RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 HDGFL2Q7Z4V5 671 aaPredicted RBP16.43■□□□□ 0.22
RPUSD4-203ENST00000526942 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
RPUSD4-203ENST00000526942 TMC1Q8TDI8 760 aa16.43■□□□□ 0.22
RPUSD4-203ENST00000526942 IP6K1Q92551 441 aa16.43■□□□□ 0.22
RPUSD4-203ENST00000526942 LY75O60449 1722 aa16.43■□□□□ 0.22
RPUSD4-203ENST00000526942 DOT1LQ8TEK3 1739 aa16.43■□□□□ 0.22
RPUSD4-203ENST00000526942 NSD2O96028 1365 aa16.43■□□□□ 0.22
RPUSD4-203ENST00000526942 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
RPUSD4-203ENST00000526942 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
RPUSD4-203ENST00000526942 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
RPUSD4-203ENST00000526942 SLC12A5Q9H2X9 1139 aa16.41■□□□□ 0.22
RPUSD4-203ENST00000526942 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
RPUSD4-203ENST00000526942 IFFO2Q5TF58 517 aa16.41■□□□□ 0.22
RPUSD4-203ENST00000526942 LTV1Q96GA3 475 aaPredicted RBP16.41■□□□□ 0.22
RPUSD4-203ENST00000526942 YBX3P16989 372 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPUSD4-203ENST00000526942 GRIN3BO60391 1043 aa16.38■□□□□ 0.21
RPUSD4-203ENST00000526942 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
RPUSD4-203ENST00000526942 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
RPUSD4-203ENST00000526942 MEGF6O75095 1541 aa16.38■□□□□ 0.21
RPUSD4-203ENST00000526942 MSH5O43196 834 aa16.36■□□□□ 0.21
RPUSD4-203ENST00000526942 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
RPUSD4-203ENST00000526942 ZCRB1Q8TBF4 217 aaKnown RBP16.36■□□□□ 0.21
RPUSD4-203ENST00000526942 CARD11Q9BXL7 1154 aa16.36■□□□□ 0.21
RPUSD4-203ENST00000526942 GTF3C3Q9Y5Q9 886 aa16.36■□□□□ 0.21
RPUSD4-203ENST00000526942 MAP3K19Q56UN5 1328 aa16.36■□□□□ 0.21
RPUSD4-203ENST00000526942 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
RPUSD4-203ENST00000526942 HOXC9P31274 260 aa16.36■□□□□ 0.21
RPUSD4-203ENST00000526942 USP47Q96K76 1375 aa16.35■□□□□ 0.21
RPUSD4-203ENST00000526942 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
RPUSD4-203ENST00000526942 RGPD2P0DJD1 1756 aa16.34■□□□□ 0.21
RPUSD4-203ENST00000526942 AMPHP49418 695 aa16.33■□□□□ 0.21
RPUSD4-203ENST00000526942 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.21
RPUSD4-203ENST00000526942 COG3Q96JB2 828 aa16.33■□□□□ 0.2
RPUSD4-203ENST00000526942 FBLN1P23142 703 aa16.32■□□□□ 0.2
RPUSD4-203ENST00000526942 C5P01031 1676 aa16.32■□□□□ 0.2
RPUSD4-203ENST00000526942 CD2APQ9Y5K6 639 aa16.31■□□□□ 0.2
RPUSD4-203ENST00000526942 RTL1A6NKG5 1358 aa16.31■□□□□ 0.2
RPUSD4-203ENST00000526942 ADCY9O60503 1353 aa16.3■□□□□ 0.2
RPUSD4-203ENST00000526942 CGNL1Q0VF96 1302 aa16.29■□□□□ 0.2
RPUSD4-203ENST00000526942 NBPF6Q5VWK0 638 aa16.29■□□□□ 0.2
RPUSD4-203ENST00000526942 NBPF4Q96M43 638 aa16.29■□□□□ 0.2
RPUSD4-203ENST00000526942 GPBP1L1Q9HC44 474 aaPredicted RBP16.29■□□□□ 0.2
RPUSD4-203ENST00000526942 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
RPUSD4-203ENST00000526942 FLAD1Q8NFF5 587 aa16.28■□□□□ 0.2
RPUSD4-203ENST00000526942 PALLDQ8WX93 1383 aa16.27■□□□□ 0.2
RPUSD4-203ENST00000526942 RRS1Q15050 365 aaKnown RBP16.27■□□□□ 0.2
RPUSD4-203ENST00000526942 RAPGEF4Q8WZA2 1011 aa16.27■□□□□ 0.2
RPUSD4-203ENST00000526942 TAF1LQ8IZX4 1826 aa16.26■□□□□ 0.19
RPUSD4-203ENST00000526942 SMG6Q86US8 1419 aaKnown RBP16.26■□□□□ 0.19
RPUSD4-203ENST00000526942 HSPA6P17066 643 aa16.26■□□□□ 0.19
RPUSD4-203ENST00000526942 PCDH11XQ9BZA7 1347 aa16.25■□□□□ 0.19
RPUSD4-203ENST00000526942 PCDH11YQ9BZA8 1340 aa16.25■□□□□ 0.19
RPUSD4-203ENST00000526942 TATP17735 454 aaPredicted RBP16.25■□□□□ 0.19
RPUSD4-203ENST00000526942 HMGB2P26583 209 aaKnown RBP16.25■□□□□ 0.19
RPUSD4-203ENST00000526942 ZNF526Q8TF50 670 aaPredicted RBP16.25■□□□□ 0.19
RPUSD4-203ENST00000526942 TESK2Q96S53 571 aa16.25■□□□□ 0.19
RPUSD4-203ENST00000526942 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
RPUSD4-203ENST00000526942 TOGARAM1Q9Y4F4 1720 aa16.25■□□□□ 0.19
RPUSD4-203ENST00000526942 IGSF1Q8N6C5 1336 aa16.23■□□□□ 0.19
RPUSD4-203ENST00000526942 MPRIPQ6WCQ1 1025 aa16.23■□□□□ 0.19
RPUSD4-203ENST00000526942 AMIGO3Q86WK7 504 aa16.23■□□□□ 0.19
RPUSD4-203ENST00000526942 AK7Q96M32 723 aa16.23■□□□□ 0.19
RPUSD4-203ENST00000526942 GGNBP2Q9H3C7 697 aa16.21■□□□□ 0.19
RPUSD4-203ENST00000526942 INSRP06213 1382 aa16.21■□□□□ 0.19
RPUSD4-203ENST00000526942 NSD3Q9BZ95 1437 aa16.21■□□□□ 0.19
RPUSD4-203ENST00000526942 UBR3Q6ZT12 1888 aa16.21■□□□□ 0.18
RPUSD4-203ENST00000526942 ST20-MTHFSA0A0A6YYL1 179 aa16.21■□□□□ 0.18
RPUSD4-203ENST00000526942 FYB1O15117 783 aa16.21■□□□□ 0.18
RPUSD4-203ENST00000526942 CYP27B1O15528 508 aa16.21■□□□□ 0.18
RPUSD4-203ENST00000526942 SMARCC1Q92922 1105 aaPredicted RBP16.21■□□□□ 0.18
RPUSD4-203ENST00000526942 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.18
RPUSD4-203ENST00000526942 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
RPUSD4-203ENST00000526942 PHF14O94880 888 aa16.2■□□□□ 0.18
RPUSD4-203ENST00000526942 HSP90AB2PQ58FF8 381 aa16.2■□□□□ 0.18
RPUSD4-203ENST00000526942 FLT4P35916 1363 aa16.19■□□□□ 0.18
RPUSD4-203ENST00000526942 SMIM5Q71RC9 77 aa16.19■□□□□ 0.18
RPUSD4-203ENST00000526942 ITGB4P16144 1822 aa16.19■□□□□ 0.18
RPUSD4-203ENST00000526942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.18■□□□□ 0.18
RPUSD4-203ENST00000526942 PKD1L3Q7Z443 1732 aa16.18■□□□□ 0.18
RPUSD4-203ENST00000526942 CICQ96RK0 1608 aaPredicted RBP16.18■□□□□ 0.18
RPUSD4-203ENST00000526942 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
RPUSD4-203ENST00000526942 SSFA2P28290 1259 aa16.18■□□□□ 0.18
RPUSD4-203ENST00000526942 KIF24Q5T7B8 1368 aa16.17■□□□□ 0.18
RPUSD4-203ENST00000526942 KIF3CO14782 793 aa16.17■□□□□ 0.18
RPUSD4-203ENST00000526942 MAP2P11137 1827 aaKnown RBP16.16■□□□□ 0.18
RPUSD4-203ENST00000526942 PIGBQ92521 554 aa16.16■□□□□ 0.18
RPUSD4-203ENST00000526942 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
RPUSD4-203ENST00000526942 KIF20BQ96Q89 1820 aa16.15■□□□□ 0.18
RPUSD4-203ENST00000526942 NCAPD2Q15021 1401 aa16.15■□□□□ 0.18
RPUSD4-203ENST00000526942 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.17
RPUSD4-203ENST00000526942 SIK1P57059 783 aa16.14■□□□□ 0.17
RPUSD4-203ENST00000526942 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
RPUSD4-203ENST00000526942 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
RPUSD4-203ENST00000526942 EMILIN1Q9Y6C2 1016 aa16.12■□□□□ 0.17
RPUSD4-203ENST00000526942 KIAA1551Q9HCM1 1747 aa16.11■□□□□ 0.17
RPUSD4-203ENST00000526942 GNPATO15228 680 aa16.11■□□□□ 0.17
RPUSD4-203ENST00000526942 TMF1P82094 1093 aa16.11■□□□□ 0.17
RPUSD4-203ENST00000526942 ITPK1Q13572 414 aa16.11■□□□□ 0.17
RPUSD4-203ENST00000526942 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
RPUSD4-203ENST00000526942 MMP10P09238 476 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms