RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 IFT57Q9NWB7 429 aa22.45■■□□□ 1.18
PCDHB18P-201ENST00000524813 USP26Q9BXU7 913 aa22.45■■□□□ 1.18
PCDHB18P-201ENST00000524813 TTC22Q5TAA0 569 aa22.44■■□□□ 1.18
PCDHB18P-201ENST00000524813 POLKQ9UBT6 870 aa22.44■■□□□ 1.18
PCDHB18P-201ENST00000524813 PKP1Q13835 747 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 TWISTNBQ3B726 338 aaPredicted RBP22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 SLIT1O75093 1534 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 API5Q9BZZ5 524 aaKnown RBP22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 PDCL3Q9H2J4 239 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 CABP1Q9NZU7 370 aa22.43■■□□□ 1.18
PCDHB18P-201ENST00000524813 ZNF853P0CG23 659 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 C16orf71Q8IYS4 520 aaPredicted RBP22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 WAPLQ7Z5K2 1190 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 RBSNQ9H1K0 784 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 DCTPP1Q9H773 170 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 ARHGAP23Q9P227 1491 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 ADAMTS13Q76LX8 1427 aa22.42■■□□□ 1.18
PCDHB18P-201ENST00000524813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 PLEKHG1Q9ULL1 1385 aa22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 C8orf58Q8NAV2 365 aa22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 CDK19Q9BWU1 502 aa22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 DLC1Q96QB1 1528 aa22.41■■□□□ 1.18
PCDHB18P-201ENST00000524813 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 HS1BP3Q53T59 392 aa22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 INTS3Q68E01 1043 aaKnown RBP22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 THEMISQ8N1K5 641 aaPredicted RBP22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 KNDC1Q76NI1 1749 aa22.4■■□□□ 1.18
PCDHB18P-201ENST00000524813 SLC26A8Q96RN1 970 aa22.39■■□□□ 1.18
PCDHB18P-201ENST00000524813 CWC22Q9HCG8 908 aaKnown RBP22.39■■□□□ 1.18
PCDHB18P-201ENST00000524813 PRPF40AO75400 957 aaKnown RBP22.38■■□□□ 1.17
PCDHB18P-201ENST00000524813 PRIM1P49642 420 aaKnown RBP22.38■■□□□ 1.17
PCDHB18P-201ENST00000524813 ZGPATQ8N5A5 531 aaKnown RBP22.38■■□□□ 1.17
PCDHB18P-201ENST00000524813 OTUD7AQ8TE49 926 aaPredicted RBP22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 PDLIM2Q96JY6 352 aa22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 RBM27Q9P2N5 1060 aaKnown RBP22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 NOL7Q9UMY1 257 aaKnown RBP22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 ZNF142P52746 1687 aaPredicted RBP22.37■■□□□ 1.17
PCDHB18P-201ENST00000524813 GPT2Q8TD30 523 aa22.36■■□□□ 1.17
PCDHB18P-201ENST00000524813 KIF24Q5T7B8 1368 aa22.36■■□□□ 1.17
PCDHB18P-201ENST00000524813 ST18O60284 1047 aa22.36■■□□□ 1.17
PCDHB18P-201ENST00000524813 TERF1P54274 439 aa22.36■■□□□ 1.17
PCDHB18P-201ENST00000524813 SDSP20132 328 aa22.35■■□□□ 1.17
PCDHB18P-201ENST00000524813 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.35■■□□□ 1.17
PCDHB18P-201ENST00000524813 ZDHHC9Q9Y397 364 aa22.35■■□□□ 1.17
PCDHB18P-201ENST00000524813 R3HCC1Q9Y3T6 440 aaKnown RBP22.35■■□□□ 1.17
PCDHB18P-201ENST00000524813 CPS1P31327 1500 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 IL13P35225 146 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 CASC1Q6TDU7 716 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 ANKRD44Q8N8A2 993 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 EMILIN1Q9Y6C2 1016 aa22.34■■□□□ 1.17
PCDHB18P-201ENST00000524813 ZNF500O60304 480 aaPredicted RBP22.33■■□□□ 1.17
PCDHB18P-201ENST00000524813 RBM10P98175 930 aaKnown RBP22.33■■□□□ 1.16
PCDHB18P-201ENST00000524813 FAM83GA6ND36 823 aa22.32■■□□□ 1.16
PCDHB18P-201ENST00000524813 LMOD3Q0VAK6 560 aa22.32■■□□□ 1.16
PCDHB18P-201ENST00000524813 SETD1BQ9UPS6 1966 aaKnown RBP22.32■■□□□ 1.16
PCDHB18P-201ENST00000524813 SMARCA5O60264 1052 aaPredicted RBP22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 CHAMP1Q96JM3 812 aa22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 TECPR2O15040 1411 aa22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 ATP10DQ9P241 1426 aa22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 APBB1O00213 710 aa22.31■■□□□ 1.16
PCDHB18P-201ENST00000524813 TMEM63CQ9P1W3 806 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 MAP2P11137 1827 aaKnown RBP22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 ROBO2Q9HCK4 1378 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 DCTN1Q14203 1278 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 CEP85Q6P2H3 762 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 LRSAM1Q6UWE0 723 aa22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 RPAP2Q8IXW5 612 aaPredicted RBP22.3■■□□□ 1.16
PCDHB18P-201ENST00000524813 REC8O95072 547 aa22.29■■□□□ 1.16
PCDHB18P-201ENST00000524813 PTPRUQ92729 1446 aa22.29■■□□□ 1.16
PCDHB18P-201ENST00000524813 SYCE3A1L190 88 aa22.28■■□□□ 1.16
PCDHB18P-201ENST00000524813 ZKSCAN5Q9Y2L8 839 aa22.28■■□□□ 1.16
PCDHB18P-201ENST00000524813 NSFL1CQ9UNZ2 370 aaKnown RBP22.28■■□□□ 1.16
PCDHB18P-201ENST00000524813 FOXD4L5Q5VV16 416 aaPredicted RBP22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 FOXD4L4Q8WXT5 416 aaPredicted RBP22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 ERC2O15083 957 aa22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 FAM13BQ9NYF5 915 aa22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 DIP2AQ14689 1571 aa22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 DLG5Q8TDM6 1919 aa22.26■■□□□ 1.15
PCDHB18P-201ENST00000524813 RGS12O14924 1447 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 ATP7BP35670 1465 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 UQCRHLA0A096LP55 91 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 UQCRHP07919 91 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 CDK12Q9NYV4 1490 aaPredicted RBP22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 RTL1A6NKG5 1358 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 MCM5P33992 734 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 NME9Q86XW9 330 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 CCDC39Q9UFE4 941 aa22.24■■□□□ 1.15
PCDHB18P-201ENST00000524813 MSH6P52701 1360 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 KRT24Q2M2I5 525 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 ZRANB1Q9UGI0 708 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 CSPP1Q1MSJ5 1256 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 TBX22Q9Y458 520 aa22.23■■□□□ 1.15
PCDHB18P-201ENST00000524813 CPSF1Q10570 1443 aaKnown RBP22.22■■□□□ 1.15
PCDHB18P-201ENST00000524813 MEIS3Q99687 375 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms