RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 PRKAR2BP31323 418 aa18.49■□□□□ 0.55
BEST1-206ENST00000529265 DDB1Q16531 1140 aa18.49■□□□□ 0.55
BEST1-206ENST00000529265 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
BEST1-206ENST00000529265 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
BEST1-206ENST00000529265 MEGF6O75095 1541 aa18.48■□□□□ 0.55
BEST1-206ENST00000529265 KAT6BQ8WYB5 2073 aa18.48■□□□□ 0.55
BEST1-206ENST00000529265 DISP2A7MBM2 1401 aa18.48■□□□□ 0.55
BEST1-206ENST00000529265 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
BEST1-206ENST00000529265 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
BEST1-206ENST00000529265 PDE3BQ13370 1112 aa18.47■□□□□ 0.55
BEST1-206ENST00000529265 PLEKHO1Q53GL0 409 aaPredicted RBP18.47■□□□□ 0.55
BEST1-206ENST00000529265 ZCRB1Q8TBF4 217 aaKnown RBP18.47■□□□□ 0.55
BEST1-206ENST00000529265 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
BEST1-206ENST00000529265 BRWD3Q6RI45 1802 aa18.47■□□□□ 0.55
BEST1-206ENST00000529265 THSD7AQ9UPZ6 1657 aa18.46■□□□□ 0.55
BEST1-206ENST00000529265 OVOS2A0A0G2JMS6 1433 aa18.46■□□□□ 0.55
BEST1-206ENST00000529265 MAPK8IP3Q9UPT6 1336 aa18.45■□□□□ 0.54
BEST1-206ENST00000529265 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
BEST1-206ENST00000529265 LRRC37A3O60309 1634 aa18.45■□□□□ 0.54
BEST1-206ENST00000529265 CCDC146Q8IYE0 955 aa18.44■□□□□ 0.54
BEST1-206ENST00000529265 DDX54Q8TDD1 881 aaKnown RBP18.44■□□□□ 0.54
BEST1-206ENST00000529265 RGS12O14924 1447 aa18.44■□□□□ 0.54
BEST1-206ENST00000529265 PKD1L3Q7Z443 1732 aa18.42■□□□□ 0.54
BEST1-206ENST00000529265 KRT27Q7Z3Y8 459 aa18.42■□□□□ 0.54
BEST1-206ENST00000529265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.42■□□□□ 0.54
BEST1-206ENST00000529265 TNS2Q63HR2 1409 aa18.42■□□□□ 0.54
BEST1-206ENST00000529265 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
BEST1-206ENST00000529265 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
BEST1-206ENST00000529265 ZNF530Q6P9A1 599 aaPredicted RBP18.41■□□□□ 0.54
BEST1-206ENST00000529265 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
BEST1-206ENST00000529265 PHACTR3Q96KR7 559 aa18.41■□□□□ 0.54
BEST1-206ENST00000529265 PLEKHG2Q9H7P9 1386 aa18.41■□□□□ 0.54
BEST1-206ENST00000529265 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
BEST1-206ENST00000529265 C1orf141Q5JVX7 400 aa18.4■□□□□ 0.54
BEST1-206ENST00000529265 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
BEST1-206ENST00000529265 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
BEST1-206ENST00000529265 SHANK3Q9BYB0 1731 aa18.4■□□□□ 0.54
BEST1-206ENST00000529265 IFNL2Q8IZJ0 200 aa18.39■□□□□ 0.53
BEST1-206ENST00000529265 MARCH10Q8NA82 808 aaPredicted RBP18.38■□□□□ 0.53
BEST1-206ENST00000529265 DLG5Q8TDM6 1919 aa18.37■□□□□ 0.53
BEST1-206ENST00000529265 CYP27B1O15528 508 aa18.37■□□□□ 0.53
BEST1-206ENST00000529265 FAM182BQ5T319 152 aa18.37■□□□□ 0.53
BEST1-206ENST00000529265 PHKG2P15735 406 aa18.36■□□□□ 0.53
BEST1-206ENST00000529265 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
BEST1-206ENST00000529265 ILDR2Q71H61 639 aa18.36■□□□□ 0.53
BEST1-206ENST00000529265 VIRMAQ69YN4 1812 aaKnown RBP18.36■□□□□ 0.53
BEST1-206ENST00000529265 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
BEST1-206ENST00000529265 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
BEST1-206ENST00000529265 APAF1O14727 1248 aa18.34■□□□□ 0.53
BEST1-206ENST00000529265 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
BEST1-206ENST00000529265 GNAT3A8MTJ3 354 aa18.33■□□□□ 0.53
BEST1-206ENST00000529265 RIPK4P57078 832 aa18.33■□□□□ 0.53
BEST1-206ENST00000529265 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.53
BEST1-206ENST00000529265 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.53
BEST1-206ENST00000529265 MAP3K5Q99683 1374 aa18.33■□□□□ 0.52
BEST1-206ENST00000529265 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
BEST1-206ENST00000529265 TMPOP42166 694 aaKnown RBP18.32■□□□□ 0.52
BEST1-206ENST00000529265 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
BEST1-206ENST00000529265 FAM196AQ6ZSG2 479 aa18.32■□□□□ 0.52
BEST1-206ENST00000529265 NKX1-1Q15270 411 aaPredicted RBP18.31■□□□□ 0.52
BEST1-206ENST00000529265 ACSBG1Q96GR2 724 aa18.31■□□□□ 0.52
BEST1-206ENST00000529265 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
BEST1-206ENST00000529265 SCN11AQ9UI33 1791 aa18.3■□□□□ 0.52
BEST1-206ENST00000529265 LMOD3Q0VAK6 560 aa18.3■□□□□ 0.52
BEST1-206ENST00000529265 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
BEST1-206ENST00000529265 SBF2Q86WG5 1849 aa18.3■□□□□ 0.52
BEST1-206ENST00000529265 DOT1LQ8TEK3 1739 aa18.29■□□□□ 0.52
BEST1-206ENST00000529265 SALL2Q9Y467 1007 aaPredicted RBP18.29■□□□□ 0.52
BEST1-206ENST00000529265 RNMTO43148 476 aaKnown RBP18.28■□□□□ 0.52
BEST1-206ENST00000529265 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
BEST1-206ENST00000529265 LGR6Q9HBX8 967 aa18.28■□□□□ 0.52
BEST1-206ENST00000529265 ITGB4P16144 1822 aa18.28■□□□□ 0.52
BEST1-206ENST00000529265 DCTN1Q14203 1278 aa18.27■□□□□ 0.52
BEST1-206ENST00000529265 MCM10Q7L590 875 aa18.27■□□□□ 0.52
BEST1-206ENST00000529265 PRIM1P49642 420 aaKnown RBP18.26■□□□□ 0.51
BEST1-206ENST00000529265 CABP4P57796 275 aa18.26■□□□□ 0.51
BEST1-206ENST00000529265 KDM6AO15550 1401 aaPredicted RBP18.26■□□□□ 0.51
BEST1-206ENST00000529265 ERVV-2B6SEH9 535 aa18.25■□□□□ 0.51
BEST1-206ENST00000529265 BCL9O00512 1426 aa18.25■□□□□ 0.51
BEST1-206ENST00000529265 TRIM37O94972 964 aa18.25■□□□□ 0.51
BEST1-206ENST00000529265 TEFQ10587 303 aa18.25■□□□□ 0.51
BEST1-206ENST00000529265 IL17REQ8NFR9 667 aa18.25■□□□□ 0.51
BEST1-206ENST00000529265 TOGARAM1Q9Y4F4 1720 aa18.25■□□□□ 0.51
BEST1-206ENST00000529265 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
BEST1-206ENST00000529265 KCNQ2O43526 872 aa18.23■□□□□ 0.51
BEST1-206ENST00000529265 THUMPD2Q9BTF0 503 aaKnown RBP18.23■□□□□ 0.51
BEST1-206ENST00000529265 NFATC2IPQ8NCF5 419 aa18.23■□□□□ 0.51
BEST1-206ENST00000529265 SLC52A2Q9HAB3 445 aa18.23■□□□□ 0.51
BEST1-206ENST00000529265 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
BEST1-206ENST00000529265 NHSQ6T4R5 1651 aa18.23■□□□□ 0.51
BEST1-206ENST00000529265 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
BEST1-206ENST00000529265 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
BEST1-206ENST00000529265 BCL11BQ9C0K0 894 aaPredicted RBP18.22■□□□□ 0.51
BEST1-206ENST00000529265 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
BEST1-206ENST00000529265 SF3B2Q13435 895 aaKnown RBP18.21■□□□□ 0.51
BEST1-206ENST00000529265 CEMIPQ8WUJ3 1361 aa18.2■□□□□ 0.5
BEST1-206ENST00000529265 BTAF1O14981 1849 aa18.2■□□□□ 0.5
BEST1-206ENST00000529265 CCDC27Q2M243 656 aa18.2■□□□□ 0.5
BEST1-206ENST00000529265 PIGBQ92521 554 aa18.2■□□□□ 0.5
BEST1-206ENST00000529265 EP400Q96L91 3159 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms