RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 RIMS2Q9UQ26 1411 aa10.09□□□□□ -0.79
CTR9-202ENST00000524523 ASXL1Q8IXJ9 1541 aa10.09□□□□□ -0.79
CTR9-202ENST00000524523 DLC1Q96QB1 1528 aa10.09□□□□□ -0.79
CTR9-202ENST00000524523 SMAPO00193 183 aa10.09□□□□□ -0.79
CTR9-202ENST00000524523 PDE3BQ13370 1112 aa10.09□□□□□ -0.79
CTR9-202ENST00000524523 FAM9BQ8IZU0 186 aa10.09□□□□□ -0.79
CTR9-202ENST00000524523 CLTCQ00610 1675 aaKnown RBP10.09□□□□□ -0.79
CTR9-202ENST00000524523 YTHDC2Q9H6S0 1430 aaKnown RBP10.08□□□□□ -0.8
CTR9-202ENST00000524523 TMEM132EQ6IEE7 984 aa10.08□□□□□ -0.8
CTR9-202ENST00000524523 THSD4Q6ZMP0 1018 aa10.08□□□□□ -0.8
CTR9-202ENST00000524523 NSD2O96028 1365 aa10.08□□□□□ -0.8
CTR9-202ENST00000524523 ATAD2Q6PL18 1390 aa10.08□□□□□ -0.8
CTR9-202ENST00000524523 TMEM2Q9UHN6 1383 aa10.08□□□□□ -0.8
CTR9-202ENST00000524523 MLECQ14165 292 aa10.07□□□□□ -0.8
CTR9-202ENST00000524523 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
CTR9-202ENST00000524523 FAM135BQ49AJ0 1406 aa10.07□□□□□ -0.8
CTR9-202ENST00000524523 CFAP65Q6ZU64 1925 aaKnown RBP10.06□□□□□ -0.8
CTR9-202ENST00000524523 GNPATO15228 680 aa10.06□□□□□ -0.8
CTR9-202ENST00000524523 PTPN5P54829 565 aa10.06□□□□□ -0.8
CTR9-202ENST00000524523 THEMISQ8N1K5 641 aaPredicted RBP10.06□□□□□ -0.8
CTR9-202ENST00000524523 ANKRD36BQ8N2N9 1353 aa10.05□□□□□ -0.8
CTR9-202ENST00000524523 C3orf80F5H4A9 247 aa10.05□□□□□ -0.8
CTR9-202ENST00000524523 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.05□□□□□ -0.8
CTR9-202ENST00000524523 TECPR2O15040 1411 aa10.05□□□□□ -0.8
CTR9-202ENST00000524523 CGNL1Q0VF96 1302 aa10.05□□□□□ -0.8
CTR9-202ENST00000524523 PTPRMP28827 1452 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 PLEKHG1Q9ULL1 1385 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 NEFLP07196 543 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 PPP2R1AP30153 589 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 RBM46Q8TBY0 533 aaKnown RBP10.04□□□□□ -0.8
CTR9-202ENST00000524523 LRCH3Q96II8 777 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 CARD14Q9BXL6 1004 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.04□□□□□ -0.8
CTR9-202ENST00000524523 TERF2IPQ9NYB0 399 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 POGKQ9P215 609 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 EID1Q9Y6B2 187 aa10.04□□□□□ -0.8
CTR9-202ENST00000524523 GPR37O15354 613 aa10.03□□□□□ -0.8
CTR9-202ENST00000524523 CC2D1BQ5T0F9 858 aaKnown RBP10.03□□□□□ -0.8
CTR9-202ENST00000524523 TBX22Q9Y458 520 aa10.03□□□□□ -0.8
CTR9-202ENST00000524523 SMG6Q86US8 1419 aaKnown RBP10.02□□□□□ -0.81
CTR9-202ENST00000524523 BCAMP50895 628 aa10.02□□□□□ -0.81
CTR9-202ENST00000524523 PRAM1Q96QH2 718 aa10.02□□□□□ -0.81
CTR9-202ENST00000524523 EYA1Q99502 592 aa10.02□□□□□ -0.81
CTR9-202ENST00000524523 ADGRG1Q9Y653 693 aa10.02□□□□□ -0.81
CTR9-202ENST00000524523 MYOM1P52179 1685 aa10.02□□□□□ -0.81
CTR9-202ENST00000524523 SLIT1O75093 1534 aa10.02□□□□□ -0.81
CTR9-202ENST00000524523 POLR3AO14802 1390 aaPredicted RBP10.01□□□□□ -0.81
CTR9-202ENST00000524523 USP32Q8NFA0 1604 aa10.01□□□□□ -0.81
CTR9-202ENST00000524523 OATP04181 439 aa10.01□□□□□ -0.81
CTR9-202ENST00000524523 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
CTR9-202ENST00000524523 SAMD7Q7Z3H4 446 aa10.01□□□□□ -0.81
CTR9-202ENST00000524523 SLC12A5Q9H2X9 1139 aa10.01□□□□□ -0.81
CTR9-202ENST00000524523 MED14O60244 1454 aa10.01□□□□□ -0.81
CTR9-202ENST00000524523 ARHGAP23Q9P227 1491 aa10.01□□□□□ -0.81
CTR9-202ENST00000524523 QRICH2Q9H0J4 1663 aa10.01□□□□□ -0.81
CTR9-202ENST00000524523 ARHGEF28Q8N1W1 1705 aaKnown RBP10.01□□□□□ -0.81
CTR9-202ENST00000524523 PIK3R4Q99570 1358 aa10.01□□□□□ -0.81
CTR9-202ENST00000524523 NUTM2DQ5VT03 806 aaPredicted RBP10□□□□□ -0.81
CTR9-202ENST00000524523 BLMP54132 1417 aaPredicted RBP9.99□□□□□ -0.81
CTR9-202ENST00000524523 TULP4Q9NRJ4 1543 aa9.99□□□□□ -0.81
CTR9-202ENST00000524523 FECHP22830 423 aa9.99□□□□□ -0.81
CTR9-202ENST00000524523 SLC4A3P48751 1232 aa9.99□□□□□ -0.81
CTR9-202ENST00000524523 WDR43Q15061 677 aaKnown RBP eCLIP9.99□□□□□ -0.81
CTR9-202ENST00000524523 FAM161AQ3B820 660 aa9.99□□□□□ -0.81
CTR9-202ENST00000524523 HDGFL2Q7Z4V5 671 aaPredicted RBP9.99□□□□□ -0.81
CTR9-202ENST00000524523 STK26Q9P289 416 aa9.99□□□□□ -0.81
CTR9-202ENST00000524523 NUDCQ9Y266 331 aa9.99□□□□□ -0.81
CTR9-202ENST00000524523 SUPT16HQ9Y5B9 1047 aaKnown RBP9.99□□□□□ -0.81
CTR9-202ENST00000524523 SRPK2P78362 688 aaKnown RBP9.98□□□□□ -0.81
CTR9-202ENST00000524523 MORC1Q86VD1 984 aa9.98□□□□□ -0.81
CTR9-202ENST00000524523 TXNDC2Q86VQ3 553 aa9.98□□□□□ -0.81
CTR9-202ENST00000524523 CDK19Q9BWU1 502 aa9.98□□□□□ -0.81
CTR9-202ENST00000524523 TSR3Q9UJK0 312 aaKnown RBP9.98□□□□□ -0.81
CTR9-202ENST00000524523 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
CTR9-202ENST00000524523 RNF123Q5XPI4 1314 aa9.98□□□□□ -0.81
CTR9-202ENST00000524523 MYO5BQ9ULV0 1848 aa9.98□□□□□ -0.81
CTR9-202ENST00000524523 UBR1Q8IWV7 1749 aa9.97□□□□□ -0.81
CTR9-202ENST00000524523 WASLO00401 505 aaPredicted RBP9.97□□□□□ -0.81
CTR9-202ENST00000524523 DNAJB2P25686 324 aa9.97□□□□□ -0.81
CTR9-202ENST00000524523 NYAP1Q6ZVC0 841 aa9.97□□□□□ -0.81
CTR9-202ENST00000524523 METP08581 1390 aa9.97□□□□□ -0.81
CTR9-202ENST00000524523 ADAMTS13Q76LX8 1427 aa9.97□□□□□ -0.81
CTR9-202ENST00000524523 NSD3Q9BZ95 1437 aa9.97□□□□□ -0.81
CTR9-202ENST00000524523 ATP7BP35670 1465 aa9.97□□□□□ -0.81
CTR9-202ENST00000524523 PPP4CP60510 307 aa9.96□□□□□ -0.82
CTR9-202ENST00000524523 SWT1Q5T5J6 900 aaKnown RBP9.96□□□□□ -0.82
CTR9-202ENST00000524523 CFAP53Q96M91 514 aa9.96□□□□□ -0.82
CTR9-202ENST00000524523 WBP1LQ9NX94 342 aa9.96□□□□□ -0.82
CTR9-202ENST00000524523 ADAMTS8Q9UP79 889 aa9.96□□□□□ -0.82
CTR9-202ENST00000524523 CPS1P31327 1500 aa9.96□□□□□ -0.82
CTR9-202ENST00000524523 DIP2AQ14689 1571 aa9.96□□□□□ -0.82
CTR9-202ENST00000524523 SETD1AO15047 1707 aaKnown RBP9.96□□□□□ -0.82
CTR9-202ENST00000524523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.95□□□□□ -0.82
CTR9-202ENST00000524523 RCCD1A6NED2 376 aa9.95□□□□□ -0.82
CTR9-202ENST00000524523 RNF40O75150 1001 aa9.95□□□□□ -0.82
CTR9-202ENST00000524523 LTKP29376 864 aa9.95□□□□□ -0.82
CTR9-202ENST00000524523 SLF2Q8IX21 1173 aa9.95□□□□□ -0.82
CTR9-202ENST00000524523 PXYLP1Q8TE99 480 aa9.95□□□□□ -0.82
CTR9-202ENST00000524523 NECTIN2Q92692 538 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms