RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 RAPGEF4Q8WZA2 1011 aa21.76■■□□□ 1.07
CTSB-215ENST00000528965 FLT4P35916 1363 aa21.75■■□□□ 1.07
CTSB-215ENST00000528965 ZNF827Q17R98 1081 aa21.75■■□□□ 1.07
CTSB-215ENST00000528965 INSRP06213 1382 aa21.74■■□□□ 1.07
CTSB-215ENST00000528965 FHDC1Q9C0D6 1143 aaPredicted RBP21.74■■□□□ 1.07
CTSB-215ENST00000528965 LRRC4BQ9NT99 713 aa21.74■■□□□ 1.07
CTSB-215ENST00000528965 RGPD2P0DJD1 1756 aa21.74■■□□□ 1.07
CTSB-215ENST00000528965 SHANK3Q9BYB0 1731 aa21.73■■□□□ 1.07
CTSB-215ENST00000528965 PRIM1P49642 420 aaKnown RBP21.73■■□□□ 1.07
CTSB-215ENST00000528965 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
CTSB-215ENST00000528965 TATP17735 454 aaPredicted RBP21.72■■□□□ 1.07
CTSB-215ENST00000528965 NBPF6Q5VWK0 638 aa21.72■■□□□ 1.07
CTSB-215ENST00000528965 SLC16A10Q8TF71 515 aa21.72■■□□□ 1.07
CTSB-215ENST00000528965 NBPF4Q96M43 638 aa21.72■■□□□ 1.07
CTSB-215ENST00000528965 ARXQ96QS3 562 aa21.72■■□□□ 1.07
CTSB-215ENST00000528965 SGIP1Q9BQI5 828 aa21.72■■□□□ 1.07
CTSB-215ENST00000528965 QSER1Q2KHR3 1735 aa21.72■■□□□ 1.07
CTSB-215ENST00000528965 NSD3Q9BZ95 1437 aa21.72■■□□□ 1.07
CTSB-215ENST00000528965 AKT1S1Q96B36 256 aa21.71■■□□□ 1.07
CTSB-215ENST00000528965 SYT17Q9BSW7 474 aa21.71■■□□□ 1.07
CTSB-215ENST00000528965 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
CTSB-215ENST00000528965 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
CTSB-215ENST00000528965 NSD2O96028 1365 aa21.71■■□□□ 1.07
CTSB-215ENST00000528965 MAP3K5Q99683 1374 aa21.71■■□□□ 1.07
CTSB-215ENST00000528965 USHBP1Q8N6Y0 703 aa21.7■■□□□ 1.06
CTSB-215ENST00000528965 HMGB2P26583 209 aaKnown RBP21.69■■□□□ 1.06
CTSB-215ENST00000528965 POLD1P28340 1107 aa21.69■■□□□ 1.06
CTSB-215ENST00000528965 TFCP2L1Q9NZI6 479 aa21.69■■□□□ 1.06
CTSB-215ENST00000528965 LY75O60449 1722 aa21.69■■□□□ 1.06
CTSB-215ENST00000528965 HSP90AB2PQ58FF8 381 aa21.68■■□□□ 1.06
CTSB-215ENST00000528965 CCNL1Q9UK58 526 aaPredicted RBP21.67■■□□□ 1.06
CTSB-215ENST00000528965 PNPLA7Q6ZV29 1317 aa21.66■■□□□ 1.06
CTSB-215ENST00000528965 CARD14Q9BXL6 1004 aa21.65■■□□□ 1.06
CTSB-215ENST00000528965 EMILIN1Q9Y6C2 1016 aa21.63■■□□□ 1.05
CTSB-215ENST00000528965 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
CTSB-215ENST00000528965 KCNQ4P56696 695 aa21.62■■□□□ 1.05
CTSB-215ENST00000528965 ANKRD26Q9UPS8 1709 aa21.62■■□□□ 1.05
CTSB-215ENST00000528965 TUBGCP6Q96RT7 1819 aa21.62■■□□□ 1.05
CTSB-215ENST00000528965 KLHL34Q8N239 644 aa21.61■■□□□ 1.05
CTSB-215ENST00000528965 PCGF6Q9BYE7 350 aa21.6■■□□□ 1.05
CTSB-215ENST00000528965 NCAPD2Q15021 1401 aa21.6■■□□□ 1.05
CTSB-215ENST00000528965 PKD1L3Q7Z443 1732 aa21.6■■□□□ 1.05
CTSB-215ENST00000528965 PALLDQ8WX93 1383 aa21.6■■□□□ 1.05
CTSB-215ENST00000528965 COL24A1Q17RW2 1714 aa21.59■■□□□ 1.05
CTSB-215ENST00000528965 MSH5O43196 834 aa21.58■■□□□ 1.05
CTSB-215ENST00000528965 SMARCC1Q92922 1105 aaPredicted RBP21.58■■□□□ 1.05
CTSB-215ENST00000528965 SPG7Q9UQ90 795 aa21.58■■□□□ 1.05
CTSB-215ENST00000528965 WASHC2AQ641Q2 1341 aa21.57■■□□□ 1.04
CTSB-215ENST00000528965 C5P01031 1676 aa21.57■■□□□ 1.04
CTSB-215ENST00000528965 MPRIPQ6WCQ1 1025 aa21.57■■□□□ 1.04
CTSB-215ENST00000528965 POLR3GLQ9BT43 218 aa21.57■■□□□ 1.04
CTSB-215ENST00000528965 CYP27B1O15528 508 aa21.56■■□□□ 1.04
CTSB-215ENST00000528965 GPR162Q16538 588 aa21.56■■□□□ 1.04
CTSB-215ENST00000528965 FLAD1Q8NFF5 587 aa21.56■■□□□ 1.04
CTSB-215ENST00000528965 PLEKHG2Q9H7P9 1386 aa21.54■■□□□ 1.04
CTSB-215ENST00000528965 EIF4G2P78344 907 aaKnown RBP eCLIP21.54■■□□□ 1.04
CTSB-215ENST00000528965 TOGARAM1Q9Y4F4 1720 aa21.54■■□□□ 1.04
CTSB-215ENST00000528965 COL23A1Q86Y22 540 aaPredicted RBP21.53■■□□□ 1.04
CTSB-215ENST00000528965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.53■■□□□ 1.04
CTSB-215ENST00000528965 CHD4Q14839 1912 aa21.53■■□□□ 1.04
CTSB-215ENST00000528965 ZNF784Q8NCA9 323 aaPredicted RBP21.52■■□□□ 1.04
CTSB-215ENST00000528965 NKX1-1Q15270 411 aaPredicted RBP21.51■■□□□ 1.03
CTSB-215ENST00000528965 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
CTSB-215ENST00000528965 AK7Q96M32 723 aa21.51■■□□□ 1.03
CTSB-215ENST00000528965 EYA1Q99502 592 aa21.51■■□□□ 1.03
CTSB-215ENST00000528965 POLKQ9UBT6 870 aa21.51■■□□□ 1.03
CTSB-215ENST00000528965 MAP2P11137 1827 aaKnown RBP21.5■■□□□ 1.03
CTSB-215ENST00000528965 ITGB4P16144 1822 aa21.5■■□□□ 1.03
CTSB-215ENST00000528965 TMOD3Q9NYL9 352 aa21.49■■□□□ 1.03
CTSB-215ENST00000528965 TAF1LQ8IZX4 1826 aa21.49■■□□□ 1.03
CTSB-215ENST00000528965 C4BP0C0L5 1744 aa21.49■■□□□ 1.03
CTSB-215ENST00000528965 MSL1Q68DK7 614 aa21.48■■□□□ 1.03
CTSB-215ENST00000528965 IFNL2Q8IZJ0 200 aa21.48■■□□□ 1.03
CTSB-215ENST00000528965 PIGBQ92521 554 aa21.48■■□□□ 1.03
CTSB-215ENST00000528965 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
CTSB-215ENST00000528965 HSPA5P11021 654 aaKnown RBP21.46■■□□□ 1.03
CTSB-215ENST00000528965 EIF4A2Q14240 407 aaKnown RBP21.46■■□□□ 1.03
CTSB-215ENST00000528965 NLGN2Q8NFZ4 835 aa21.46■■□□□ 1.03
CTSB-215ENST00000528965 UTRNP46939 3433 aa21.45■■□□□ 1.02
CTSB-215ENST00000528965 PHKG2P15735 406 aa21.45■■□□□ 1.02
CTSB-215ENST00000528965 LOC102724428A0A0B4J2F2 783 aa21.44■■□□□ 1.02
CTSB-215ENST00000528965 GRIN3BO60391 1043 aa21.44■■□□□ 1.02
CTSB-215ENST00000528965 SIK1P57059 783 aa21.44■■□□□ 1.02
CTSB-215ENST00000528965 CCER1Q8TC90 406 aaPredicted RBP21.44■■□□□ 1.02
CTSB-215ENST00000528965 PANK3Q9H999 370 aa21.43■■□□□ 1.02
CTSB-215ENST00000528965 IGSF1Q8N6C5 1336 aa21.43■■□□□ 1.02
CTSB-215ENST00000528965 PHF14O94880 888 aa21.42■■□□□ 1.02
CTSB-215ENST00000528965 HSP90AB1P08238 724 aaKnown RBP21.42■■□□□ 1.02
CTSB-215ENST00000528965 SSFA2P28290 1259 aa21.42■■□□□ 1.02
CTSB-215ENST00000528965 CD2APQ9Y5K6 639 aa21.42■■□□□ 1.02
CTSB-215ENST00000528965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.41■■□□□ 1.02
CTSB-215ENST00000528965 UBR3Q6ZT12 1888 aa21.4■■□□□ 1.02
CTSB-215ENST00000528965 PLEKHO1Q53GL0 409 aaPredicted RBP21.39■■□□□ 1.01
CTSB-215ENST00000528965 MORC1Q86VD1 984 aa21.39■■□□□ 1.01
CTSB-215ENST00000528965 ATP6V1AP38606 617 aa21.38■■□□□ 1.01
CTSB-215ENST00000528965 LINC00116Q8NCU8 138 aa21.38■■□□□ 1.01
CTSB-215ENST00000528965 ASAP1Q9ULH1 1129 aa21.38■■□□□ 1.01
CTSB-215ENST00000528965 ERVV-2B6SEH9 535 aa21.37■■□□□ 1.01
CTSB-215ENST00000528965 GNPATO15228 680 aa21.37■■□□□ 1.01
CTSB-215ENST00000528965 AMOTQ4VCS5 1084 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms