RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	ANKRD36B	Q8N2N9	1353 aa		15.49	■□□□□ 0.07
SORBS3-222	ENST00000524057	TOMM70	O94826	608 aa		15.49	■□□□□ 0.07
SORBS3-222	ENST00000524057	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	15.49	■□□□□ 0.07
SORBS3-222	ENST00000524057	SIN3A	Q96ST3	1273 aa		15.49	■□□□□ 0.07
SORBS3-222	ENST00000524057	NSD2	O96028	1365 aa		15.49	■□□□□ 0.07
SORBS3-222	ENST00000524057	USP31	Q70CQ4	1352 aa		15.48	■□□□□ 0.07
SORBS3-222	ENST00000524057	KTN1	Q86UP2	1357 aa	Known RBP	15.48	■□□□□ 0.07
SORBS3-222	ENST00000524057	IGSF1	Q8N6C5	1336 aa		15.47	■□□□□ 0.07
SORBS3-222	ENST00000524057	LY75	O60449	1722 aa		15.46	■□□□□ 0.07
SORBS3-222	ENST00000524057	NME9	Q86XW9	330 aa		15.46	■□□□□ 0.07
SORBS3-222	ENST00000524057	FLAD1	Q8NFF5	587 aa		15.45	■□□□□ 0.06
SORBS3-222	ENST00000524057	PRELP	P51888	382 aa		15.44	■□□□□ 0.06
SORBS3-222	ENST00000524057	ZCRB1	Q8TBF4	217 aa	Known RBP	15.44	■□□□□ 0.06
SORBS3-222	ENST00000524057	LTV1	Q96GA3	475 aa	Predicted RBP	15.44	■□□□□ 0.06
SORBS3-222	ENST00000524057	HTRA3	P83110	453 aa		15.43	■□□□□ 0.06
SORBS3-222	ENST00000524057	TNS4	Q8IZW8	715 aa		15.43	■□□□□ 0.06
SORBS3-222	ENST00000524057	JMY	Q8N9B5	988 aa		15.43	■□□□□ 0.06
SORBS3-222	ENST00000524057	IP6K1	Q92551	441 aa		15.43	■□□□□ 0.06
SORBS3-222	ENST00000524057	KLRG1	Q96E93	195 aa		15.43	■□□□□ 0.06
SORBS3-222	ENST00000524057	USP47	Q96K76	1375 aa		15.43	■□□□□ 0.06
SORBS3-222	ENST00000524057	AMIGO3	Q86WK7	504 aa		15.41	■□□□□ 0.06
SORBS3-222	ENST00000524057	PCGF6	Q9BYE7	350 aa		15.41	■□□□□ 0.06
SORBS3-222	ENST00000524057	NMRK2	Q9NPI5	230 aa		15.41	■□□□□ 0.06
SORBS3-222	ENST00000524057	SMIM5	Q71RC9	77 aa		15.4	■□□□□ 0.06
SORBS3-222	ENST00000524057	L3MBTL2	Q969R5	705 aa		15.4	■□□□□ 0.06
SORBS3-222	ENST00000524057	LTN1	O94822	1766 aa		15.39	■□□□□ 0.05
SORBS3-222	ENST00000524057	SBNO2	Q9Y2G9	1366 aa		15.39	■□□□□ 0.05
SORBS3-222	ENST00000524057	DOT1L	Q8TEK3	1739 aa		15.38	■□□□□ 0.05
SORBS3-222	ENST00000524057	HMGB2	P26583	209 aa	Known RBP	15.38	■□□□□ 0.05
SORBS3-222	ENST00000524057	RBM46	Q8TBY0	533 aa	Known RBP	15.38	■□□□□ 0.05
SORBS3-222	ENST00000524057	PCNT	O95613	3336 aa		15.37	■□□□□ 0.05
SORBS3-222	ENST00000524057	NEUROD1	Q13562	356 aa		15.36	■□□□□ 0.05
SORBS3-222	ENST00000524057	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	15.35	■□□□□ 0.05
SORBS3-222	ENST00000524057	PHF14	O94880	888 aa		15.35	■□□□□ 0.05
SORBS3-222	ENST00000524057	ARHGAP27	Q6ZUM4	889 aa		15.35	■□□□□ 0.05
SORBS3-222	ENST00000524057	AK7	Q96M32	723 aa		15.35	■□□□□ 0.05
SORBS3-222	ENST00000524057	USP54	Q70EL1	1684 aa		15.35	■□□□□ 0.05
SORBS3-222	ENST00000524057	WDR90	Q96KV7	1748 aa		15.34	■□□□□ 0.05
SORBS3-222	ENST00000524057	CD163L1	Q9NR16	1453 aa		15.34	■□□□□ 0.05
SORBS3-222	ENST00000524057	FBLN1	P23142	703 aa		15.34	■□□□□ 0.05
SORBS3-222	ENST00000524057	MPRIP	Q6WCQ1	1025 aa		15.34	■□□□□ 0.05
SORBS3-222	ENST00000524057	TMC1	Q8TDI8	760 aa		15.34	■□□□□ 0.05
SORBS3-222	ENST00000524057	SLC12A5	Q9H2X9	1139 aa		15.34	■□□□□ 0.05
SORBS3-222	ENST00000524057	C5	P01031	1676 aa		15.34	■□□□□ 0.05
SORBS3-222	ENST00000524057	PALLD	Q8WX93	1383 aa		15.34	■□□□□ 0.05
SORBS3-222	ENST00000524057	MON2	Q7Z3U7	1717 aa		15.34	■□□□□ 0.05
SORBS3-222	ENST00000524057	MEGF6	O75095	1541 aa		15.33	■□□□□ 0.05
SORBS3-222	ENST00000524057	HOXC9	P31274	260 aa		15.33	■□□□□ 0.04
SORBS3-222	ENST00000524057	FSTL1	Q12841	308 aa		15.33	■□□□□ 0.04
SORBS3-222	ENST00000524057	NBPF6	Q5VWK0	638 aa		15.33	■□□□□ 0.04
SORBS3-222	ENST00000524057	NBPF4	Q96M43	638 aa		15.33	■□□□□ 0.04
SORBS3-222	ENST00000524057	BCS1L	Q9Y276	419 aa		15.33	■□□□□ 0.04
SORBS3-222	ENST00000524057	CIC	Q96RK0	1608 aa	Predicted RBP	15.32	■□□□□ 0.04
SORBS3-222	ENST00000524057		A0A0G2JLW4	131 aa		15.32	■□□□□ 0.04
SORBS3-222	ENST00000524057	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	15.32	■□□□□ 0.04
SORBS3-222	ENST00000524057	C16orf71	Q8IYS4	520 aa	Predicted RBP	15.32	■□□□□ 0.04
SORBS3-222	ENST00000524057	AMPH	P49418	695 aa		15.31	■□□□□ 0.04
SORBS3-222	ENST00000524057	TGFB2	P61812	414 aa		15.31	■□□□□ 0.04
SORBS3-222	ENST00000524057	MAP3K19	Q56UN5	1328 aa		15.31	■□□□□ 0.04
SORBS3-222	ENST00000524057	SSFA2	P28290	1259 aa		15.3	■□□□□ 0.04
SORBS3-222	ENST00000524057	CGNL1	Q0VF96	1302 aa		15.3	■□□□□ 0.04
SORBS3-222	ENST00000524057	FAM208A	Q9UK61	1670 aa	Known RBP	15.3	■□□□□ 0.04
SORBS3-222	ENST00000524057	TAF1L	Q8IZX4	1826 aa		15.29	■□□□□ 0.04
SORBS3-222	ENST00000524057	C4B	P0C0L5	1744 aa		15.29	■□□□□ 0.04
SORBS3-222	ENST00000524057	MMP10	P09238	476 aa		15.29	■□□□□ 0.04
SORBS3-222	ENST00000524057	C9orf131	Q5VYM1	1079 aa		15.29	■□□□□ 0.04
SORBS3-222	ENST00000524057	USHBP1	Q8N6Y0	703 aa		15.29	■□□□□ 0.04
SORBS3-222	ENST00000524057	SMARCC1	Q92922	1105 aa	Predicted RBP	15.29	■□□□□ 0.04
SORBS3-222	ENST00000524057	PXDNL	A1KZ92	1463 aa		15.28	■□□□□ 0.04
SORBS3-222	ENST00000524057	EDC4	Q6P2E9	1401 aa	Known RBP	15.28	■□□□□ 0.04
SORBS3-222	ENST00000524057	LINC00116	Q8NCU8	138 aa		15.28	■□□□□ 0.04
SORBS3-222	ENST00000524057	RAPGEF4	Q8WZA2	1011 aa		15.28	■□□□□ 0.04
SORBS3-222	ENST00000524057	RRAGC	Q9HB90	399 aa		15.28	■□□□□ 0.04
SORBS3-222	ENST00000524057	TOGARAM1	Q9Y4F4	1720 aa		15.28	■□□□□ 0.04
SORBS3-222	ENST00000524057	FCHSD2	O94868	740 aa		15.27	■□□□□ 0.04
SORBS3-222	ENST00000524057	DPEP1	P16444	411 aa		15.27	■□□□□ 0.04
SORBS3-222	ENST00000524057	PIGB	Q92521	554 aa		15.27	■□□□□ 0.04
SORBS3-222	ENST00000524057	TERF2IP	Q9NYB0	399 aa		15.27	■□□□□ 0.04
SORBS3-222	ENST00000524057	RGPD2	P0DJD1	1756 aa		15.26	■□□□□ 0.03
SORBS3-222	ENST00000524057	ROCK2	O75116	1388 aa	Known RBP	15.26	■□□□□ 0.03
SORBS3-222	ENST00000524057	CYP27B1	O15528	508 aa		15.26	■□□□□ 0.03
SORBS3-222	ENST00000524057	TAT	P17735	454 aa	Predicted RBP	15.26	■□□□□ 0.03
SORBS3-222	ENST00000524057	NSD3	Q9BZ95	1437 aa		15.26	■□□□□ 0.03
SORBS3-222	ENST00000524057		A0A1W2PP64	1363 aa		15.25	■□□□□ 0.03
SORBS3-222	ENST00000524057	UBR3	Q6ZT12	1888 aa		15.25	■□□□□ 0.03
SORBS3-222	ENST00000524057	HSPA1A	P0DMV8	641 aa	Known RBP	15.25	■□□□□ 0.03
SORBS3-222	ENST00000524057	HSPA1B	P0DMV9	641 aa	Known RBP	15.25	■□□□□ 0.03
SORBS3-222	ENST00000524057	COG3	Q96JB2	828 aa		15.25	■□□□□ 0.03
SORBS3-222	ENST00000524057	KDM2B	Q8NHM5	1336 aa		15.24	■□□□□ 0.03
SORBS3-222	ENST00000524057	PCDH11X	Q9BZA7	1347 aa		15.24	■□□□□ 0.03
SORBS3-222	ENST00000524057	PCDH11Y	Q9BZA8	1340 aa		15.24	■□□□□ 0.03
SORBS3-222	ENST00000524057	LOC102724428	A0A0B4J2F2	783 aa		15.24	■□□□□ 0.03
SORBS3-222	ENST00000524057	GNPAT	O15228	680 aa		15.24	■□□□□ 0.03
SORBS3-222	ENST00000524057	SLC34A2	O95436	690 aa		15.24	■□□□□ 0.03
SORBS3-222	ENST00000524057	KCNA3	P22001	575 aa		15.24	■□□□□ 0.03
SORBS3-222	ENST00000524057	SIK1	P57059	783 aa		15.24	■□□□□ 0.03
SORBS3-222	ENST00000524057	ITPK1	Q13572	414 aa		15.23	■□□□□ 0.03
SORBS3-222	ENST00000524057	NLGN1	Q8N2Q7	840 aa		15.23	■□□□□ 0.03
SORBS3-222	ENST00000524057	SMC1B	Q8NDV3	1235 aa		15.23	■□□□□ 0.03
SORBS3-222	ENST00000524057	N4BP2	Q86UW6	1770 aa	Predicted RBP	15.23	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms