RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 TESK2Q96S53 571 aa29.79■■■□□ 2.36
CHKA-206ENST00000531341 COG3Q96JB2 828 aa29.78■■■□□ 2.36
CHKA-206ENST00000531341 COL24A1Q17RW2 1714 aa29.77■■■□□ 2.36
CHKA-206ENST00000531341 QSER1Q2KHR3 1735 aa29.77■■■□□ 2.36
CHKA-206ENST00000531341 FAM208AQ9UK61 1670 aaKnown RBP29.77■■■□□ 2.36
CHKA-206ENST00000531341 SENP3-EIF4A1A0A087X0R7 540 aa29.77■■■□□ 2.36
CHKA-206ENST00000531341 PELP1Q8IZL8 1130 aaKnown RBP29.77■■■□□ 2.36
CHKA-206ENST00000531341 ZCRB1Q8TBF4 217 aaKnown RBP29.77■■■□□ 2.36
CHKA-206ENST00000531341 TUBGCP6Q96RT7 1819 aa29.77■■■□□ 2.36
CHKA-206ENST00000531341 MEGF6O75095 1541 aa29.76■■■□□ 2.36
CHKA-206ENST00000531341 AMPHP49418 695 aa29.76■■■□□ 2.35
CHKA-206ENST00000531341 DOT1LQ8TEK3 1739 aa29.76■■■□□ 2.35
CHKA-206ENST00000531341 ST20-MTHFSA0A0A6YYL1 179 aa29.75■■■□□ 2.35
CHKA-206ENST00000531341 RGPD2P0DJD1 1756 aa29.75■■■□□ 2.35
CHKA-206ENST00000531341 SHANK3Q9BYB0 1731 aa29.74■■■□□ 2.35
CHKA-206ENST00000531341 NBPF6Q5VWK0 638 aa29.73■■■□□ 2.35
CHKA-206ENST00000531341 USHBP1Q8N6Y0 703 aa29.73■■■□□ 2.35
CHKA-206ENST00000531341 NBPF4Q96M43 638 aa29.73■■■□□ 2.35
CHKA-206ENST00000531341 LY75O60449 1722 aa29.72■■■□□ 2.35
CHKA-206ENST00000531341 RRS1Q15050 365 aaKnown RBP29.72■■■□□ 2.35
CHKA-206ENST00000531341 CCNL1Q9UK58 526 aaPredicted RBP29.72■■■□□ 2.35
CHKA-206ENST00000531341 COL23A1Q86Y22 540 aaPredicted RBP29.71■■■□□ 2.35
CHKA-206ENST00000531341 TONSLQ96HA7 1378 aa29.71■■■□□ 2.35
CHKA-206ENST00000531341 CEP350Q5VT06 3117 aa29.7■■■□□ 2.35
CHKA-206ENST00000531341 YBX3P16989 372 aaKnown RBP eCLIP29.68■■■□□ 2.34
CHKA-206ENST00000531341 MSH5O43196 834 aa29.67■■■□□ 2.34
CHKA-206ENST00000531341 GGNBP2Q9H3C7 697 aa29.67■■■□□ 2.34
CHKA-206ENST00000531341 FYB1O15117 783 aa29.66■■■□□ 2.34
CHKA-206ENST00000531341 MSL1Q68DK7 614 aa29.65■■■□□ 2.34
CHKA-206ENST00000531341 USP47Q96K76 1375 aa29.64■■■□□ 2.34
CHKA-206ENST00000531341 GIGYF1O75420 1035 aaPredicted RBP29.62■■■□□ 2.33
CHKA-206ENST00000531341 RTL1A6NKG5 1358 aa29.62■■■□□ 2.33
CHKA-206ENST00000531341 HSP90AB2PQ58FF8 381 aa29.6■■■□□ 2.33
CHKA-206ENST00000531341 RAPGEF4Q8WZA2 1011 aa29.6■■■□□ 2.33
CHKA-206ENST00000531341 CGNL1Q0VF96 1302 aa29.58■■■□□ 2.33
CHKA-206ENST00000531341 TATP17735 454 aaPredicted RBP29.57■■■□□ 2.32
CHKA-206ENST00000531341 GRIN3BO60391 1043 aa29.55■■■□□ 2.32
CHKA-206ENST00000531341 MPRIPQ6WCQ1 1025 aa29.55■■■□□ 2.32
CHKA-206ENST00000531341 AMIGO3Q86WK7 504 aa29.55■■■□□ 2.32
CHKA-206ENST00000531341 CYP27B1O15528 508 aa29.54■■■□□ 2.32
CHKA-206ENST00000531341 SMIM5Q71RC9 77 aa29.54■■■□□ 2.32
CHKA-206ENST00000531341 SMG6Q86US8 1419 aaKnown RBP29.53■■■□□ 2.32
CHKA-206ENST00000531341 INSRP06213 1382 aa29.52■■■□□ 2.32
CHKA-206ENST00000531341 PALLDQ8WX93 1383 aa29.52■■■□□ 2.32
CHKA-206ENST00000531341 C5P01031 1676 aa29.52■■■□□ 2.32
CHKA-206ENST00000531341 PCDH11XQ9BZA7 1347 aa29.51■■■□□ 2.32
CHKA-206ENST00000531341 PCDH11YQ9BZA8 1340 aa29.51■■■□□ 2.32
CHKA-206ENST00000531341 SLC24A1O60721 1099 aa29.51■■■□□ 2.31
CHKA-206ENST00000531341 TMF1P82094 1093 aa29.5■■■□□ 2.31
CHKA-206ENST00000531341 CD2APQ9Y5K6 639 aa29.48■■■□□ 2.31
CHKA-206ENST00000531341 FLT4P35916 1363 aa29.48■■■□□ 2.31
CHKA-206ENST00000531341 TOGARAM1Q9Y4F4 1720 aa29.46■■■□□ 2.31
CHKA-206ENST00000531341 FLAD1Q8NFF5 587 aa29.46■■■□□ 2.31
CHKA-206ENST00000531341 CARD14Q9BXL6 1004 aa29.46■■■□□ 2.31
CHKA-206ENST00000531341 EMILIN1Q9Y6C2 1016 aa29.46■■■□□ 2.31
CHKA-206ENST00000531341 ATP10DQ9P241 1426 aa29.45■■■□□ 2.31
CHKA-206ENST00000531341 TAF1LQ8IZX4 1826 aa29.45■■■□□ 2.31
CHKA-206ENST00000531341 PIGBQ92521 554 aa29.45■■■□□ 2.31
CHKA-206ENST00000531341 PHF14O94880 888 aa29.43■■■□□ 2.3
CHKA-206ENST00000531341 WWC3Q9ULE0 1092 aa29.43■■■□□ 2.3
CHKA-206ENST00000531341 C4BP0C0L5 1744 aa29.42■■■□□ 2.3
CHKA-206ENST00000531341 AK7Q96M32 723 aa29.42■■■□□ 2.3
CHKA-206ENST00000531341 KIF24Q5T7B8 1368 aa29.4■■■□□ 2.3
CHKA-206ENST00000531341 SMARCC1Q92922 1105 aaPredicted RBP29.4■■■□□ 2.3
CHKA-206ENST00000531341 ITGB4P16144 1822 aa29.39■■■□□ 2.3
CHKA-206ENST00000531341 KIF20BQ96Q89 1820 aa29.39■■■□□ 2.3
CHKA-206ENST00000531341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.39■■■□□ 2.3
CHKA-206ENST00000531341 NKX1-1Q15270 411 aaPredicted RBP29.39■■■□□ 2.3
CHKA-206ENST00000531341 LINC00116Q8NCU8 138 aa29.39■■■□□ 2.3
CHKA-206ENST00000531341 PPM1GO15355 546 aaPredicted RBP29.37■■■□□ 2.29
CHKA-206ENST00000531341 ZNF526Q8TF50 670 aaPredicted RBP29.37■■■□□ 2.29
CHKA-206ENST00000531341 NCAPD2Q15021 1401 aa29.37■■■□□ 2.29
CHKA-206ENST00000531341 IGSF1Q8N6C5 1336 aa29.36■■■□□ 2.29
CHKA-206ENST00000531341 PKD1L3Q7Z443 1732 aa29.36■■■□□ 2.29
CHKA-206ENST00000531341 ADCY9O60503 1353 aa29.36■■■□□ 2.29
CHKA-206ENST00000531341 NSD3Q9BZ95 1437 aa29.36■■■□□ 2.29
CHKA-206ENST00000531341 GPBP1L1Q9HC44 474 aaPredicted RBP29.35■■■□□ 2.29
CHKA-206ENST00000531341 UBR3Q6ZT12 1888 aa29.34■■■□□ 2.29
CHKA-206ENST00000531341 LOC102724428A0A0B4J2F2 783 aa29.34■■■□□ 2.29
CHKA-206ENST00000531341 HMGB2P26583 209 aaKnown RBP29.34■■■□□ 2.29
CHKA-206ENST00000531341 SIK1P57059 783 aa29.34■■■□□ 2.29
CHKA-206ENST00000531341 EYA1Q99502 592 aa29.34■■■□□ 2.29
CHKA-206ENST00000531341 ASAP1Q9ULH1 1129 aa29.34■■■□□ 2.29
CHKA-206ENST00000531341 ITPK1Q13572 414 aa29.33■■■□□ 2.29
CHKA-206ENST00000531341 MAP2P11137 1827 aaKnown RBP29.33■■■□□ 2.29
CHKA-206ENST00000531341 SPG7Q9UQ90 795 aa29.32■■■□□ 2.28
CHKA-206ENST00000531341 SSFA2P28290 1259 aa29.31■■■□□ 2.28
CHKA-206ENST00000531341 CDCA8Q53HL2 280 aa29.31■■■□□ 2.28
CHKA-206ENST00000531341 WASHC2AQ641Q2 1341 aa29.3■■■□□ 2.28
CHKA-206ENST00000531341 IFFO2Q5TF58 517 aa29.3■■■□□ 2.28
CHKA-206ENST00000531341 TMOD3Q9NYL9 352 aa29.28■■■□□ 2.28
CHKA-206ENST00000531341 GNPATO15228 680 aa29.27■■■□□ 2.28
CHKA-206ENST00000531341 PHKG2P15735 406 aa29.27■■■□□ 2.28
CHKA-206ENST00000531341 ATP6V1AP38606 617 aa29.27■■■□□ 2.28
CHKA-206ENST00000531341 ATG3Q9NT62 314 aa29.27■■■□□ 2.28
CHKA-206ENST00000531341 POLKQ9UBT6 870 aa29.26■■■□□ 2.27
CHKA-206ENST00000531341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.25■■■□□ 2.274e-12■□□□□ 10.4
CHKA-206ENST00000531341 IFNL2Q8IZJ0 200 aa29.24■■■□□ 2.27
CHKA-206ENST00000531341 ANKRD26Q9UPS8 1709 aa29.23■■■□□ 2.27
CHKA-206ENST00000531341 HSPA6P17066 643 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms