RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 RGPD4Q7Z3J3 1758 aa23.89■■□□□ 1.42
NR1H3-228ENST00000525441 PSDA5PKW4 1024 aaPredicted RBP23.89■■□□□ 1.41
NR1H3-228ENST00000525441 KCNQ2O43526 872 aa23.89■■□□□ 1.41
NR1H3-228ENST00000525441 RREB1Q92766 1687 aa23.89■■□□□ 1.41
NR1H3-228ENST00000525441 NHSQ6T4R5 1651 aa23.88■■□□□ 1.41
NR1H3-228ENST00000525441 PER1O15534 1290 aaPredicted RBP23.87■■□□□ 1.41
NR1H3-228ENST00000525441 R3HDM1Q15032 1099 aaKnown RBP23.87■■□□□ 1.41
NR1H3-228ENST00000525441 EYA1Q99502 592 aa23.87■■□□□ 1.41
NR1H3-228ENST00000525441 NCAPD2Q15021 1401 aa23.86■■□□□ 1.41
NR1H3-228ENST00000525441 EIF4A2Q14240 407 aaKnown RBP23.86■■□□□ 1.41
NR1H3-228ENST00000525441 PCDH11XQ9BZA7 1347 aa23.85■■□□□ 1.41
NR1H3-228ENST00000525441 PCDH11YQ9BZA8 1340 aa23.85■■□□□ 1.41
NR1H3-228ENST00000525441 KAT6BQ8WYB5 2073 aa23.85■■□□□ 1.41
NR1H3-228ENST00000525441 NUP188Q5SRE5 1749 aa23.84■■□□□ 1.41
NR1H3-228ENST00000525441 TXNRD1Q16881 649 aa23.82■■□□□ 1.4
NR1H3-228ENST00000525441 CC2D1BQ5T0F9 858 aaKnown RBP23.82■■□□□ 1.4
NR1H3-228ENST00000525441 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
NR1H3-228ENST00000525441 NPC1L1Q9UHC9 1359 aa23.81■■□□□ 1.4
NR1H3-228ENST00000525441 SYTL4Q96C24 671 aaPredicted RBP23.81■■□□□ 1.4
NR1H3-228ENST00000525441 SPG7Q9UQ90 795 aa23.81■■□□□ 1.4
NR1H3-228ENST00000525441 PRIM1P49642 420 aaKnown RBP23.8■■□□□ 1.4
NR1H3-228ENST00000525441 PROM2Q8N271 834 aa23.8■■□□□ 1.4
NR1H3-228ENST00000525441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.79■■□□□ 1.4
NR1H3-228ENST00000525441 IGSF1Q8N6C5 1336 aa23.79■■□□□ 1.4
NR1H3-228ENST00000525441 PLEKHG2Q9H7P9 1386 aa23.78■■□□□ 1.4
NR1H3-228ENST00000525441 BTAF1O14981 1849 aa23.77■■□□□ 1.4
NR1H3-228ENST00000525441 CYP27B1O15528 508 aa23.76■■□□□ 1.39
NR1H3-228ENST00000525441 PKD1L3Q7Z443 1732 aa23.76■■□□□ 1.39
NR1H3-228ENST00000525441 DOT1LQ8TEK3 1739 aa23.76■■□□□ 1.39
NR1H3-228ENST00000525441 MTHFSP49914 203 aa23.75■■□□□ 1.39
NR1H3-228ENST00000525441 STK32BQ9NY57 414 aa23.74■■□□□ 1.39
NR1H3-228ENST00000525441 ANO8Q9HCE9 1232 aaPredicted RBP23.73■■□□□ 1.39
NR1H3-228ENST00000525441 CNGB1Q14028 1251 aaPredicted RBP23.72■■□□□ 1.39
NR1H3-228ENST00000525441 SLC27A3Q5K4L6 730 aa23.72■■□□□ 1.39
NR1H3-228ENST00000525441 LRP5O75197 1615 aa23.72■■□□□ 1.39
NR1H3-228ENST00000525441 IL13P35225 146 aa23.71■■□□□ 1.39
NR1H3-228ENST00000525441 NKX1-1Q15270 411 aaPredicted RBP23.71■■□□□ 1.39
NR1H3-228ENST00000525441 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
NR1H3-228ENST00000525441 PLEKHO1Q53GL0 409 aaPredicted RBP23.7■■□□□ 1.38
NR1H3-228ENST00000525441 SRCAPQ6ZRS2 3230 aa23.69■■□□□ 1.38
NR1H3-228ENST00000525441 PHKG2P15735 406 aa23.68■■□□□ 1.38
NR1H3-228ENST00000525441 SLC15A2Q16348 729 aa23.68■■□□□ 1.38
NR1H3-228ENST00000525441 AMOTQ4VCS5 1084 aa23.68■■□□□ 1.38
NR1H3-228ENST00000525441 SULT6B1Q6IMI4 303 aa23.68■■□□□ 1.38
NR1H3-228ENST00000525441 MPRIPQ6WCQ1 1025 aa23.67■■□□□ 1.38
NR1H3-228ENST00000525441 AEBP1Q8IUX7 1158 aa23.67■■□□□ 1.38
NR1H3-228ENST00000525441 DIAPH1O60610 1272 aaKnown RBP23.66■■□□□ 1.38
NR1H3-228ENST00000525441 LRRC4BQ9NT99 713 aa23.66■■□□□ 1.38
NR1H3-228ENST00000525441 KDRP35968 1356 aa23.65■■□□□ 1.38
NR1H3-228ENST00000525441 HSP90AB1P08238 724 aaKnown RBP23.65■■□□□ 1.38
NR1H3-228ENST00000525441 HMGB2P26583 209 aaKnown RBP23.65■■□□□ 1.38
NR1H3-228ENST00000525441 SMARCC1Q92922 1105 aaPredicted RBP23.64■■□□□ 1.37
NR1H3-228ENST00000525441 CCNL1Q9UK58 526 aaPredicted RBP23.64■■□□□ 1.37
NR1H3-228ENST00000525441 ZNF530Q6P9A1 599 aaPredicted RBP23.63■■□□□ 1.37
NR1H3-228ENST00000525441 SPON1Q9HCB6 807 aa23.63■■□□□ 1.37
NR1H3-228ENST00000525441 PAPPAQ13219 1627 aa23.62■■□□□ 1.37
NR1H3-228ENST00000525441 TMOD3Q9NYL9 352 aa23.62■■□□□ 1.37
NR1H3-228ENST00000525441 C1orf141Q5JVX7 400 aa23.61■■□□□ 1.37
NR1H3-228ENST00000525441 PIGBQ92521 554 aa23.61■■□□□ 1.37
NR1H3-228ENST00000525441 CFAP53Q96M91 514 aa23.61■■□□□ 1.37
NR1H3-228ENST00000525441 PALLDQ8WX93 1383 aa23.61■■□□□ 1.37
NR1H3-228ENST00000525441 LY75O60449 1722 aa23.61■■□□□ 1.37
NR1H3-228ENST00000525441 TOGARAM1Q9Y4F4 1720 aa23.61■■□□□ 1.37
NR1H3-228ENST00000525441 DCAF5Q96JK2 942 aa23.6■■□□□ 1.37
NR1H3-228ENST00000525441 ZNF827Q17R98 1081 aa23.59■■□□□ 1.37
NR1H3-228ENST00000525441 ITGB4P16144 1822 aa23.59■■□□□ 1.37
NR1H3-228ENST00000525441 ERVV-2B6SEH9 535 aa23.58■■□□□ 1.37
NR1H3-228ENST00000525441 HMOX1P09601 288 aa23.58■■□□□ 1.37
NR1H3-228ENST00000525441 KCNQ4P56696 695 aa23.58■■□□□ 1.37
NR1H3-228ENST00000525441 AKT1S1Q96B36 256 aa23.58■■□□□ 1.37
NR1H3-228ENST00000525441 CASZ1Q86V15 1759 aa23.57■■□□□ 1.36
NR1H3-228ENST00000525441 COL3A1P02461 1466 aaPredicted RBP23.56■■□□□ 1.36
NR1H3-228ENST00000525441 PDGFDQ9GZP0 370 aaPredicted RBP23.56■■□□□ 1.36
NR1H3-228ENST00000525441 U2SURPO15042 1029 aaKnown RBP23.55■■□□□ 1.36
NR1H3-228ENST00000525441 ZBTB7AO95365 584 aa23.55■■□□□ 1.36
NR1H3-228ENST00000525441 PPP2R1AP30153 589 aa23.55■■□□□ 1.36
NR1H3-228ENST00000525441 ZEB1P37275 1124 aaPredicted RBP23.55■■□□□ 1.36
NR1H3-228ENST00000525441 TFCP2L1Q9NZI6 479 aa23.55■■□□□ 1.36
NR1H3-228ENST00000525441 PPP1R1BQ9UD71 204 aaPredicted RBP23.55■■□□□ 1.36
NR1H3-228ENST00000525441 CABP4P57796 275 aa23.53■■□□□ 1.36
NR1H3-228ENST00000525441 AKAP4Q5JQC9 854 aa23.53■■□□□ 1.36
NR1H3-228ENST00000525441 MTFR1LQ9H019 292 aa23.53■■□□□ 1.36
NR1H3-228ENST00000525441 NUDCQ9Y266 331 aa23.53■■□□□ 1.36
NR1H3-228ENST00000525441 KDM6AO15550 1401 aaPredicted RBP23.51■■□□□ 1.35
NR1H3-228ENST00000525441 ASAP1Q9ULH1 1129 aa23.51■■□□□ 1.35
NR1H3-228ENST00000525441 ATF5Q9Y2D1 282 aaPredicted RBP23.51■■□□□ 1.35
NR1H3-228ENST00000525441 LOC102724428A0A0B4J2F2 783 aa23.5■■□□□ 1.35
NR1H3-228ENST00000525441 SIK1P57059 783 aa23.5■■□□□ 1.35
NR1H3-228ENST00000525441 SLC16A10Q8TF71 515 aa23.5■■□□□ 1.35
NR1H3-228ENST00000525441 ATG3Q9NT62 314 aa23.49■■□□□ 1.35
NR1H3-228ENST00000525441 PNPLA7Q6ZV29 1317 aa23.49■■□□□ 1.35
NR1H3-228ENST00000525441 QSER1Q2KHR3 1735 aa23.48■■□□□ 1.35
NR1H3-228ENST00000525441 MTHFSDQ2M296 383 aaKnown RBP23.47■■□□□ 1.35
NR1H3-228ENST00000525441 C5P01031 1676 aa23.47■■□□□ 1.35
NR1H3-228ENST00000525441 DDX10Q13206 875 aaKnown RBP23.46■■□□□ 1.35
NR1H3-228ENST00000525441 AK7Q96M32 723 aa23.46■■□□□ 1.35
NR1H3-228ENST00000525441 ATP6V1AP38606 617 aa23.45■■□□□ 1.34
NR1H3-228ENST00000525441 PTGER2P43116 358 aa23.45■■□□□ 1.34
NR1H3-228ENST00000525441 FLAD1Q8NFF5 587 aa23.45■■□□□ 1.34
NR1H3-228ENST00000525441 GAS2L2Q8NHY3 880 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms