RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 SOS2Q07890 1332 aaPredicted RBP10.78□□□□□ -0.68
PABPC1-216ENST00000520868 LILRA1O75019 489 aa10.77□□□□□ -0.69
PABPC1-216ENST00000520868 ADD1P35611 737 aaKnown RBP10.77□□□□□ -0.69
PABPC1-216ENST00000520868 RELBQ01201 579 aa10.77□□□□□ -0.69
PABPC1-216ENST00000520868 RNF20Q5VTR2 975 aa10.77□□□□□ -0.69
PABPC1-216ENST00000520868 MAN1A2O60476 641 aa10.76□□□□□ -0.69
PABPC1-216ENST00000520868 FIGNL2A6NMB9 653 aa10.75□□□□□ -0.69
PABPC1-216ENST00000520868 CYLDQ9NQC7 956 aa10.75□□□□□ -0.69
PABPC1-216ENST00000520868 FLIIQ13045 1269 aa10.74□□□□□ -0.69
PABPC1-216ENST00000520868 ZNF395Q9H8N7 513 aaPredicted RBP10.74□□□□□ -0.69
PABPC1-216ENST00000520868 ERBB4Q15303 1308 aa10.74□□□□□ -0.69
PABPC1-216ENST00000520868 H3BM21 787 aa10.73□□□□□ -0.69
PABPC1-216ENST00000520868 SPINT1O43278 529 aa10.73□□□□□ -0.69
PABPC1-216ENST00000520868 EIF4G2P78344 907 aaKnown RBP eCLIP10.73□□□□□ -0.69
PABPC1-216ENST00000520868 KDF1Q8NAX2 398 aaPredicted RBP10.73□□□□□ -0.69
PABPC1-216ENST00000520868 GDPD2Q9HCC8 539 aa10.73□□□□□ -0.69
PABPC1-216ENST00000520868 TTLL8A6PVC2 850 aa10.72□□□□□ -0.69
PABPC1-216ENST00000520868 CTSOP43234 321 aaPredicted RBP10.72□□□□□ -0.69
PABPC1-216ENST00000520868 WASHC4Q2M389 1173 aa10.72□□□□□ -0.69
PABPC1-216ENST00000520868 INSM2Q96T92 566 aaPredicted RBP10.72□□□□□ -0.69
PABPC1-216ENST00000520868 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
PABPC1-216ENST00000520868 ABL2P42684 1182 aa10.71□□□□□ -0.69
PABPC1-216ENST00000520868 IRF5Q13568 498 aa10.71□□□□□ -0.69
PABPC1-216ENST00000520868 ZNF608Q9ULD9 1512 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-216ENST00000520868 ADH1AP07327 375 aa10.7□□□□□ -0.7
PABPC1-216ENST00000520868 GMPRP36959 345 aa10.7□□□□□ -0.7
PABPC1-216ENST00000520868 SLC16A10Q8TF71 515 aa10.7□□□□□ -0.7
PABPC1-216ENST00000520868 WIPF1O43516 503 aa10.69□□□□□ -0.7
PABPC1-216ENST00000520868 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
PABPC1-216ENST00000520868 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
PABPC1-216ENST00000520868 RAD21O60216 631 aa10.67□□□□□ -0.7
PABPC1-216ENST00000520868 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
PABPC1-216ENST00000520868 NPAS3Q8IXF0 933 aa10.67□□□□□ -0.7
PABPC1-216ENST00000520868 POLMQ9NP87 494 aaPredicted RBP10.67□□□□□ -0.7
PABPC1-216ENST00000520868 SCTRP47872 440 aa10.66□□□□□ -0.7
PABPC1-216ENST00000520868 CEP126Q9P2H0 1117 aa10.66□□□□□ -0.7
PABPC1-216ENST00000520868 COG6Q9Y2V7 657 aa10.66□□□□□ -0.7
PABPC1-216ENST00000520868 TOPBP1Q92547 1522 aa10.65□□□□□ -0.7
PABPC1-216ENST00000520868 SOX11P35716 441 aa10.65□□□□□ -0.7
PABPC1-216ENST00000520868 PTGIRP43119 386 aa10.65□□□□□ -0.7
PABPC1-216ENST00000520868 PTSQ03393 145 aa10.65□□□□□ -0.7
PABPC1-216ENST00000520868 VAC14Q08AM6 782 aa10.65□□□□□ -0.7
PABPC1-216ENST00000520868 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.65□□□□□ -0.71e-19■□□□□ 9.7
PABPC1-216ENST00000520868 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
PABPC1-216ENST00000520868 IRF7Q92985 503 aa10.65□□□□□ -0.7
PABPC1-216ENST00000520868 UBTFP17480 764 aaKnown RBP10.64□□□□□ -0.71
PABPC1-216ENST00000520868 ERVK-9P63128 1117 aa10.64□□□□□ -0.71
PABPC1-216ENST00000520868 CC2D2BQ6DHV5 1058 aa10.64□□□□□ -0.71
PABPC1-216ENST00000520868 CYB5RLQ6IPT4 315 aa10.64□□□□□ -0.71
PABPC1-216ENST00000520868 RNF217Q8TC41 542 aa10.64□□□□□ -0.71
PABPC1-216ENST00000520868 ESF1Q9H501 851 aaKnown RBP10.64□□□□□ -0.71
PABPC1-216ENST00000520868 PCDHB11Q9Y5F2 797 aa10.64□□□□□ -0.71
PABPC1-216ENST00000520868 RIMBP3CA6NJZ7 1639 aa10.64□□□□□ -0.71
PABPC1-216ENST00000520868 RIMBP3BA6NNM3 1639 aa10.64□□□□□ -0.71
PABPC1-216ENST00000520868 RIMBP3Q9UFD9 1639 aa10.64□□□□□ -0.71
PABPC1-216ENST00000520868 AQRO60306 1485 aaKnown RBP eCLIP10.62□□□□□ -0.711e-6■■■■■ 32.8
PABPC1-216ENST00000520868 SLFNL1Q499Z3 407 aa10.62□□□□□ -0.71
PABPC1-216ENST00000520868 ABCC8Q09428 1581 aa10.61□□□□□ -0.71
PABPC1-216ENST00000520868 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
PABPC1-216ENST00000520868 SEMA3FQ13275 785 aa10.61□□□□□ -0.71
PABPC1-216ENST00000520868 TSGA10IPQ3SY00 556 aa10.61□□□□□ -0.71
PABPC1-216ENST00000520868 CCDC85AQ96PX6 553 aaPredicted RBP10.61□□□□□ -0.71
PABPC1-216ENST00000520868 CDCA7Q9BWT1 371 aaPredicted RBP10.61□□□□□ -0.71
PABPC1-216ENST00000520868 ARHGEF11O15085 1522 aa10.61□□□□□ -0.71
PABPC1-216ENST00000520868 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
PABPC1-216ENST00000520868 LORP23490 312 aaPredicted RBP10.6□□□□□ -0.71
PABPC1-216ENST00000520868 CYP2U1Q7Z449 544 aa10.6□□□□□ -0.71
PABPC1-216ENST00000520868 MYCP01106 439 aaPredicted RBP10.59□□□□□ -0.71
PABPC1-216ENST00000520868 VSIG8P0DPA2 414 aa10.59□□□□□ -0.71
PABPC1-216ENST00000520868 CCDC155Q8N6L0 562 aa10.59□□□□□ -0.71
PABPC1-216ENST00000520868 OSBPL3Q9H4L5 887 aa10.59□□□□□ -0.71
PABPC1-216ENST00000520868 DNMBPQ6XZF7 1577 aa10.58□□□□□ -0.72
PABPC1-216ENST00000520868 SENP3-EIF4A1A0A087X0R7 540 aa10.58□□□□□ -0.72
PABPC1-216ENST00000520868 SLC35F4A4IF30 521 aa10.58□□□□□ -0.72
PABPC1-216ENST00000520868 RNF135Q8IUD6 432 aa10.58□□□□□ -0.72
PABPC1-216ENST00000520868 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
PABPC1-216ENST00000520868 POM121Q96HA1 1249 aa10.58□□□□□ -0.72
PABPC1-216ENST00000520868 EIF4G3O43432 1585 aaKnown RBP10.57□□□□□ -0.72
PABPC1-216ENST00000520868 A0A1W2PRU2 124 aa10.57□□□□□ -0.72
PABPC1-216ENST00000520868 MEN1O00255 615 aa10.57□□□□□ -0.72
PABPC1-216ENST00000520868 PHTF2Q8N3S3 785 aa10.57□□□□□ -0.72
PABPC1-216ENST00000520868 RHOQP17081 205 aa10.56□□□□□ -0.72
PABPC1-216ENST00000520868 INSM1Q01101 510 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-216ENST00000520868 PRICKLE2Q7Z3G6 844 aa10.56□□□□□ -0.72
PABPC1-216ENST00000520868 DOLKQ9UPQ8 538 aa10.56□□□□□ -0.72
PABPC1-216ENST00000520868 RAD54L2Q9Y4B4 1467 aa10.55□□□□□ -0.72
PABPC1-216ENST00000520868 TDRD9Q8NDG6 1382 aaKnown RBP10.55□□□□□ -0.72
PABPC1-216ENST00000520868 TRAK2O60296 914 aa10.55□□□□□ -0.72
PABPC1-216ENST00000520868 SIRT1Q96EB6 747 aa10.55□□□□□ -0.72
PABPC1-216ENST00000520868 RAB6BQ9NRW1 208 aa10.55□□□□□ -0.72
PABPC1-216ENST00000520868 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
PABPC1-216ENST00000520868 RNF144AP50876 292 aaPredicted RBP10.54□□□□□ -0.72
PABPC1-216ENST00000520868 USP4Q13107 963 aa10.54□□□□□ -0.72
PABPC1-216ENST00000520868 MAP7D1Q3KQU3 841 aa10.54□□□□□ -0.72
PABPC1-216ENST00000520868 ARHGEF10LQ9HCE6 1279 aa10.54□□□□□ -0.72
PABPC1-216ENST00000520868 TARBP1Q13395 1621 aaKnown RBP10.54□□□□□ -0.72
PABPC1-216ENST00000520868 SOGA1O94964 1423 aa10.53□□□□□ -0.72
PABPC1-216ENST00000520868 STAU1O95793 577 aaKnown RBP10.53□□□□□ -0.72
PABPC1-216ENST00000520868 GPC1P35052 558 aa10.53□□□□□ -0.72
PABPC1-216ENST00000520868 LYSMD3Q7Z3D4 306 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms