RNA–Protein interactions for RNA: ENST00000526137.1

SIPA1-202, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-202ENST00000526137 NBPF4Q96M43 638 aa36.36■■■■□ 3.41
SIPA1-202ENST00000526137 TFCP2L1Q9NZI6 479 aa36.36■■■■□ 3.41
SIPA1-202ENST00000526137 KAT6BQ8WYB5 2073 aa36.35■■■■□ 3.41
SIPA1-202ENST00000526137 GGNBP2Q9H3C7 697 aa36.34■■■■□ 3.41
SIPA1-202ENST00000526137 NSD2O96028 1365 aa36.34■■■■□ 3.41
SIPA1-202ENST00000526137 MEGF6O75095 1541 aa36.32■■■■□ 3.4
SIPA1-202ENST00000526137 RTL1A6NKG5 1358 aa36.3■■■■□ 3.4
SIPA1-202ENST00000526137 POLD1P28340 1107 aa36.3■■■■□ 3.4
SIPA1-202ENST00000526137 TMF1P82094 1093 aa36.3■■■■□ 3.4
SIPA1-202ENST00000526137 USHBP1Q8N6Y0 703 aa36.3■■■■□ 3.4
SIPA1-202ENST00000526137 FAM208AQ9UK61 1670 aaKnown RBP36.28■■■■□ 3.4
SIPA1-202ENST00000526137 CCNL1Q9UK58 526 aaPredicted RBP36.27■■■■□ 3.4
SIPA1-202ENST00000526137 CGNL1Q0VF96 1302 aa36.27■■■■□ 3.4
SIPA1-202ENST00000526137 GPR162Q16538 588 aa36.26■■■■□ 3.4
SIPA1-202ENST00000526137 KLHL34Q8N239 644 aa36.25■■■■□ 3.39
SIPA1-202ENST00000526137 RAPGEF4Q8WZA2 1011 aa36.25■■■■□ 3.39
SIPA1-202ENST00000526137 HSP90AB2PQ58FF8 381 aa36.24■■■■□ 3.39
SIPA1-202ENST00000526137 USP47Q96K76 1375 aa36.23■■■■□ 3.39
SIPA1-202ENST00000526137 TATP17735 454 aaPredicted RBP36.2■■■■□ 3.39
SIPA1-202ENST00000526137 SMG6Q86US8 1419 aaKnown RBP36.18■■■■□ 3.38
SIPA1-202ENST00000526137 INSRP06213 1382 aa36.18■■■■□ 3.38
SIPA1-202ENST00000526137 COL23A1Q86Y22 540 aaPredicted RBP36.18■■■■□ 3.38
SIPA1-202ENST00000526137 NLGN2Q8NFZ4 835 aa36.17■■■■□ 3.38
SIPA1-202ENST00000526137 CDCA8Q53HL2 280 aa36.16■■■■□ 3.38
SIPA1-202ENST00000526137 MSH5O43196 834 aa36.15■■■■□ 3.38
SIPA1-202ENST00000526137 CARD14Q9BXL6 1004 aa36.15■■■■□ 3.38
SIPA1-202ENST00000526137 GOLGB1Q14789 3259 aaKnown RBP36.15■■■■□ 3.38
SIPA1-202ENST00000526137 DOT1LQ8TEK3 1739 aa36.14■■■■□ 3.38
SIPA1-202ENST00000526137 PELP1Q8IZL8 1130 aaKnown RBP36.14■■■■□ 3.38
SIPA1-202ENST00000526137 RGPD2P0DJD1 1756 aa36.13■■■■□ 3.37
SIPA1-202ENST00000526137 FLT4P35916 1363 aa36.13■■■■□ 3.37
SIPA1-202ENST00000526137 PCDH11XQ9BZA7 1347 aa36.12■■■■□ 3.37
SIPA1-202ENST00000526137 PCDH11YQ9BZA8 1340 aa36.12■■■■□ 3.37
SIPA1-202ENST00000526137 SHANK3Q9BYB0 1731 aa36.12■■■■□ 3.37
SIPA1-202ENST00000526137 CYP27B1O15528 508 aa36.11■■■■□ 3.37
SIPA1-202ENST00000526137 KIF24Q5T7B8 1368 aa36.11■■■■□ 3.37
SIPA1-202ENST00000526137 QSER1Q2KHR3 1735 aa36.11■■■■□ 3.37
SIPA1-202ENST00000526137 LY75O60449 1722 aa36.09■■■■□ 3.37
SIPA1-202ENST00000526137 MPRIPQ6WCQ1 1025 aa36.09■■■■□ 3.37
SIPA1-202ENST00000526137 EMILIN1Q9Y6C2 1016 aa36.09■■■■□ 3.37
SIPA1-202ENST00000526137 MSL1Q68DK7 614 aa36.07■■■■□ 3.36
SIPA1-202ENST00000526137 C1QTNF8P60827 252 aa36.06■■■■□ 3.36
SIPA1-202ENST00000526137 COL24A1Q17RW2 1714 aa36.05■■■■□ 3.36
SIPA1-202ENST00000526137 PALLDQ8WX93 1383 aa36.05■■■■□ 3.36
SIPA1-202ENST00000526137 HMGB2P26583 209 aaKnown RBP36.03■■■■□ 3.36
SIPA1-202ENST00000526137 TUBGCP6Q96RT7 1819 aa36.02■■■■□ 3.36
SIPA1-202ENST00000526137 YBX3P16989 372 aaKnown RBP eCLIP36.02■■■■□ 3.36
SIPA1-202ENST00000526137 CHD4Q14839 1912 aa36.01■■■■□ 3.36
SIPA1-202ENST00000526137 TRIM26Q12899 539 aaPredicted RBP36.01■■■■□ 3.36
SIPA1-202ENST00000526137 FLAD1Q8NFF5 587 aa36.01■■■■□ 3.36
SIPA1-202ENST00000526137 NSD3Q9BZ95 1437 aa36■■■■□ 3.35
SIPA1-202ENST00000526137 PPM1GO15355 546 aaPredicted RBP36■■■■□ 3.35
SIPA1-202ENST00000526137 SMARCC1Q92922 1105 aaPredicted RBP36■■■■□ 3.35
SIPA1-202ENST00000526137 PIGBQ92521 554 aa35.99■■■■□ 3.35
SIPA1-202ENST00000526137 GRIN3BO60391 1043 aa35.98■■■■□ 3.35
SIPA1-202ENST00000526137 NKX1-1Q15270 411 aaPredicted RBP35.97■■■■□ 3.35
SIPA1-202ENST00000526137 SENP3-EIF4A1A0A087X0R7 540 aa35.96■■■■□ 3.35
SIPA1-202ENST00000526137 WASHC2AQ641Q2 1341 aa35.95■■■■□ 3.35
SIPA1-202ENST00000526137 AMIGO3Q86WK7 504 aa35.94■■■■□ 3.34
SIPA1-202ENST00000526137 SPG7Q9UQ90 795 aa35.94■■■■□ 3.34
SIPA1-202ENST00000526137 CD2APQ9Y5K6 639 aa35.94■■■■□ 3.34
SIPA1-202ENST00000526137 NCAPD2Q15021 1401 aa35.93■■■■□ 3.34
SIPA1-202ENST00000526137 EYA1Q99502 592 aa35.93■■■■□ 3.34
SIPA1-202ENST00000526137 AK7Q96M32 723 aa35.92■■■■□ 3.34
SIPA1-202ENST00000526137 GIGYF1O75420 1035 aaPredicted RBP35.9■■■■□ 3.34
SIPA1-202ENST00000526137 SMIM5Q71RC9 77 aa35.9■■■■□ 3.34
SIPA1-202ENST00000526137 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.89■■■■□ 3.34
SIPA1-202ENST00000526137 POLKQ9UBT6 870 aa35.89■■■■□ 3.34
SIPA1-202ENST00000526137 KIF20BQ96Q89 1820 aa35.87■■■■□ 3.33
SIPA1-202ENST00000526137 TIMELESSQ9UNS1 1208 aa35.87■■■■□ 3.33
SIPA1-202ENST00000526137 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.86■■■■□ 3.33
SIPA1-202ENST00000526137 LOC102724428A0A0B4J2F2 783 aa35.86■■■■□ 3.33
SIPA1-202ENST00000526137 PHF14O94880 888 aa35.86■■■■□ 3.33
SIPA1-202ENST00000526137 SIK1P57059 783 aa35.86■■■■□ 3.33
SIPA1-202ENST00000526137 C5P01031 1676 aa35.85■■■■□ 3.33
SIPA1-202ENST00000526137 LINC00116Q8NCU8 138 aa35.84■■■■□ 3.33
SIPA1-202ENST00000526137 TMOD3Q9NYL9 352 aa35.83■■■■□ 3.33
SIPA1-202ENST00000526137 ASAP1Q9ULH1 1129 aa35.83■■■■□ 3.33
SIPA1-202ENST00000526137 TOGARAM1Q9Y4F4 1720 aa35.81■■■■□ 3.32
SIPA1-202ENST00000526137 PHKG2P15735 406 aa35.81■■■■□ 3.32
SIPA1-202ENST00000526137 IFNL2Q8IZJ0 200 aa35.81■■■■□ 3.32
SIPA1-202ENST00000526137 SSFA2P28290 1259 aa35.8■■■■□ 3.32
SIPA1-202ENST00000526137 ITPK1Q13572 414 aa35.79■■■■□ 3.32
SIPA1-202ENST00000526137 EIF4A2Q14240 407 aaKnown RBP35.79■■■■□ 3.32
SIPA1-202ENST00000526137 C4BP0C0L5 1744 aa35.79■■■■□ 3.32
SIPA1-202ENST00000526137 PKD1L3Q7Z443 1732 aa35.78■■■■□ 3.32
SIPA1-202ENST00000526137 TNNT2P45379 298 aaPredicted RBP35.78■■■■□ 3.32
SIPA1-202ENST00000526137 POLR3GLQ9BT43 218 aa35.78■■■■□ 3.32
SIPA1-202ENST00000526137 ATG3Q9NT62 314 aa35.76■■■■□ 3.32
SIPA1-202ENST00000526137 ATP6V1AP38606 617 aa35.75■■■■□ 3.31
SIPA1-202ENST00000526137 TAF1LQ8IZX4 1826 aa35.74■■■■□ 3.31
SIPA1-202ENST00000526137 GNPATO15228 680 aa35.74■■■■□ 3.31
SIPA1-202ENST00000526137 ITGB4P16144 1822 aa35.72■■■■□ 3.31
SIPA1-202ENST00000526137 ATP10DQ9P241 1426 aa35.72■■■■□ 3.31
SIPA1-202ENST00000526137 IGSF1Q8N6C5 1336 aa35.71■■■■□ 3.31
SIPA1-202ENST00000526137 WWC3Q9ULE0 1092 aa35.7■■■■□ 3.31
SIPA1-202ENST00000526137 ANKRD26Q9UPS8 1709 aa35.69■■■■□ 3.3
SIPA1-202ENST00000526137 MAP2P11137 1827 aaKnown RBP35.67■■■■□ 3.3
SIPA1-202ENST00000526137 CEP350Q5VT06 3117 aa35.66■■■■□ 3.3
SIPA1-202ENST00000526137 CLSPNQ9HAW4 1339 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms