RNA–Protein interactions for RNA: ENST00000527875.1

FOXRED1-208, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-208ENST00000527875 EXOC5O00471 708 aa23.04■■□□□ 1.28
FOXRED1-208ENST00000527875 HMOX1P09601 288 aa23.04■■□□□ 1.28
FOXRED1-208ENST00000527875 PKD1L3Q7Z443 1732 aa23.04■■□□□ 1.28
FOXRED1-208ENST00000527875 PDE3BQ13370 1112 aa23.03■■□□□ 1.28
FOXRED1-208ENST00000527875 DIEXFQ68CQ4 756 aaKnown RBP23.02■■□□□ 1.28
FOXRED1-208ENST00000527875 U2AF1L5P0DN76 240 aaPredicted RBP23■■□□□ 1.27
FOXRED1-208ENST00000527875 U2AF1Q01081 240 aaKnown RBP eCLIP23■■□□□ 1.27
FOXRED1-208ENST00000527875 ZCRB1Q8TBF4 217 aaKnown RBP23■■□□□ 1.27
FOXRED1-208ENST00000527875 FAM182BQ5T319 152 aa22.99■■□□□ 1.27
FOXRED1-208ENST00000527875 CCDC184Q52MB2 194 aa22.98■■□□□ 1.27
FOXRED1-208ENST00000527875 MARCH10Q8NA82 808 aaPredicted RBP22.98■■□□□ 1.27
FOXRED1-208ENST00000527875 DDX54Q8TDD1 881 aaKnown RBP22.96■■□□□ 1.27
FOXRED1-208ENST00000527875 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
FOXRED1-208ENST00000527875 PLEKHG2Q9H7P9 1386 aa22.96■■□□□ 1.27
FOXRED1-208ENST00000527875 EP400Q96L91 3159 aa22.96■■□□□ 1.27
FOXRED1-208ENST00000527875 RSPH6AQ9H0K4 717 aa22.95■■□□□ 1.26
FOXRED1-208ENST00000527875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.95■■□□□ 1.26
FOXRED1-208ENST00000527875 PCDH11XQ9BZA7 1347 aa22.94■■□□□ 1.26
FOXRED1-208ENST00000527875 PCDH11YQ9BZA8 1340 aa22.94■■□□□ 1.26
FOXRED1-208ENST00000527875 SBF2Q86WG5 1849 aa22.94■■□□□ 1.26
FOXRED1-208ENST00000527875 PLEKHO1Q53GL0 409 aaPredicted RBP22.93■■□□□ 1.26
FOXRED1-208ENST00000527875 MRS2Q9HD23 443 aa22.93■■□□□ 1.26
FOXRED1-208ENST00000527875 FCHSD2O94868 740 aa22.92■■□□□ 1.26
FOXRED1-208ENST00000527875 PRKAR2BP31323 418 aa22.92■■□□□ 1.26
FOXRED1-208ENST00000527875 WDR43Q15061 677 aaKnown RBP eCLIP22.92■■□□□ 1.26
FOXRED1-208ENST00000527875 AMOTQ4VCS5 1084 aa22.92■■□□□ 1.26
FOXRED1-208ENST00000527875 KAT6BQ8WYB5 2073 aa22.92■■□□□ 1.26
FOXRED1-208ENST00000527875 CYP27B1O15528 508 aa22.91■■□□□ 1.26
FOXRED1-208ENST00000527875 FAM196AQ6ZSG2 479 aa22.91■■□□□ 1.26
FOXRED1-208ENST00000527875 DOT1LQ8TEK3 1739 aa22.89■■□□□ 1.26
FOXRED1-208ENST00000527875 ZNF530Q6P9A1 599 aaPredicted RBP22.89■■□□□ 1.25
FOXRED1-208ENST00000527875 BCL9O00512 1426 aa22.88■■□□□ 1.25
FOXRED1-208ENST00000527875 VIRMAQ69YN4 1812 aaKnown RBP22.87■■□□□ 1.25
FOXRED1-208ENST00000527875 PHKG2P15735 406 aa22.87■■□□□ 1.25
FOXRED1-208ENST00000527875 MTHFSDQ2M296 383 aaKnown RBP22.87■■□□□ 1.25
FOXRED1-208ENST00000527875 IFNL2Q8IZJ0 200 aa22.87■■□□□ 1.25
FOXRED1-208ENST00000527875 PHACTR3Q96KR7 559 aa22.87■■□□□ 1.25
FOXRED1-208ENST00000527875 ADAMTS8Q9UP79 889 aa22.87■■□□□ 1.25
FOXRED1-208ENST00000527875 TOGARAM1Q9Y4F4 1720 aa22.86■■□□□ 1.25
FOXRED1-208ENST00000527875 NHSQ6T4R5 1651 aa22.85■■□□□ 1.25
FOXRED1-208ENST00000527875 C1orf141Q5JVX7 400 aa22.85■■□□□ 1.25
FOXRED1-208ENST00000527875 PLEKHF1Q96S99 279 aa22.85■■□□□ 1.25
FOXRED1-208ENST00000527875 PNNQ9H307 717 aaKnown RBP22.85■■□□□ 1.25
FOXRED1-208ENST00000527875 MIER1Q8N108 512 aa22.84■■□□□ 1.25
FOXRED1-208ENST00000527875 PNISRQ8TF01 805 aaKnown RBP22.84■■□□□ 1.25
FOXRED1-208ENST00000527875 ACSBG1Q96GR2 724 aa22.84■■□□□ 1.25
FOXRED1-208ENST00000527875 TNS1Q9HBL0 1735 aaKnown RBP22.84■■□□□ 1.25
FOXRED1-208ENST00000527875 ITGB4P16144 1822 aa22.83■■□□□ 1.25
FOXRED1-208ENST00000527875 DLG5Q8TDM6 1919 aa22.83■■□□□ 1.25
FOXRED1-208ENST00000527875 TRIM37O94972 964 aa22.83■■□□□ 1.25
FOXRED1-208ENST00000527875 NEFMP07197 916 aa22.83■■□□□ 1.25
FOXRED1-208ENST00000527875 NKX1-1Q15270 411 aaPredicted RBP22.83■■□□□ 1.25
FOXRED1-208ENST00000527875 SCN11AQ9UI33 1791 aa22.82■■□□□ 1.24
FOXRED1-208ENST00000527875 CCDC146Q8IYE0 955 aa22.82■■□□□ 1.24
FOXRED1-208ENST00000527875 GAS2L2Q8NHY3 880 aa22.82■■□□□ 1.24
FOXRED1-208ENST00000527875 UPF1Q92900 1129 aaKnown RBP eCLIP22.82■■□□□ 1.24
FOXRED1-208ENST00000527875 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
FOXRED1-208ENST00000527875 AKAP4Q5JQC9 854 aa22.81■■□□□ 1.24
FOXRED1-208ENST00000527875 CCER2I3L3R5 266 aa22.8■■□□□ 1.24
FOXRED1-208ENST00000527875 HSP90AB1P08238 724 aaKnown RBP22.8■■□□□ 1.24
FOXRED1-208ENST00000527875 KCNQ2O43526 872 aa22.79■■□□□ 1.24
FOXRED1-208ENST00000527875 PTF1AQ7RTS3 328 aa22.79■■□□□ 1.24
FOXRED1-208ENST00000527875 BTAF1O14981 1849 aa22.79■■□□□ 1.24
FOXRED1-208ENST00000527875 KDM6AO15550 1401 aaPredicted RBP22.79■■□□□ 1.24
FOXRED1-208ENST00000527875 MAP3K5Q99683 1374 aa22.78■■□□□ 1.24
FOXRED1-208ENST00000527875 PRIM1P49642 420 aaKnown RBP22.78■■□□□ 1.24
FOXRED1-208ENST00000527875 MPRIPQ6WCQ1 1025 aa22.78■■□□□ 1.24
FOXRED1-208ENST00000527875 SYTL4Q96C24 671 aaPredicted RBP22.78■■□□□ 1.24
FOXRED1-208ENST00000527875 RUNDC1Q96C34 613 aa22.78■■□□□ 1.24
FOXRED1-208ENST00000527875 DCAF5Q96JK2 942 aa22.78■■□□□ 1.24
FOXRED1-208ENST00000527875 ADAMTS7Q9UKP4 1686 aa22.77■■□□□ 1.24
FOXRED1-208ENST00000527875 BCL11BQ9C0K0 894 aaPredicted RBP22.77■■□□□ 1.24
FOXRED1-208ENST00000527875 GNAT3A8MTJ3 354 aa22.76■■□□□ 1.23
FOXRED1-208ENST00000527875 SF3B2Q13435 895 aaKnown RBP22.76■■□□□ 1.23
FOXRED1-208ENST00000527875 CCDC125Q86Z20 511 aa22.76■■□□□ 1.23
FOXRED1-208ENST00000527875 NFE2L2Q16236 605 aa22.75■■□□□ 1.23
FOXRED1-208ENST00000527875 FAM9BQ8IZU0 186 aa22.75■■□□□ 1.23
FOXRED1-208ENST00000527875 LGR6Q9HBX8 967 aa22.74■■□□□ 1.23
FOXRED1-208ENST00000527875 RNMTO43148 476 aaKnown RBP22.73■■□□□ 1.23
FOXRED1-208ENST00000527875 ERVV-2B6SEH9 535 aa22.72■■□□□ 1.23
FOXRED1-208ENST00000527875 APBA3O96018 575 aa22.72■■□□□ 1.23
FOXRED1-208ENST00000527875 TMPOP42166 694 aaKnown RBP22.71■■□□□ 1.23
FOXRED1-208ENST00000527875 TMOD3Q9NYL9 352 aa22.71■■□□□ 1.23
FOXRED1-208ENST00000527875 CABP4P57796 275 aa22.7■■□□□ 1.22
FOXRED1-208ENST00000527875 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
FOXRED1-208ENST00000527875 RTF1Q92541 710 aaKnown RBP22.7■■□□□ 1.22
FOXRED1-208ENST00000527875 RRP7AQ9Y3A4 280 aaKnown RBP22.7■■□□□ 1.22
FOXRED1-208ENST00000527875 SIPA1L3O60292 1781 aaPredicted RBP22.69■■□□□ 1.22
FOXRED1-208ENST00000527875 MRC1P22897 1456 aa22.69■■□□□ 1.22
FOXRED1-208ENST00000527875 BAG6P46379 1132 aa22.69■■□□□ 1.22
FOXRED1-208ENST00000527875 RIPK4P57078 832 aa22.69■■□□□ 1.22
FOXRED1-208ENST00000527875 DEFB132Q7Z7B7 95 aa22.69■■□□□ 1.22
FOXRED1-208ENST00000527875 PIGBQ92521 554 aa22.69■■□□□ 1.22
FOXRED1-208ENST00000527875 RGPD3A6NKT7 1758 aaPredicted RBP22.68■■□□□ 1.22
FOXRED1-208ENST00000527875 RGPD4Q7Z3J3 1758 aa22.68■■□□□ 1.22
FOXRED1-208ENST00000527875 APAF1O14727 1248 aa22.68■■□□□ 1.22
FOXRED1-208ENST00000527875 HTATSF1O43719 755 aaKnown RBP22.68■■□□□ 1.22
FOXRED1-208ENST00000527875 DCTN1Q14203 1278 aa22.68■■□□□ 1.22
FOXRED1-208ENST00000527875 NEUROD2Q15784 382 aa22.68■■□□□ 1.22
FOXRED1-208ENST00000527875 MCM10Q7L590 875 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms