RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 KDRP35968 1356 aa16.78■□□□□ 0.28
HDAC2-211ENST00000521233 NUDCQ9Y266 331 aa16.78■□□□□ 0.28
HDAC2-211ENST00000521233 ANP32CO43423 234 aa16.76■□□□□ 0.27
HDAC2-211ENST00000521233 BCL9O00512 1426 aa16.76■□□□□ 0.27
HDAC2-211ENST00000521233 PCDH11XQ9BZA7 1347 aa16.75■□□□□ 0.27
HDAC2-211ENST00000521233 PCDH11YQ9BZA8 1340 aa16.75■□□□□ 0.27
HDAC2-211ENST00000521233 FAM196AQ6ZSG2 479 aa16.75■□□□□ 0.27
HDAC2-211ENST00000521233 ZCRB1Q8TBF4 217 aaKnown RBP16.75■□□□□ 0.27
HDAC2-211ENST00000521233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.75■□□□□ 0.275e-7■■■■□ 20
HDAC2-211ENST00000521233 SHANK3Q9BYB0 1731 aa16.75■□□□□ 0.27
HDAC2-211ENST00000521233 SPG7Q9UQ90 795 aa16.74■□□□□ 0.27
HDAC2-211ENST00000521233 SOCS7O14512 581 aa16.73■□□□□ 0.27
HDAC2-211ENST00000521233 U2SURPO15042 1029 aaKnown RBP16.73■□□□□ 0.27
HDAC2-211ENST00000521233 SULT6B1Q6IMI4 303 aa16.73■□□□□ 0.27
HDAC2-211ENST00000521233 AMOTQ4VCS5 1084 aa16.71■□□□□ 0.27
HDAC2-211ENST00000521233 AEBP1Q8IUX7 1158 aa16.71■□□□□ 0.27
HDAC2-211ENST00000521233 MARCH10Q8NA82 808 aaPredicted RBP16.71■□□□□ 0.27
HDAC2-211ENST00000521233 PLEKHO1Q53GL0 409 aaPredicted RBP16.7■□□□□ 0.26
HDAC2-211ENST00000521233 CCDC125Q86Z20 511 aa16.7■□□□□ 0.26
HDAC2-211ENST00000521233 HMOX1P09601 288 aa16.69■□□□□ 0.26
HDAC2-211ENST00000521233 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
HDAC2-211ENST00000521233 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
HDAC2-211ENST00000521233 DDX54Q8TDD1 881 aaKnown RBP16.69■□□□□ 0.26
HDAC2-211ENST00000521233 NHSQ6T4R5 1651 aa16.69■□□□□ 0.26
HDAC2-211ENST00000521233 EP400Q96L91 3159 aa16.68■□□□□ 0.26
HDAC2-211ENST00000521233 SF3B2Q13435 895 aaKnown RBP16.68■□□□□ 0.26
HDAC2-211ENST00000521233 FAM182BQ5T319 152 aa16.68■□□□□ 0.26
HDAC2-211ENST00000521233 TNS1Q9HBL0 1735 aaKnown RBP16.67■□□□□ 0.26
HDAC2-211ENST00000521233 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC2-211ENST00000521233 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
HDAC2-211ENST00000521233 SBF2Q86WG5 1849 aa16.66■□□□□ 0.26
HDAC2-211ENST00000521233 FCHSD2O94868 740 aa16.66■□□□□ 0.26
HDAC2-211ENST00000521233 ZNF530Q6P9A1 599 aaPredicted RBP16.66■□□□□ 0.26
HDAC2-211ENST00000521233 IFNL2Q8IZJ0 200 aa16.66■□□□□ 0.26
HDAC2-211ENST00000521233 CYP27B1O15528 508 aa16.65■□□□□ 0.26
HDAC2-211ENST00000521233 NEFMP07197 916 aa16.65■□□□□ 0.26
HDAC2-211ENST00000521233 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
HDAC2-211ENST00000521233 WDR43Q15061 677 aaKnown RBP eCLIP16.65■□□□□ 0.26
HDAC2-211ENST00000521233 C1orf141Q5JVX7 400 aa16.65■□□□□ 0.26
HDAC2-211ENST00000521233 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
HDAC2-211ENST00000521233 PNNQ9H307 717 aaKnown RBP16.65■□□□□ 0.26
HDAC2-211ENST00000521233 PHKG2P15735 406 aa16.64■□□□□ 0.25
HDAC2-211ENST00000521233 PRKAR2BP31323 418 aa16.64■□□□□ 0.25
HDAC2-211ENST00000521233 TRIM37O94972 964 aa16.63■□□□□ 0.25
HDAC2-211ENST00000521233 NKX1-1Q15270 411 aaPredicted RBP16.63■□□□□ 0.25
HDAC2-211ENST00000521233 GAS2L2Q8NHY3 880 aa16.63■□□□□ 0.25
HDAC2-211ENST00000521233 RGPD3A6NKT7 1758 aaPredicted RBP16.63■□□□□ 0.25
HDAC2-211ENST00000521233 RGPD4Q7Z3J3 1758 aa16.63■□□□□ 0.25
HDAC2-211ENST00000521233 BAG6P46379 1132 aa16.62■□□□□ 0.25
HDAC2-211ENST00000521233 BCL11BQ9C0K0 894 aaPredicted RBP16.62■□□□□ 0.25
HDAC2-211ENST00000521233 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
HDAC2-211ENST00000521233 DCAF5Q96JK2 942 aa16.61■□□□□ 0.25
HDAC2-211ENST00000521233 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
HDAC2-211ENST00000521233 TOGARAM1Q9Y4F4 1720 aa16.61■□□□□ 0.25
HDAC2-211ENST00000521233 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
HDAC2-211ENST00000521233 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
HDAC2-211ENST00000521233 MAP3K5Q99683 1374 aa16.59■□□□□ 0.25
HDAC2-211ENST00000521233 BTAF1O14981 1849 aa16.59■□□□□ 0.25
HDAC2-211ENST00000521233 MTHFSDQ2M296 383 aaKnown RBP16.58■□□□□ 0.24
HDAC2-211ENST00000521233 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.24
HDAC2-211ENST00000521233 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
HDAC2-211ENST00000521233 KDM6AO15550 1401 aaPredicted RBP16.58■□□□□ 0.24
HDAC2-211ENST00000521233 ADAMTS7Q9UKP4 1686 aa16.57■□□□□ 0.24
HDAC2-211ENST00000521233 MRC1P22897 1456 aa16.57■□□□□ 0.24
HDAC2-211ENST00000521233 APBA3O96018 575 aa16.57■□□□□ 0.24
HDAC2-211ENST00000521233 KAT6BQ8WYB5 2073 aa16.57■□□□□ 0.24
HDAC2-211ENST00000521233 SCN11AQ9UI33 1791 aa16.56■□□□□ 0.24
HDAC2-211ENST00000521233 ERVV-2B6SEH9 535 aa16.56■□□□□ 0.24
HDAC2-211ENST00000521233 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
HDAC2-211ENST00000521233 ITGB4P16144 1822 aa16.56■□□□□ 0.24
HDAC2-211ENST00000521233 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
HDAC2-211ENST00000521233 KCNQ2O43526 872 aa16.55■□□□□ 0.24
HDAC2-211ENST00000521233 PHACTR3Q96KR7 559 aa16.55■□□□□ 0.24
HDAC2-211ENST00000521233 TMOD3Q9NYL9 352 aa16.55■□□□□ 0.24
HDAC2-211ENST00000521233 RREB1Q92766 1687 aa16.54■□□□□ 0.24
HDAC2-211ENST00000521233 PLSCR1O15162 318 aa16.54■□□□□ 0.24
HDAC2-211ENST00000521233 PLEKHF1Q96S99 279 aa16.54■□□□□ 0.24
HDAC2-211ENST00000521233 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
HDAC2-211ENST00000521233 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
HDAC2-211ENST00000521233 ADAMTS8Q9UP79 889 aa16.53■□□□□ 0.24
HDAC2-211ENST00000521233 VIRMAQ69YN4 1812 aaKnown RBP16.52■□□□□ 0.24
HDAC2-211ENST00000521233 HTATSF1O43719 755 aaKnown RBP16.52■□□□□ 0.24
HDAC2-211ENST00000521233 CABP4P57796 275 aa16.52■□□□□ 0.24
HDAC2-211ENST00000521233 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
HDAC2-211ENST00000521233 DEFB132Q7Z7B7 95 aa16.52■□□□□ 0.24
HDAC2-211ENST00000521233 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.24
HDAC2-211ENST00000521233 SMARCC1Q92922 1105 aaPredicted RBP16.52■□□□□ 0.24
HDAC2-211ENST00000521233 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
HDAC2-211ENST00000521233 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
HDAC2-211ENST00000521233 EN1Q05925 392 aaPredicted RBP16.51■□□□□ 0.23
HDAC2-211ENST00000521233 LMOD3Q0VAK6 560 aa16.51■□□□□ 0.23
HDAC2-211ENST00000521233 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
HDAC2-211ENST00000521233 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
HDAC2-211ENST00000521233 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
HDAC2-211ENST00000521233 CAMKK2Q96RR4 588 aa16.51■□□□□ 0.23
HDAC2-211ENST00000521233 HMGB2P26583 209 aaKnown RBP16.5■□□□□ 0.23
HDAC2-211ENST00000521233 SLC52A2Q9HAB3 445 aa16.5■□□□□ 0.23
HDAC2-211ENST00000521233 LY75O60449 1722 aa16.5■□□□□ 0.23
HDAC2-211ENST00000521233 CEMIPQ8WUJ3 1361 aa16.5■□□□□ 0.23
HDAC2-211ENST00000521233 PALLDQ8WX93 1383 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms