RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 EMILIN1Q9Y6C2 1016 aa35.78■■■■□ 3.32
LAPTM4B-203ENST00000521545 PPM1GO15355 546 aaPredicted RBP35.77■■■■□ 3.32
LAPTM4B-203ENST00000521545 MEGF6O75095 1541 aa35.77■■■■□ 3.32
LAPTM4B-203ENST00000521545 TATP17735 454 aaPredicted RBP35.76■■■■□ 3.32
LAPTM4B-203ENST00000521545 SLC15A2Q16348 729 aa35.76■■■■□ 3.32
LAPTM4B-203ENST00000521545 PPP1R1BQ9UD71 204 aaPredicted RBP35.76■■■■□ 3.32
LAPTM4B-203ENST00000521545 SYTL4Q96C24 671 aaPredicted RBP35.75■■■■□ 3.31
LAPTM4B-203ENST00000521545 BTAF1O14981 1849 aa35.75■■■■□ 3.31
LAPTM4B-203ENST00000521545 PRIM1P49642 420 aaKnown RBP35.73■■■■□ 3.31
LAPTM4B-203ENST00000521545 PANK3Q9H999 370 aa35.69■■■■□ 3.3
LAPTM4B-203ENST00000521545 WASHC2AQ641Q2 1341 aa35.67■■■■□ 3.3
LAPTM4B-203ENST00000521545 PDGFDQ9GZP0 370 aaPredicted RBP35.67■■■■□ 3.3
LAPTM4B-203ENST00000521545 ZBTB7AO95365 584 aa35.66■■■■□ 3.3
LAPTM4B-203ENST00000521545 TNNT2P45379 298 aaPredicted RBP35.65■■■■□ 3.3
LAPTM4B-203ENST00000521545 SLC27A3Q5K4L6 730 aa35.65■■■■□ 3.3
LAPTM4B-203ENST00000521545 POLKQ9UBT6 870 aa35.65■■■■□ 3.3
LAPTM4B-203ENST00000521545 CASZ1Q86V15 1759 aa35.65■■■■□ 3.3
LAPTM4B-203ENST00000521545 SHANK3Q9BYB0 1731 aa35.65■■■■□ 3.3
LAPTM4B-203ENST00000521545 PCDH11XQ9BZA7 1347 aa35.64■■■■□ 3.3
LAPTM4B-203ENST00000521545 PCDH11YQ9BZA8 1340 aa35.64■■■■□ 3.3
LAPTM4B-203ENST00000521545 MAP2P11137 1827 aaKnown RBP35.64■■■■□ 3.3
LAPTM4B-203ENST00000521545 LRRC4BQ9NT99 713 aa35.63■■■■□ 3.29
LAPTM4B-203ENST00000521545 DOT1LQ8TEK3 1739 aa35.62■■■■□ 3.29
LAPTM4B-203ENST00000521545 ATF5Q9Y2D1 282 aaPredicted RBP35.6■■■■□ 3.29
LAPTM4B-203ENST00000521545 ANKRD26Q9UPS8 1709 aa35.59■■■■□ 3.29
LAPTM4B-203ENST00000521545 NSD2O96028 1365 aa35.57■■■■□ 3.28
LAPTM4B-203ENST00000521545 EYA1Q99502 592 aa35.57■■■■□ 3.28
LAPTM4B-203ENST00000521545 ZNF827Q17R98 1081 aa35.56■■■■□ 3.28
LAPTM4B-203ENST00000521545 MTFR1LQ9H019 292 aa35.56■■■■□ 3.28
LAPTM4B-203ENST00000521545 PAPPAQ13219 1627 aa35.56■■■■□ 3.28
LAPTM4B-203ENST00000521545 SPG7Q9UQ90 795 aa35.55■■■■□ 3.28
LAPTM4B-203ENST00000521545 CYP27B1O15528 508 aa35.53■■■■□ 3.28
LAPTM4B-203ENST00000521545 NCAPD2Q15021 1401 aa35.53■■■■□ 3.28
LAPTM4B-203ENST00000521545 KNSTRNQ9Y448 316 aa35.53■■■■□ 3.28
LAPTM4B-203ENST00000521545 PTGER2P43116 358 aa35.52■■■■□ 3.28
LAPTM4B-203ENST00000521545 AKT1S1Q96B36 256 aa35.52■■■■□ 3.28
LAPTM4B-203ENST00000521545 KCNQ4P56696 695 aa35.51■■■■□ 3.28
LAPTM4B-203ENST00000521545 MORC1Q86VD1 984 aa35.51■■■■□ 3.28
LAPTM4B-203ENST00000521545 CCNL1Q9UK58 526 aaPredicted RBP35.51■■■■□ 3.28
LAPTM4B-203ENST00000521545 DCAF8L1A6NGE4 600 aa35.5■■■■□ 3.27
LAPTM4B-203ENST00000521545 EIF4A2Q14240 407 aaKnown RBP35.5■■■■□ 3.27
LAPTM4B-203ENST00000521545 TFCP2L1Q9NZI6 479 aa35.49■■■■□ 3.27
LAPTM4B-203ENST00000521545 MPRIPQ6WCQ1 1025 aa35.48■■■■□ 3.27
LAPTM4B-203ENST00000521545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.48■■■■□ 3.27
LAPTM4B-203ENST00000521545 LY75O60449 1722 aa35.46■■■■□ 3.27
LAPTM4B-203ENST00000521545 PKD1L3Q7Z443 1732 aa35.45■■■■□ 3.27
LAPTM4B-203ENST00000521545 HMGB2P26583 209 aaKnown RBP35.44■■■■□ 3.26
LAPTM4B-203ENST00000521545 KIF7Q2M1P5 1343 aa35.43■■■■□ 3.26
LAPTM4B-203ENST00000521545 NKX1-1Q15270 411 aaPredicted RBP35.43■■■■□ 3.26
LAPTM4B-203ENST00000521545 SLC16A10Q8TF71 515 aa35.43■■■■□ 3.26
LAPTM4B-203ENST00000521545 IFNL2Q8IZJ0 200 aa35.4■■■■□ 3.26
LAPTM4B-203ENST00000521545 SMARCC1Q92922 1105 aaPredicted RBP35.4■■■■□ 3.26
LAPTM4B-203ENST00000521545 SGIP1Q9BQI5 828 aa35.4■■■■□ 3.26
LAPTM4B-203ENST00000521545 PNPLA7Q6ZV29 1317 aa35.39■■■■□ 3.26
LAPTM4B-203ENST00000521545 PALLDQ8WX93 1383 aa35.38■■■■□ 3.26
LAPTM4B-203ENST00000521545 ARXQ96QS3 562 aa35.38■■■■□ 3.25
LAPTM4B-203ENST00000521545 IGSF1Q8N6C5 1336 aa35.37■■■■□ 3.25
LAPTM4B-203ENST00000521545 QSER1Q2KHR3 1735 aa35.37■■■■□ 3.25
LAPTM4B-203ENST00000521545 PIGBQ92521 554 aa35.36■■■■□ 3.25
LAPTM4B-203ENST00000521545 FHDC1Q9C0D6 1143 aaPredicted RBP35.36■■■■□ 3.25
LAPTM4B-203ENST00000521545 PHKG2P15735 406 aa35.35■■■■□ 3.25
LAPTM4B-203ENST00000521545 SYT17Q9BSW7 474 aa35.34■■■■□ 3.25
LAPTM4B-203ENST00000521545 PLEKHG2Q9H7P9 1386 aa35.34■■■■□ 3.25
LAPTM4B-203ENST00000521545 ITGB4P16144 1822 aa35.34■■■■□ 3.25
LAPTM4B-203ENST00000521545 TOGARAM1Q9Y4F4 1720 aa35.33■■■■□ 3.25
LAPTM4B-203ENST00000521545 POLD1P28340 1107 aa35.33■■■■□ 3.25
LAPTM4B-203ENST00000521545 AMER1Q5JTC6 1135 aaPredicted RBP35.33■■■■□ 3.25
LAPTM4B-203ENST00000521545 TMOD3Q9NYL9 352 aa35.33■■■■□ 3.25
LAPTM4B-203ENST00000521545 MSH5O43196 834 aa35.32■■■■□ 3.24
LAPTM4B-203ENST00000521545 PLEKHO1Q53GL0 409 aaPredicted RBP35.31■■■■□ 3.24
LAPTM4B-203ENST00000521545 TUBGCP6Q96RT7 1819 aa35.28■■■■□ 3.24
LAPTM4B-203ENST00000521545 HSP90AB1P08238 724 aaKnown RBP35.26■■■■□ 3.24
LAPTM4B-203ENST00000521545 AMOTQ4VCS5 1084 aa35.26■■■■□ 3.24
LAPTM4B-203ENST00000521545 COL23A1Q86Y22 540 aaPredicted RBP35.26■■■■□ 3.24
LAPTM4B-203ENST00000521545 C5P01031 1676 aa35.26■■■■□ 3.23
LAPTM4B-203ENST00000521545 FLAD1Q8NFF5 587 aa35.25■■■■□ 3.23
LAPTM4B-203ENST00000521545 PER1O15534 1290 aaPredicted RBP35.24■■■■□ 3.23
LAPTM4B-203ENST00000521545 YY1P25490 414 aa35.23■■■■□ 3.23
LAPTM4B-203ENST00000521545 ZNF530Q6P9A1 599 aaPredicted RBP35.23■■■■□ 3.23
LAPTM4B-203ENST00000521545 LOC102724428A0A0B4J2F2 783 aa35.22■■■■□ 3.23
LAPTM4B-203ENST00000521545 SIK1P57059 783 aa35.22■■■■□ 3.23
LAPTM4B-203ENST00000521545 SULT6B1Q6IMI4 303 aa35.22■■■■□ 3.23
LAPTM4B-203ENST00000521545 DCAF5Q96JK2 942 aa35.22■■■■□ 3.23
LAPTM4B-203ENST00000521545 AK7Q96M32 723 aa35.22■■■■□ 3.23
LAPTM4B-203ENST00000521545 ASAP1Q9ULH1 1129 aa35.22■■■■□ 3.23
LAPTM4B-203ENST00000521545 ERVV-2B6SEH9 535 aa35.21■■■■□ 3.23
LAPTM4B-203ENST00000521545 IL13P35225 146 aa35.21■■■■□ 3.23
LAPTM4B-203ENST00000521545 AEBP1Q8IUX7 1158 aa35.21■■■■□ 3.23
LAPTM4B-203ENST00000521545 MAP3K5Q99683 1374 aa35.21■■■■□ 3.23
LAPTM4B-203ENST00000521545 MTHFSP49914 203 aa35.2■■■■□ 3.23
LAPTM4B-203ENST00000521545 CC2D1BQ5T0F9 858 aaKnown RBP35.2■■■■□ 3.23
LAPTM4B-203ENST00000521545 KLHL34Q8N239 644 aa35.2■■■■□ 3.23
LAPTM4B-203ENST00000521545 TAF1LQ8IZX4 1826 aa35.2■■■■□ 3.23
LAPTM4B-203ENST00000521545 C1orf141Q5JVX7 400 aa35.18■■■■□ 3.22
LAPTM4B-203ENST00000521545 ATG3Q9NT62 314 aa35.16■■■■□ 3.22
LAPTM4B-203ENST00000521545 C4BP0C0L5 1744 aa35.15■■■■□ 3.22
LAPTM4B-203ENST00000521545 COL24A1Q17RW2 1714 aa35.15■■■■□ 3.22
LAPTM4B-203ENST00000521545 ATP6V1AP38606 617 aa35.15■■■■□ 3.22
LAPTM4B-203ENST00000521545 CABP4P57796 275 aa35.14■■■■□ 3.22
LAPTM4B-203ENST00000521545 MSL1Q68DK7 614 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms