RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 LY75O60449 1722 aa19.58■□□□□ 0.72
CSTF3-206ENST00000524827 HOXC9P31274 260 aa19.57■□□□□ 0.72
CSTF3-206ENST00000524827 TFCP2L1Q9NZI6 479 aa19.57■□□□□ 0.72
CSTF3-206ENST00000524827 RGPD2P0DJD1 1756 aa19.57■□□□□ 0.72
CSTF3-206ENST00000524827 MEGF6O75095 1541 aa19.56■□□□□ 0.72
CSTF3-206ENST00000524827 SENP3-EIF4A1A0A087X0R7 540 aa19.56■□□□□ 0.72
CSTF3-206ENST00000524827 C1QTNF8P60827 252 aa19.56■□□□□ 0.72
CSTF3-206ENST00000524827 COG3Q96JB2 828 aa19.56■□□□□ 0.72
CSTF3-206ENST00000524827 FBLN1P23142 703 aa19.54■□□□□ 0.72
CSTF3-206ENST00000524827 AMPHP49418 695 aa19.54■□□□□ 0.72
CSTF3-206ENST00000524827 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
CSTF3-206ENST00000524827 ZCRB1Q8TBF4 217 aaKnown RBP19.54■□□□□ 0.72
CSTF3-206ENST00000524827 TESK2Q96S53 571 aa19.54■□□□□ 0.72
CSTF3-206ENST00000524827 TONSLQ96HA7 1378 aa19.54■□□□□ 0.72
CSTF3-206ENST00000524827 NLGN2Q8NFZ4 835 aa19.53■□□□□ 0.72
CSTF3-206ENST00000524827 CCNL1Q9UK58 526 aaPredicted RBP19.52■□□□□ 0.72
CSTF3-206ENST00000524827 RTL1A6NKG5 1358 aa19.52■□□□□ 0.72
CSTF3-206ENST00000524827 ST20-MTHFSA0A0A6YYL1 179 aa19.5■□□□□ 0.71
CSTF3-206ENST00000524827 GOLGB1Q14789 3259 aaKnown RBP19.5■□□□□ 0.71
CSTF3-206ENST00000524827 USP47Q96K76 1375 aa19.49■□□□□ 0.71
CSTF3-206ENST00000524827 GIGYF1O75420 1035 aaPredicted RBP19.48■□□□□ 0.71
CSTF3-206ENST00000524827 RRS1Q15050 365 aaKnown RBP19.48■□□□□ 0.71
CSTF3-206ENST00000524827 NBPF6Q5VWK0 638 aa19.48■□□□□ 0.71
CSTF3-206ENST00000524827 USHBP1Q8N6Y0 703 aa19.48■□□□□ 0.71
CSTF3-206ENST00000524827 NBPF4Q96M43 638 aa19.48■□□□□ 0.71
CSTF3-206ENST00000524827 MSH5O43196 834 aa19.47■□□□□ 0.71
CSTF3-206ENST00000524827 COL23A1Q86Y22 540 aaPredicted RBP19.47■□□□□ 0.71
CSTF3-206ENST00000524827 SMG6Q86US8 1419 aaKnown RBP19.46■□□□□ 0.71
CSTF3-206ENST00000524827 YBX3P16989 372 aaKnown RBP eCLIP19.46■□□□□ 0.71
CSTF3-206ENST00000524827 CGNL1Q0VF96 1302 aa19.46■□□□□ 0.71
CSTF3-206ENST00000524827 C5P01031 1676 aa19.46■□□□□ 0.71
CSTF3-206ENST00000524827 MSL1Q68DK7 614 aa19.45■□□□□ 0.7
CSTF3-206ENST00000524827 RAPGEF4Q8WZA2 1011 aa19.45■□□□□ 0.7
CSTF3-206ENST00000524827 FYB1O15117 783 aa19.44■□□□□ 0.7
CSTF3-206ENST00000524827 GGNBP2Q9H3C7 697 aa19.44■□□□□ 0.7
CSTF3-206ENST00000524827 GRIN3BO60391 1043 aa19.43■□□□□ 0.7
CSTF3-206ENST00000524827 SLC24A1O60721 1099 aa19.43■□□□□ 0.7
CSTF3-206ENST00000524827 TATP17735 454 aaPredicted RBP19.42■□□□□ 0.7
CSTF3-206ENST00000524827 PCDH11XQ9BZA7 1347 aa19.42■□□□□ 0.7
CSTF3-206ENST00000524827 PCDH11YQ9BZA8 1340 aa19.42■□□□□ 0.7
CSTF3-206ENST00000524827 TAF1LQ8IZX4 1826 aa19.41■□□□□ 0.7
CSTF3-206ENST00000524827 INSRP06213 1382 aa19.41■□□□□ 0.7
CSTF3-206ENST00000524827 PALLDQ8WX93 1383 aa19.41■□□□□ 0.7
CSTF3-206ENST00000524827 KIF20BQ96Q89 1820 aa19.4■□□□□ 0.7
CSTF3-206ENST00000524827 HSP90AB2PQ58FF8 381 aa19.4■□□□□ 0.7
CSTF3-206ENST00000524827 TOGARAM1Q9Y4F4 1720 aa19.39■□□□□ 0.7
CSTF3-206ENST00000524827 FLT4P35916 1363 aa19.39■□□□□ 0.69
CSTF3-206ENST00000524827 FLAD1Q8NFF5 587 aa19.38■□□□□ 0.69
CSTF3-206ENST00000524827 C4BP0C0L5 1744 aa19.37■□□□□ 0.69
CSTF3-206ENST00000524827 ATP10DQ9P241 1426 aa19.37■□□□□ 0.69
CSTF3-206ENST00000524827 CYP27B1O15528 508 aa19.37■□□□□ 0.69
CSTF3-206ENST00000524827 TMF1P82094 1093 aa19.37■□□□□ 0.69
CSTF3-206ENST00000524827 MPRIPQ6WCQ1 1025 aa19.37■□□□□ 0.69
CSTF3-206ENST00000524827 CD2APQ9Y5K6 639 aa19.37■□□□□ 0.69
CSTF3-206ENST00000524827 ITGB4P16144 1822 aa19.37■□□□□ 0.69
CSTF3-206ENST00000524827 KIF24Q5T7B8 1368 aa19.36■□□□□ 0.69
CSTF3-206ENST00000524827 PKD1L3Q7Z443 1732 aa19.36■□□□□ 0.69
CSTF3-206ENST00000524827 HMGB2P26583 209 aaKnown RBP19.35■□□□□ 0.69
CSTF3-206ENST00000524827 AMIGO3Q86WK7 504 aa19.34■□□□□ 0.69
CSTF3-206ENST00000524827 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
CSTF3-206ENST00000524827 AK7Q96M32 723 aa19.34■□□□□ 0.69
CSTF3-206ENST00000524827 UBR3Q6ZT12 1888 aa19.33■□□□□ 0.69
CSTF3-206ENST00000524827 CEP350Q5VT06 3117 aa19.33■□□□□ 0.69
CSTF3-206ENST00000524827 NCAPD2Q15021 1401 aa19.33■□□□□ 0.68
CSTF3-206ENST00000524827 EMILIN1Q9Y6C2 1016 aa19.32■□□□□ 0.68
CSTF3-206ENST00000524827 ADCY9O60503 1353 aa19.32■□□□□ 0.68
CSTF3-206ENST00000524827 PIGBQ92521 554 aa19.31■□□□□ 0.68
CSTF3-206ENST00000524827 MAP2P11137 1827 aaKnown RBP19.3■□□□□ 0.68
CSTF3-206ENST00000524827 PHF14O94880 888 aa19.3■□□□□ 0.68
CSTF3-206ENST00000524827 SMIM5Q71RC9 77 aa19.3■□□□□ 0.68
CSTF3-206ENST00000524827 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
CSTF3-206ENST00000524827 ANKRD26Q9UPS8 1709 aa19.29■□□□□ 0.68
CSTF3-206ENST00000524827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.29■□□□□ 0.68
CSTF3-206ENST00000524827 CDCA8Q53HL2 280 aa19.29■□□□□ 0.68
CSTF3-206ENST00000524827 CARD14Q9BXL6 1004 aa19.29■□□□□ 0.68
CSTF3-206ENST00000524827 IGSF1Q8N6C5 1336 aa19.28■□□□□ 0.68
CSTF3-206ENST00000524827 NKX1-1Q15270 411 aaPredicted RBP19.28■□□□□ 0.68
CSTF3-206ENST00000524827 GPBP1L1Q9HC44 474 aaPredicted RBP19.28■□□□□ 0.68
CSTF3-206ENST00000524827 LINC00116Q8NCU8 138 aa19.27■□□□□ 0.68
CSTF3-206ENST00000524827 WWC3Q9ULE0 1092 aa19.27■□□□□ 0.68
CSTF3-206ENST00000524827 LOC102724428A0A0B4J2F2 783 aa19.26■□□□□ 0.67
CSTF3-206ENST00000524827 PPM1GO15355 546 aaPredicted RBP19.26■□□□□ 0.67
CSTF3-206ENST00000524827 SSFA2P28290 1259 aa19.26■□□□□ 0.67
CSTF3-206ENST00000524827 SIK1P57059 783 aa19.26■□□□□ 0.67
CSTF3-206ENST00000524827 ZNF526Q8TF50 670 aaPredicted RBP19.26■□□□□ 0.67
CSTF3-206ENST00000524827 SPG7Q9UQ90 795 aa19.26■□□□□ 0.67
CSTF3-206ENST00000524827 TMOD3Q9NYL9 352 aa19.24■□□□□ 0.67
CSTF3-206ENST00000524827 WASHC2AQ641Q2 1341 aa19.24■□□□□ 0.67
CSTF3-206ENST00000524827 ITPK1Q13572 414 aa19.23■□□□□ 0.67
CSTF3-206ENST00000524827 IFFO2Q5TF58 517 aa19.23■□□□□ 0.67
CSTF3-206ENST00000524827 EYA1Q99502 592 aa19.23■□□□□ 0.67
CSTF3-206ENST00000524827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.23■□□□□ 0.673e-7■■■□□ 17.3
CSTF3-206ENST00000524827 ASAP1Q9ULH1 1129 aa19.23■□□□□ 0.67
CSTF3-206ENST00000524827 GNPATO15228 680 aa19.22■□□□□ 0.67
CSTF3-206ENST00000524827 CICQ96RK0 1608 aaPredicted RBP19.21■□□□□ 0.67
CSTF3-206ENST00000524827 PHKG2P15735 406 aa19.2■□□□□ 0.66
CSTF3-206ENST00000524827 HSPA6P17066 643 aa19.2■□□□□ 0.66
CSTF3-206ENST00000524827 ATP6V1AP38606 617 aa19.2■□□□□ 0.66
CSTF3-206ENST00000524827 IFNL2Q8IZJ0 200 aa19.2■□□□□ 0.66
CSTF3-206ENST00000524827 PXDNLA1KZ92 1463 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms