RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 KCNH5Q8NCM2 988 aa22.02■■□□□ 1.11
PCDHA6-202ENST00000527624 GAS2L2Q8NHY3 880 aa22.02■■□□□ 1.11
PCDHA6-202ENST00000527624 MIS18AQ9NYP9 233 aa22.02■■□□□ 1.11
PCDHA6-202ENST00000527624 ZBTB47Q9UFB7 747 aaPredicted RBP22.02■■□□□ 1.11
PCDHA6-202ENST00000527624 CRB1P82279 1406 aa22.01■■□□□ 1.11
PCDHA6-202ENST00000527624 KRT28Q7Z3Y7 464 aa22.01■■□□□ 1.11
PCDHA6-202ENST00000527624 LTN1O94822 1766 aa22.01■■□□□ 1.11
PCDHA6-202ENST00000527624 ATF3P18847 181 aa22■■□□□ 1.11
PCDHA6-202ENST00000527624 GCP02774 474 aa21.99■■□□□ 1.11
PCDHA6-202ENST00000527624 RWDD1Q9H446 243 aaPredicted RBP21.99■■□□□ 1.11
PCDHA6-202ENST00000527624 STRCP1A6NGW2 1772 aa21.98■■□□□ 1.11
PCDHA6-202ENST00000527624 NPM2Q86SE8 214 aaKnown RBP21.98■■□□□ 1.11
PCDHA6-202ENST00000527624 NBPF6Q5VWK0 638 aa21.96■■□□□ 1.11
PCDHA6-202ENST00000527624 DDX17Q92841 729 aaKnown RBP21.96■■□□□ 1.11
PCDHA6-202ENST00000527624 NBPF4Q96M43 638 aa21.96■■□□□ 1.11
PCDHA6-202ENST00000527624 ARHGAP45Q92619 1136 aa21.96■■□□□ 1.11
PCDHA6-202ENST00000527624 ZBTB40Q9NUA8 1239 aa21.96■■□□□ 1.11
PCDHA6-202ENST00000527624 MST1RQ04912 1400 aa21.95■■□□□ 1.11
PCDHA6-202ENST00000527624 TSPYL4Q9UJ04 414 aa21.95■■□□□ 1.1
PCDHA6-202ENST00000527624 GNAT3A8MTJ3 354 aa21.95■■□□□ 1.1
PCDHA6-202ENST00000527624 LRRC59Q96AG4 307 aaKnown RBP21.94■■□□□ 1.1
PCDHA6-202ENST00000527624 ARHGEF25Q86VW2 580 aa21.94■■□□□ 1.1
PCDHA6-202ENST00000527624 KIAA0232Q92628 1395 aa21.93■■□□□ 1.1
PCDHA6-202ENST00000527624 KIF1AQ12756 1690 aa21.93■■□□□ 1.1
PCDHA6-202ENST00000527624 TRPM3Q9HCF6 1732 aaPredicted RBP21.93■■□□□ 1.1
PCDHA6-202ENST00000527624 FAM161AQ3B820 660 aa21.92■■□□□ 1.1
PCDHA6-202ENST00000527624 PDZRN3Q9UPQ7 1066 aa21.92■■□□□ 1.1
PCDHA6-202ENST00000527624 USP19O94966 1318 aa21.92■■□□□ 1.1
PCDHA6-202ENST00000527624 SLIT3O75094 1523 aa21.92■■□□□ 1.1
PCDHA6-202ENST00000527624 MSH6P52701 1360 aa21.92■■□□□ 1.1
PCDHA6-202ENST00000527624 MAP3K5Q99683 1374 aa21.92■■□□□ 1.1
PCDHA6-202ENST00000527624 ABCC4O15439 1325 aa21.91■■□□□ 1.1
PCDHA6-202ENST00000527624 HTATSF1O43719 755 aaKnown RBP21.91■■□□□ 1.1
PCDHA6-202ENST00000527624 C8orf34Q49A92 452 aa21.91■■□□□ 1.1
PCDHA6-202ENST00000527624 IL17REQ8NFR9 667 aa21.9■■□□□ 1.1
PCDHA6-202ENST00000527624 HAP1P54257 671 aaPredicted RBP21.9■■□□□ 1.1
PCDHA6-202ENST00000527624 HDAC1Q13547 482 aaPredicted RBP21.9■■□□□ 1.1
PCDHA6-202ENST00000527624 API5Q9BZZ5 524 aaKnown RBP21.9■■□□□ 1.1
PCDHA6-202ENST00000527624 DCCP43146 1447 aa21.89■■□□□ 1.1
PCDHA6-202ENST00000527624 CADPS2Q86UW7 1296 aa21.89■■□□□ 1.09
PCDHA6-202ENST00000527624 ZBTB7BO15156 539 aaPredicted RBP21.88■■□□□ 1.09
PCDHA6-202ENST00000527624 AXIN2Q9Y2T1 843 aa21.88■■□□□ 1.09
PCDHA6-202ENST00000527624 NCOA3Q9Y6Q9 1424 aa21.88■■□□□ 1.09
PCDHA6-202ENST00000527624 PHRF1Q9P1Y6 1649 aaKnown RBP21.87■■□□□ 1.09
PCDHA6-202ENST00000527624 ZC3H6P61129 1189 aaKnown RBP21.87■■□□□ 1.09
PCDHA6-202ENST00000527624 ANKRD24Q8TF21 1146 aa21.87■■□□□ 1.09
PCDHA6-202ENST00000527624 C1orf115Q9H7X2 142 aa21.87■■□□□ 1.09
PCDHA6-202ENST00000527624 LMTK3Q96Q04 1460 aa21.87■■□□□ 1.09
PCDHA6-202ENST00000527624 LRRC37A3O60309 1634 aa21.86■■□□□ 1.09
PCDHA6-202ENST00000527624 RGPD2P0DJD1 1756 aa21.85■■□□□ 1.09
PCDHA6-202ENST00000527624 SLC4A2P04920 1241 aa21.84■■□□□ 1.09
PCDHA6-202ENST00000527624 NBR1Q14596 966 aa21.84■■□□□ 1.09
PCDHA6-202ENST00000527624 MED1Q15648 1581 aaPredicted RBP21.83■■□□□ 1.09
PCDHA6-202ENST00000527624 ALS2Q96Q42 1657 aa21.83■■□□□ 1.08
PCDHA6-202ENST00000527624 TAF7Q15545 349 aaPredicted RBP21.83■■□□□ 1.08
PCDHA6-202ENST00000527624 NPHP3Q7Z494 1330 aa21.82■■□□□ 1.08
PCDHA6-202ENST00000527624 RGS12O14924 1447 aa21.82■■□□□ 1.08
PCDHA6-202ENST00000527624 CABLES1Q8TDN4 633 aa21.82■■□□□ 1.08
PCDHA6-202ENST00000527624 CHMP4BQ9H444 224 aaKnown RBP21.82■■□□□ 1.08
PCDHA6-202ENST00000527624 ZNF530Q6P9A1 599 aaPredicted RBP21.81■■□□□ 1.08
PCDHA6-202ENST00000527624 SMC5Q8IY18 1101 aa21.81■■□□□ 1.08
PCDHA6-202ENST00000527624 LGR6Q9HBX8 967 aa21.81■■□□□ 1.08
PCDHA6-202ENST00000527624 DDRGK1Q96HY6 314 aa21.8■■□□□ 1.08
PCDHA6-202ENST00000527624 G2E3Q7L622 706 aa21.8■■□□□ 1.08
PCDHA6-202ENST00000527624 NECTIN2Q92692 538 aa21.8■■□□□ 1.08
PCDHA6-202ENST00000527624 PTPRCP08575 1304 aa21.8■■□□□ 1.08
PCDHA6-202ENST00000527624 ZNF335Q9H4Z2 1342 aaPredicted RBP21.8■■□□□ 1.08
PCDHA6-202ENST00000527624 PLEKHO1Q53GL0 409 aaPredicted RBP21.79■■□□□ 1.08
PCDHA6-202ENST00000527624 STRCQ7RTU9 1775 aa21.79■■□□□ 1.08
PCDHA6-202ENST00000527624 INTS3Q68E01 1043 aaKnown RBP21.79■■□□□ 1.08
PCDHA6-202ENST00000527624 CEMIPQ8WUJ3 1361 aa21.79■■□□□ 1.08
PCDHA6-202ENST00000527624 ERBB3P21860 1342 aa21.78■■□□□ 1.08
PCDHA6-202ENST00000527624 MPRIPQ6WCQ1 1025 aa21.78■■□□□ 1.08
PCDHA6-202ENST00000527624 NCAPD2Q15021 1401 aa21.77■■□□□ 1.08
PCDHA6-202ENST00000527624 TNS3Q68CZ2 1445 aa21.77■■□□□ 1.08
PCDHA6-202ENST00000527624 STK31Q9BXU1 1019 aa21.77■■□□□ 1.08
PCDHA6-202ENST00000527624 PXDNQ92626 1479 aa21.77■■□□□ 1.07
PCDHA6-202ENST00000527624 AKAP4Q5JQC9 854 aa21.76■■□□□ 1.07
PCDHA6-202ENST00000527624 SIRT2Q8IXJ6 389 aa21.76■■□□□ 1.07
PCDHA6-202ENST00000527624 AMOTQ4VCS5 1084 aa21.76■■□□□ 1.07
PCDHA6-202ENST00000527624 BRINP3Q76B58 766 aa21.76■■□□□ 1.07
PCDHA6-202ENST00000527624 BABAM1Q9NWV8 329 aa21.76■■□□□ 1.07
PCDHA6-202ENST00000527624 XIRP1Q702N8 1843 aaKnown RBP21.75■■□□□ 1.07
PCDHA6-202ENST00000527624 F6X3S4 739 aa21.75■■□□□ 1.07
PCDHA6-202ENST00000527624 SPATA31A3Q5VYP0 1347 aa21.74■■□□□ 1.07
PCDHA6-202ENST00000527624 CHRNA2Q15822 529 aa21.74■■□□□ 1.07
PCDHA6-202ENST00000527624 C1orf141Q5JVX7 400 aa21.74■■□□□ 1.07
PCDHA6-202ENST00000527624 CCDC30Q5VVM6 783 aa21.74■■□□□ 1.07
PCDHA6-202ENST00000527624 NLRP2Q9NX02 1062 aa21.74■■□□□ 1.07
PCDHA6-202ENST00000527624 RGPD5Q99666 1765 aa21.74■■□□□ 1.07
PCDHA6-202ENST00000527624 NUCB1Q02818 461 aa21.74■■□□□ 1.07
PCDHA6-202ENST00000527624 SLC4A10Q6U841 1118 aa21.74■■□□□ 1.07
PCDHA6-202ENST00000527624 TEFQ10587 303 aa21.73■■□□□ 1.07
PCDHA6-202ENST00000527624 LNPKQ9C0E8 428 aa21.73■■□□□ 1.07
PCDHA6-202ENST00000527624 SEC24BO95487 1268 aa21.72■■□□□ 1.07
PCDHA6-202ENST00000527624 KCNQ3O43525 872 aa21.71■■□□□ 1.07
PCDHA6-202ENST00000527624 FLIIQ13045 1269 aa21.71■■□□□ 1.07
PCDHA6-202ENST00000527624 CHD1LQ86WJ1 897 aa21.71■■□□□ 1.07
PCDHA6-202ENST00000527624 MEIS3Q99687 375 aa21.71■■□□□ 1.07
PCDHA6-202ENST00000527624 CAMTA1Q9Y6Y1 1673 aa21.7■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms