RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 DDX17Q92841 729 aaKnown RBP19.48■□□□□ 0.71
BEST1-204ENST00000524926 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
BEST1-204ENST00000524926 ARHGEF25Q86VW2 580 aa19.47■□□□□ 0.71
BEST1-204ENST00000524926 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
BEST1-204ENST00000524926 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
BEST1-204ENST00000524926 DCCP43146 1447 aa19.47■□□□□ 0.71
BEST1-204ENST00000524926 CRB1P82279 1406 aa19.47■□□□□ 0.71
BEST1-204ENST00000524926 GNAT3A8MTJ3 354 aa19.46■□□□□ 0.71
BEST1-204ENST00000524926 PDE4AP27815 886 aa19.46■□□□□ 0.71
BEST1-204ENST00000524926 KRT24Q2M2I5 525 aa19.46■□□□□ 0.71
BEST1-204ENST00000524926 RGS3P49796 1198 aa19.46■□□□□ 0.71
BEST1-204ENST00000524926 MSH6P52701 1360 aa19.46■□□□□ 0.71
BEST1-204ENST00000524926 LMTK3Q96Q04 1460 aa19.46■□□□□ 0.71
BEST1-204ENST00000524926 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
BEST1-204ENST00000524926 HTATSF1O43719 755 aaKnown RBP19.45■□□□□ 0.7
BEST1-204ENST00000524926 HAP1P54257 671 aaPredicted RBP19.45■□□□□ 0.7
BEST1-204ENST00000524926 ARHGAP45Q92619 1136 aa19.45■□□□□ 0.7
BEST1-204ENST00000524926 TSPYL4Q9UJ04 414 aa19.45■□□□□ 0.7
BEST1-204ENST00000524926 RWDD1Q9H446 243 aaPredicted RBP19.44■□□□□ 0.7
BEST1-204ENST00000524926 USP19O94966 1318 aa19.44■□□□□ 0.7
BEST1-204ENST00000524926 SLIT3O75094 1523 aa19.44■□□□□ 0.7
BEST1-204ENST00000524926 LRRC59Q96AG4 307 aaKnown RBP19.44■□□□□ 0.7
BEST1-204ENST00000524926 BACH2Q9BYV9 841 aa19.43■□□□□ 0.7
BEST1-204ENST00000524926 KIAA0232Q92628 1395 aa19.42■□□□□ 0.7
BEST1-204ENST00000524926 ZC3H6P61129 1189 aaKnown RBP19.42■□□□□ 0.7
BEST1-204ENST00000524926 NPHP3Q7Z494 1330 aa19.42■□□□□ 0.7
BEST1-204ENST00000524926 MAP3K5Q99683 1374 aa19.41■□□□□ 0.7
BEST1-204ENST00000524926 ANKRD24Q8TF21 1146 aa19.41■□□□□ 0.7
BEST1-204ENST00000524926 PHRF1Q9P1Y6 1649 aaKnown RBP19.41■□□□□ 0.7
BEST1-204ENST00000524926 IL17REQ8NFR9 667 aa19.4■□□□□ 0.7
BEST1-204ENST00000524926 AXIN2Q9Y2T1 843 aa19.4■□□□□ 0.7
BEST1-204ENST00000524926 STRCQ7RTU9 1775 aa19.4■□□□□ 0.7
BEST1-204ENST00000524926 ZBTB40Q9NUA8 1239 aa19.4■□□□□ 0.7
BEST1-204ENST00000524926 API5Q9BZZ5 524 aaKnown RBP19.39■□□□□ 0.69
BEST1-204ENST00000524926 ZNF335Q9H4Z2 1342 aaPredicted RBP19.38■□□□□ 0.69
BEST1-204ENST00000524926 RGPD2P0DJD1 1756 aa19.38■□□□□ 0.69
BEST1-204ENST00000524926 ALS2Q96Q42 1657 aa19.37■□□□□ 0.69
BEST1-204ENST00000524926 TAF7Q15545 349 aaPredicted RBP19.36■□□□□ 0.69
BEST1-204ENST00000524926 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
BEST1-204ENST00000524926 CHMP4BQ9H444 224 aaKnown RBP19.36■□□□□ 0.69
BEST1-204ENST00000524926 ABCC4O15439 1325 aa19.36■□□□□ 0.69
BEST1-204ENST00000524926 ZBTB7BO15156 539 aaPredicted RBP19.35■□□□□ 0.69
BEST1-204ENST00000524926 PLEKHO1Q53GL0 409 aaPredicted RBP19.35■□□□□ 0.69
BEST1-204ENST00000524926 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
BEST1-204ENST00000524926 MED1Q15648 1581 aaPredicted RBP19.34■□□□□ 0.69
BEST1-204ENST00000524926 SLC4A2P04920 1241 aa19.34■□□□□ 0.69
BEST1-204ENST00000524926 ANP32AP39687 249 aaKnown RBP19.34■□□□□ 0.69
BEST1-204ENST00000524926 PDZRN3Q9UPQ7 1066 aa19.34■□□□□ 0.69
BEST1-204ENST00000524926 XIRP1Q702N8 1843 aaKnown RBP19.34■□□□□ 0.69
BEST1-204ENST00000524926 BRINP3Q76B58 766 aa19.34■□□□□ 0.69
BEST1-204ENST00000524926 FAM161AQ3B820 660 aa19.33■□□□□ 0.69
BEST1-204ENST00000524926 ZNF530Q6P9A1 599 aaPredicted RBP19.33■□□□□ 0.69
BEST1-204ENST00000524926 AMOTQ4VCS5 1084 aa19.33■□□□□ 0.68
BEST1-204ENST00000524926 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.68
BEST1-204ENST00000524926 LGR6Q9HBX8 967 aa19.33■□□□□ 0.68
BEST1-204ENST00000524926 TNS3Q68CZ2 1445 aa19.33■□□□□ 0.68
BEST1-204ENST00000524926 ERBB3P21860 1342 aa19.32■□□□□ 0.68
BEST1-204ENST00000524926 SPATA31A3Q5VYP0 1347 aa19.32■□□□□ 0.68
BEST1-204ENST00000524926 LRRC37A3O60309 1634 aa19.32■□□□□ 0.68
BEST1-204ENST00000524926 MSH5O43196 834 aa19.32■□□□□ 0.68
BEST1-204ENST00000524926 AKAP4Q5JQC9 854 aa19.32■□□□□ 0.68
BEST1-204ENST00000524926 BABAM1Q9NWV8 329 aa19.32■□□□□ 0.68
BEST1-204ENST00000524926 SLAIN2Q9P270 581 aa19.32■□□□□ 0.68
BEST1-204ENST00000524926 RGPD5Q99666 1765 aa19.31■□□□□ 0.68
BEST1-204ENST00000524926 C1orf141Q5JVX7 400 aa19.31■□□□□ 0.68
BEST1-204ENST00000524926 PXDNQ92626 1479 aa19.3■□□□□ 0.68
BEST1-204ENST00000524926 PTPRCP08575 1304 aa19.3■□□□□ 0.68
BEST1-204ENST00000524926 C1orf115Q9H7X2 142 aa19.3■□□□□ 0.68
BEST1-204ENST00000524926 STK31Q9BXU1 1019 aa19.3■□□□□ 0.68
BEST1-204ENST00000524926 NLRP2Q9NX02 1062 aa19.3■□□□□ 0.68
BEST1-204ENST00000524926 CEMIPQ8WUJ3 1361 aa19.29■□□□□ 0.68
BEST1-204ENST00000524926 CHRNA2Q15822 529 aa19.29■□□□□ 0.68
BEST1-204ENST00000524926 C8orf34Q49A92 452 aa19.29■□□□□ 0.68
BEST1-204ENST00000524926 MPRIPQ6WCQ1 1025 aa19.29■□□□□ 0.68
BEST1-204ENST00000524926 NECTIN2Q92692 538 aa19.29■□□□□ 0.68
BEST1-204ENST00000524926 NCAPD2Q15021 1401 aa19.28■□□□□ 0.68
BEST1-204ENST00000524926 CSB-PGBD3P0DP91 1061 aa19.28■□□□□ 0.68
BEST1-204ENST00000524926 TEFQ10587 303 aa19.27■□□□□ 0.68
BEST1-204ENST00000524926 CCDC30Q5VVM6 783 aa19.27■□□□□ 0.68
BEST1-204ENST00000524926 INTS3Q68E01 1043 aaKnown RBP19.27■□□□□ 0.68
BEST1-204ENST00000524926 G2E3Q7L622 706 aa19.27■□□□□ 0.68
BEST1-204ENST00000524926 SMC5Q8IY18 1101 aa19.26■□□□□ 0.67
BEST1-204ENST00000524926 RAPGEF4Q8WZA2 1011 aa19.26■□□□□ 0.67
BEST1-204ENST00000524926 RGS12O14924 1447 aa19.25■□□□□ 0.67
BEST1-204ENST00000524926 BTBD11A6QL63 1104 aa19.24■□□□□ 0.67
BEST1-204ENST00000524926 RNMTO43148 476 aaKnown RBP19.24■□□□□ 0.67
BEST1-204ENST00000524926 SOS1Q07889 1333 aaPredicted RBP19.24■□□□□ 0.67
BEST1-204ENST00000524926 SLC4A10Q6U841 1118 aa19.24■□□□□ 0.67
BEST1-204ENST00000524926 IPO9Q96P70 1041 aaKnown RBP19.23■□□□□ 0.67
BEST1-204ENST00000524926 LMO7Q8WWI1 1683 aa19.23■□□□□ 0.67
BEST1-204ENST00000524926 CAMTA1Q9Y6Y1 1673 aa19.23■□□□□ 0.67
BEST1-204ENST00000524926 F6X3S4 739 aa19.22■□□□□ 0.67
BEST1-204ENST00000524926 SOS2Q07890 1332 aaPredicted RBP19.22■□□□□ 0.67
BEST1-204ENST00000524926 TATP17735 454 aaPredicted RBP19.22■□□□□ 0.67
BEST1-204ENST00000524926 EIF4A1P60842 406 aaKnown RBP19.22■□□□□ 0.67
BEST1-204ENST00000524926 HDGFL1Q5TGJ6 251 aa19.22■□□□□ 0.67
BEST1-204ENST00000524926 KCNQ3O43525 872 aa19.21■□□□□ 0.67
BEST1-204ENST00000524926 FLIIQ13045 1269 aa19.21■□□□□ 0.67
BEST1-204ENST00000524926 FKBP5Q13451 457 aaPredicted RBP19.21■□□□□ 0.67
BEST1-204ENST00000524926 COL18A1P39060 1754 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 314.4 ms