222ENST00000531551 SHANK3Q9BYB0 1731 aa23.09■■□□□ 1.29
CTSB-222ENST00000531551 LAS1LQ9Y4W2 734 aaKnown RBP23.09■■□□□ 1.29
CTSB-222ENST00000531551 ZBED9Q6R2W3 1325 aa23.09■■□□□ 1.29
CTSB-222ENST00000531551 TEFQ10587 303 aa23.08■■□□□ 1.29
CTSB-222ENST00000531551 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.28
CTSB-222ENST00000531551 SYTL4Q96C24 671 aaPredicted RBP23.07■■□□□ 1.28
CTSB-222ENST00000531551 ACSBG1Q96GR2 724 aa23.07■■□□□ 1.28
CTSB-222ENST00000531551 DLG5Q8TDM6 1919 aa23.07■■□□□ 1.28
CTSB-222ENST00000531551 CABP4P57796 275 aa23.06■■□□□ 1.28
CTSB-222ENST00000531551 CALD1Q05682 793 aaKnown RBP23.05■■□□□ 1.28
CTSB-222ENST00000531551 WDR63Q8IWG1 891 aa23.05■■□□□ 1.28
CTSB-222ENST00000531551 ZNF521Q96K83 1311 aa23.05■■□□□ 1.28
CTSB-222ENST00000531551 CEMIPQ8WUJ3 1361 aa23.04■■□□□ 1.28
CTSB-222ENST00000531551 GOLGA2Q08379 1002 aa23.04■■□□□ 1.28
CTSB-222ENST00000531551 NFATC2IPQ8NCF5 419 aa23.04■■□□□ 1.28
CTSB-222ENST00000531551 SLC52A2Q9HAB3 445 aa23.03■■□□□ 1.28
CTSB-222ENST00000531551 ERVV-2B6SEH9 535 aa23.02■■□□□ 1.28
CTSB-222ENST00000531551 PRIM1P49642 420 aaKnown RBP23.02■■□□□ 1.28
CTSB-222ENST00000531551 CDCA7LQ96GN5 454 aa23.02■■□□□ 1.28
CTSB-222ENST00000531551 MIS18AQ9NYP9 233 aa23.02■■□□□ 1.28
CTSB-222ENST00000531551 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
CTSB-222ENST00000531551 TMOD3Q9NYL9 352 aa23.01■■□□□ 1.27
CTSB-222ENST00000531551 SPINK5Q9NQ38 1064 aaPredicted RBP23■■□□□ 1.27
CTSB-222ENST00000531551 FAM196AQ6ZSG2 479 aa23■■□□□ 1.27
CTSB-222ENST00000531551 BTBD11A6QL63 1104 aa22.99■■□□□ 1.27
CTSB-222ENST00000531551 KCNQ2O43526 872 aa22.99■■□□□ 1.27
CTSB-222ENST00000531551 GNAI1P63096 354 aa22.99■■□□□ 1.27
CTSB-222ENST00000531551 TSPYL4Q9UJ04 414 aa22.99■■□□□ 1.27
CTSB-222ENST00000531551 BRWD3Q6RI45 1802 aa22.99■■□□□ 1.27
CTSB-222ENST00000531551 CFAP44Q96MT7 982 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms