RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 NFAT5O94916 1531 aa14.31□□□□□ -0.12
NDRG1-228ENST00000523931 C16orf71Q8IYS4 520 aaPredicted RBP14.31□□□□□ -0.12
NDRG1-228ENST00000523931 RBM46Q8TBY0 533 aaKnown RBP14.31□□□□□ -0.12
NDRG1-228ENST00000523931 DDX54Q8TDD1 881 aaKnown RBP14.31□□□□□ -0.12
NDRG1-228ENST00000523931 NMRK2Q9NPI5 230 aa14.31□□□□□ -0.12
NDRG1-228ENST00000523931 ERBB3P21860 1342 aa14.31□□□□□ -0.12
NDRG1-228ENST00000523931 PRIM1P49642 420 aaKnown RBP14.3□□□□□ -0.12
NDRG1-228ENST00000523931 CICQ96RK0 1608 aaPredicted RBP14.29□□□□□ -0.12
NDRG1-228ENST00000523931 TTC21BQ7Z4L5 1316 aa14.28□□□□□ -0.12
NDRG1-228ENST00000523931 ANKRD36BQ8N2N9 1353 aa14.28□□□□□ -0.12
NDRG1-228ENST00000523931 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.12
NDRG1-228ENST00000523931 CENPJQ9HC77 1338 aaPredicted RBP14.27□□□□□ -0.12
NDRG1-228ENST00000523931 FSTL1Q12841 308 aa14.27□□□□□ -0.13
NDRG1-228ENST00000523931 FLAD1Q8NFF5 587 aa14.27□□□□□ -0.13
NDRG1-228ENST00000523931 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
NDRG1-228ENST00000523931 NSD2O96028 1365 aa14.25□□□□□ -0.13
NDRG1-228ENST00000523931 USP47Q96K76 1375 aa14.25□□□□□ -0.13
NDRG1-228ENST00000523931 HSPA1AP0DMV8 641 aaKnown RBP14.25□□□□□ -0.13
NDRG1-228ENST00000523931 HSPA1BP0DMV9 641 aaKnown RBP14.25□□□□□ -0.13
NDRG1-228ENST00000523931 ANKRD24Q8TF21 1146 aa14.25□□□□□ -0.13
NDRG1-228ENST00000523931 C5P01031 1676 aa14.24□□□□□ -0.13
NDRG1-228ENST00000523931 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
NDRG1-228ENST00000523931 PCDH10Q9P2E7 1040 aa14.23□□□□□ -0.13
NDRG1-228ENST00000523931 LTN1O94822 1766 aa14.22□□□□□ -0.13
NDRG1-228ENST00000523931 HMGB2P26583 209 aaKnown RBP14.22□□□□□ -0.13
NDRG1-228ENST00000523931 KIAA1210Q9ULL0 1709 aa14.21□□□□□ -0.13
NDRG1-228ENST00000523931 USP54Q70EL1 1684 aa14.21□□□□□ -0.13
NDRG1-228ENST00000523931 ARHGAP27Q6ZUM4 889 aa14.21□□□□□ -0.13
NDRG1-228ENST00000523931 PCGF6Q9BYE7 350 aa14.21□□□□□ -0.13
NDRG1-228ENST00000523931 BCS1LQ9Y276 419 aa14.2□□□□□ -0.14
NDRG1-228ENST00000523931 NBPF1Q3BBV0 1214 aa14.19□□□□□ -0.14
NDRG1-228ENST00000523931 AK7Q96M32 723 aa14.19□□□□□ -0.14
NDRG1-228ENST00000523931 KTN1Q86UP2 1357 aaKnown RBP14.19□□□□□ -0.14
NDRG1-228ENST00000523931 PLEKHG2Q9H7P9 1386 aa14.19□□□□□ -0.14
NDRG1-228ENST00000523931 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
NDRG1-228ENST00000523931 KDM2BQ8NHM5 1336 aa14.18□□□□□ -0.14
NDRG1-228ENST00000523931 TAF1LQ8IZX4 1826 aa14.18□□□□□ -0.14
NDRG1-228ENST00000523931 PHF14O94880 888 aa14.18□□□□□ -0.14
NDRG1-228ENST00000523931 C9orf131Q5VYM1 1079 aa14.17□□□□□ -0.14
NDRG1-228ENST00000523931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.17□□□□□ -0.14
NDRG1-228ENST00000523931 SMC1BQ8NDV3 1235 aa14.17□□□□□ -0.14
NDRG1-228ENST00000523931 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
NDRG1-228ENST00000523931 PXDNLA1KZ92 1463 aa14.17□□□□□ -0.14
NDRG1-228ENST00000523931 NSD3Q9BZ95 1437 aa14.16□□□□□ -0.14
NDRG1-228ENST00000523931 KCPQ6ZWJ8 1503 aa14.16□□□□□ -0.14
NDRG1-228ENST00000523931 C4BP0C0L5 1744 aa14.16□□□□□ -0.14
NDRG1-228ENST00000523931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
NDRG1-228ENST00000523931 ZCRB1Q8TBF4 217 aaKnown RBP14.16□□□□□ -0.14
NDRG1-228ENST00000523931 FAM208AQ9UK61 1670 aaKnown RBP14.16□□□□□ -0.14
NDRG1-228ENST00000523931 USP31Q70CQ4 1352 aa14.15□□□□□ -0.14
NDRG1-228ENST00000523931 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
NDRG1-228ENST00000523931 AMIGO3Q86WK7 504 aa14.15□□□□□ -0.14
NDRG1-228ENST00000523931 TOGARAM1Q9Y4F4 1720 aa14.15□□□□□ -0.14
NDRG1-228ENST00000523931 C10orf71Q711Q0 1435 aa14.15□□□□□ -0.14
NDRG1-228ENST00000523931 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
NDRG1-228ENST00000523931 N4BP2Q86UW6 1770 aaPredicted RBP14.14□□□□□ -0.15
NDRG1-228ENST00000523931 SMIM5Q71RC9 77 aa14.14□□□□□ -0.15
NDRG1-228ENST00000523931 RRAGCQ9HB90 399 aa14.14□□□□□ -0.15
NDRG1-228ENST00000523931 TNRC6CQ9HCJ0 1690 aaKnown RBP14.14□□□□□ -0.15
NDRG1-228ENST00000523931 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
NDRG1-228ENST00000523931 A0A0G2JLW4 131 aa14.13□□□□□ -0.15
NDRG1-228ENST00000523931 FCHSD2O94868 740 aa14.13□□□□□ -0.15
NDRG1-228ENST00000523931 NME9Q86XW9 330 aa14.13□□□□□ -0.15
NDRG1-228ENST00000523931 MON2Q7Z3U7 1717 aa14.12□□□□□ -0.15
NDRG1-228ENST00000523931 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
NDRG1-228ENST00000523931 MMP10P09238 476 aa14.12□□□□□ -0.15
NDRG1-228ENST00000523931 TGFB2P61812 414 aa14.12□□□□□ -0.15
NDRG1-228ENST00000523931 KIF13BQ9NQT8 1826 aa14.12□□□□□ -0.15
NDRG1-228ENST00000523931 MEGF6O75095 1541 aa14.11□□□□□ -0.15
NDRG1-228ENST00000523931 SSFA2P28290 1259 aa14.11□□□□□ -0.15
NDRG1-228ENST00000523931 IP6K1Q92551 441 aa14.11□□□□□ -0.15
NDRG1-228ENST00000523931 FAM161AQ3B820 660 aa14.1□□□□□ -0.15
NDRG1-228ENST00000523931 RNF181Q9P0P0 153 aa14.1□□□□□ -0.15
NDRG1-228ENST00000523931 DPEP1P16444 411 aa14.09□□□□□ -0.15
NDRG1-228ENST00000523931 MPRIPQ6WCQ1 1025 aa14.09□□□□□ -0.15
NDRG1-228ENST00000523931 SMARCC1Q92922 1105 aaPredicted RBP14.09□□□□□ -0.15
NDRG1-228ENST00000523931 ARFGEF1Q9Y6D6 1849 aa14.07□□□□□ -0.16
NDRG1-228ENST00000523931 SIN3AQ96ST3 1273 aa14.07□□□□□ -0.16
NDRG1-228ENST00000523931 BRCA1P38398 1863 aaKnown RBP14.07□□□□□ -0.16
NDRG1-228ENST00000523931 SBNO2Q9Y2G9 1366 aa14.07□□□□□ -0.16
NDRG1-228ENST00000523931 RGPD2P0DJD1 1756 aa14.06□□□□□ -0.16
NDRG1-228ENST00000523931 GNPATO15228 680 aa14.06□□□□□ -0.16
NDRG1-228ENST00000523931 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
NDRG1-228ENST00000523931 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
NDRG1-228ENST00000523931 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
NDRG1-228ENST00000523931 CCDC87Q9NVE4 849 aa14.05□□□□□ -0.16
NDRG1-228ENST00000523931 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
NDRG1-228ENST00000523931 FOXN1O15353 648 aa14.04□□□□□ -0.16
NDRG1-228ENST00000523931 VEGFAP15692 232 aaPredicted RBP14.04□□□□□ -0.16
NDRG1-228ENST00000523931 LINC00116Q8NCU8 138 aa14.04□□□□□ -0.16
NDRG1-228ENST00000523931 AMPHP49418 695 aa14.03□□□□□ -0.16
NDRG1-228ENST00000523931 DCAF5Q96JK2 942 aa14.03□□□□□ -0.16
NDRG1-228ENST00000523931 PIM2Q9P1W9 311 aa14.03□□□□□ -0.16
NDRG1-228ENST00000523931 MKRN1Q9UHC7 482 aaKnown RBP14.03□□□□□ -0.16
NDRG1-228ENST00000523931 PCDH11XQ9BZA7 1347 aa14.03□□□□□ -0.16
NDRG1-228ENST00000523931 PCDH11YQ9BZA8 1340 aa14.03□□□□□ -0.16
NDRG1-228ENST00000523931 SBF1O95248 1867 aa14.02□□□□□ -0.16
NDRG1-228ENST00000523931 ITGB4P16144 1822 aa14.02□□□□□ -0.16
NDRG1-228ENST00000523931 LOC102724428A0A0B4J2F2 783 aa14.02□□□□□ -0.17
NDRG1-228ENST00000523931 HOXC9P31274 260 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms