RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 NFAT5O94916 1531 aa8.54□□□□□ -1.04
FAM49B-228ENST00000523993 SF3B2Q13435 895 aaKnown RBP8.54□□□□□ -1.04
FAM49B-228ENST00000523993 NEUROD1Q13562 356 aa8.54□□□□□ -1.04
FAM49B-228ENST00000523993 NUTM2GQ5VZR2 741 aa8.54□□□□□ -1.04
FAM49B-228ENST00000523993 CRB1P82279 1406 aa8.54□□□□□ -1.04
FAM49B-228ENST00000523993 USP31Q70CQ4 1352 aa8.53□□□□□ -1.04
FAM49B-228ENST00000523993 NLRP6P59044 892 aa8.53□□□□□ -1.04
FAM49B-228ENST00000523993 DEFB132Q7Z7B7 95 aa8.53□□□□□ -1.04
FAM49B-228ENST00000523993 TCP11L2Q8N4U5 519 aa8.53□□□□□ -1.04
FAM49B-228ENST00000523993 ZNF579Q8NAF0 562 aaKnown RBP8.53□□□□□ -1.04
FAM49B-228ENST00000523993 LRRC37A3O60309 1634 aa8.53□□□□□ -1.04
FAM49B-228ENST00000523993 TTC21BQ7Z4L5 1316 aa8.53□□□□□ -1.04
FAM49B-228ENST00000523993 NUP188Q5SRE5 1749 aa8.52□□□□□ -1.05
FAM49B-228ENST00000523993 PARD3Q8TEW0 1356 aa8.52□□□□□ -1.05
FAM49B-228ENST00000523993 TONSLQ96HA7 1378 aa8.52□□□□□ -1.05
FAM49B-228ENST00000523993 C11orf95C9JLR9 678 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-228ENST00000523993 BAG6P46379 1132 aa8.52□□□□□ -1.05
FAM49B-228ENST00000523993 TRIM26Q12899 539 aaPredicted RBP8.52□□□□□ -1.05
FAM49B-228ENST00000523993 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
FAM49B-228ENST00000523993 FAM196AQ6ZSG2 479 aa8.52□□□□□ -1.05
FAM49B-228ENST00000523993 ARHGEF25Q86VW2 580 aa8.52□□□□□ -1.05
FAM49B-228ENST00000523993 KCNH5Q8NCM2 988 aa8.52□□□□□ -1.05
FAM49B-228ENST00000523993 BCL9O00512 1426 aa8.52□□□□□ -1.05
FAM49B-228ENST00000523993 EVA1CP58658 441 aa8.51□□□□□ -1.05
FAM49B-228ENST00000523993 CARD11Q9BXL7 1154 aa8.51□□□□□ -1.05
FAM49B-228ENST00000523993 STRN4Q9NRL3 753 aa8.51□□□□□ -1.05
FAM49B-228ENST00000523993 KTN1Q86UP2 1357 aaKnown RBP8.5□□□□□ -1.05
FAM49B-228ENST00000523993 NINLQ9Y2I6 1382 aa8.5□□□□□ -1.05
FAM49B-228ENST00000523993 FAM208AQ9UK61 1670 aaKnown RBP8.5□□□□□ -1.05
FAM49B-228ENST00000523993 A0A0G2JS52 829 aa8.5□□□□□ -1.05
FAM49B-228ENST00000523993 MYT1Q01538 1121 aa8.5□□□□□ -1.05
FAM49B-228ENST00000523993 TESK2Q96S53 571 aa8.5□□□□□ -1.05
FAM49B-228ENST00000523993 WDR17Q8IZU2 1322 aa8.5□□□□□ -1.05
FAM49B-228ENST00000523993 EDC4Q6P2E9 1401 aaKnown RBP8.49□□□□□ -1.05
FAM49B-228ENST00000523993 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
FAM49B-228ENST00000523993 CAMKK2Q96RR4 588 aa8.49□□□□□ -1.05
FAM49B-228ENST00000523993 CDCA7Q9BWT1 371 aaPredicted RBP8.49□□□□□ -1.05
FAM49B-228ENST00000523993 AXIN2Q9Y2T1 843 aa8.49□□□□□ -1.05
FAM49B-228ENST00000523993 OVOS2A0A0G2JMS6 1433 aa8.48□□□□□ -1.05
FAM49B-228ENST00000523993 OVOS2A0A0J9YW53 1432 aa8.48□□□□□ -1.05
FAM49B-228ENST00000523993 OVOS2Q6IE36 1432 aa8.48□□□□□ -1.05
FAM49B-228ENST00000523993 EN1Q05925 392 aaPredicted RBP8.48□□□□□ -1.05
FAM49B-228ENST00000523993 PDE3BQ13370 1112 aa8.48□□□□□ -1.05
FAM49B-228ENST00000523993 FAM182BQ5T319 152 aa8.48□□□□□ -1.05
FAM49B-228ENST00000523993 ZC3H15Q8WU90 426 aaKnown RBP8.48□□□□□ -1.05
FAM49B-228ENST00000523993 A0A1W2PP64 1363 aa8.48□□□□□ -1.05
FAM49B-228ENST00000523993 CARD10Q9BWT7 1032 aa8.47□□□□□ -1.05
FAM49B-228ENST00000523993 USP35Q9P2H5 1018 aa8.47□□□□□ -1.05
FAM49B-228ENST00000523993 CLSPNQ9HAW4 1339 aa8.47□□□□□ -1.05
FAM49B-228ENST00000523993 CCDC7Q96M83 1385 aa8.47□□□□□ -1.05
FAM49B-228ENST00000523993 TRIM37O94972 964 aa8.46□□□□□ -1.06
FAM49B-228ENST00000523993 SLC12A5Q9H2X9 1139 aa8.46□□□□□ -1.06
FAM49B-228ENST00000523993 TERF2IPQ9NYB0 399 aa8.46□□□□□ -1.06
FAM49B-228ENST00000523993 NHSQ6T4R5 1651 aa8.46□□□□□ -1.06
FAM49B-228ENST00000523993 KIF20BQ96Q89 1820 aa8.45□□□□□ -1.06
FAM49B-228ENST00000523993 ST20-MTHFSA0A0A6YYL1 179 aa8.45□□□□□ -1.06
FAM49B-228ENST00000523993 PLSCR1O15162 318 aa8.45□□□□□ -1.06
FAM49B-228ENST00000523993 EZH2Q15910 746 aaKnown RBP8.45□□□□□ -1.06
FAM49B-228ENST00000523993 DDB1Q16531 1140 aa8.45□□□□□ -1.06
FAM49B-228ENST00000523993 TOM1L2Q6ZVM7 507 aa8.45□□□□□ -1.06
FAM49B-228ENST00000523993 HDGFL2Q7Z4V5 671 aaPredicted RBP8.45□□□□□ -1.06
FAM49B-228ENST00000523993 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
FAM49B-228ENST00000523993 MYOM1P52179 1685 aa8.45□□□□□ -1.06
FAM49B-228ENST00000523993 KAT6BQ8WYB5 2073 aa8.45□□□□□ -1.06
FAM49B-228ENST00000523993 ERBB3P21860 1342 aa8.45□□□□□ -1.06
FAM49B-228ENST00000523993 RGPD2P0DJD1 1756 aa8.44□□□□□ -1.06
FAM49B-228ENST00000523993 APBA3O96018 575 aa8.44□□□□□ -1.06
FAM49B-228ENST00000523993 NME9Q86XW9 330 aa8.44□□□□□ -1.06
FAM49B-228ENST00000523993 ARHGEF1Q92888 912 aaKnown RBP8.44□□□□□ -1.06
FAM49B-228ENST00000523993 ANKRD36BQ8N2N9 1353 aa8.44□□□□□ -1.06
FAM49B-228ENST00000523993 TNS2Q63HR2 1409 aa8.44□□□□□ -1.06
FAM49B-228ENST00000523993 SHANK3Q9BYB0 1731 aa8.43□□□□□ -1.06
FAM49B-228ENST00000523993 CASZ1Q86V15 1759 aa8.43□□□□□ -1.06
FAM49B-228ENST00000523993 ZNF467Q7Z7K2 595 aaPredicted RBP8.43□□□□□ -1.06
FAM49B-228ENST00000523993 MARCH10Q8NA82 808 aaPredicted RBP8.43□□□□□ -1.06
FAM49B-228ENST00000523993 ANKRD26Q9UPS8 1709 aa8.43□□□□□ -1.06
FAM49B-228ENST00000523993 BTAF1O14981 1849 aa8.43□□□□□ -1.06
FAM49B-228ENST00000523993 POTEMA6NI47 508 aa8.42□□□□□ -1.06
FAM49B-228ENST00000523993 PDAP1Q13442 181 aaKnown RBP8.42□□□□□ -1.06
FAM49B-228ENST00000523993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.42□□□□□ -1.06
FAM49B-228ENST00000523993 TMC1Q8TDI8 760 aa8.42□□□□□ -1.06
FAM49B-228ENST00000523993 MFRPQ9BY79 579 aa8.42□□□□□ -1.06
FAM49B-228ENST00000523993 USP47Q96K76 1375 aa8.42□□□□□ -1.06
FAM49B-228ENST00000523993 QSER1Q2KHR3 1735 aa8.41□□□□□ -1.06
FAM49B-228ENST00000523993 PSDA5PKW4 1024 aaPredicted RBP8.41□□□□□ -1.06
FAM49B-228ENST00000523993 SEMA3EO15041 775 aa8.41□□□□□ -1.06
FAM49B-228ENST00000523993 GALR2O43603 387 aaPredicted RBP8.41□□□□□ -1.06
FAM49B-228ENST00000523993 R3HDM1Q15032 1099 aaKnown RBP8.41□□□□□ -1.06
FAM49B-228ENST00000523993 IP6K1Q92551 441 aa8.41□□□□□ -1.06
FAM49B-228ENST00000523993 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.06
FAM49B-228ENST00000523993 PAPPAQ13219 1627 aa8.4□□□□□ -1.06
FAM49B-228ENST00000523993 RTL1A6NKG5 1358 aa8.4□□□□□ -1.06
FAM49B-228ENST00000523993 ZBTB7CA1YPR0 619 aa8.4□□□□□ -1.06
FAM49B-228ENST00000523993 TESPA1A2RU30 521 aaPredicted RBP8.4□□□□□ -1.06
FAM49B-228ENST00000523993 EXOC5O00471 708 aa8.4□□□□□ -1.06
FAM49B-228ENST00000523993 TMF1P82094 1093 aa8.4□□□□□ -1.06
FAM49B-228ENST00000523993 OTUD5Q96G74 571 aa8.4□□□□□ -1.06
FAM49B-228ENST00000523993 LY75O60449 1722 aa8.4□□□□□ -1.07
FAM49B-228ENST00000523993 COL24A1Q17RW2 1714 aa8.4□□□□□ -1.07
FAM49B-228ENST00000523993 UTRNP46939 3433 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms