RNA–Protein interactions for RNA: ENST00000520619.1

SNHG6-202, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 3 BASIC

Gene SNHG6, Length 479 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-202ENST00000520619 GLMNQ92990 594 aa8.13□□□□□ -1.11
SNHG6-202ENST00000520619 ESF1Q9H501 851 aaKnown RBP8.13□□□□□ -1.11
SNHG6-202ENST00000520619 SOS2Q07890 1332 aaPredicted RBP8.12□□□□□ -1.11
SNHG6-202ENST00000520619 MYCP01106 439 aaPredicted RBP8.12□□□□□ -1.11
SNHG6-202ENST00000520619 USP4Q13107 963 aa8.12□□□□□ -1.11
SNHG6-202ENST00000520619 OXLD1Q5BKU9 147 aa8.12□□□□□ -1.11
SNHG6-202ENST00000520619 NFATC2IPQ8NCF5 419 aa8.12□□□□□ -1.11
SNHG6-202ENST00000520619 UCN2Q96RP3 112 aa8.12□□□□□ -1.11
SNHG6-202ENST00000520619 TTLL8A6PVC2 850 aa8.11□□□□□ -1.11
SNHG6-202ENST00000520619 SOBPA7XYQ1 873 aa8.11□□□□□ -1.11
SNHG6-202ENST00000520619 SKIP12755 728 aa8.11□□□□□ -1.11
SNHG6-202ENST00000520619 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
SNHG6-202ENST00000520619 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
SNHG6-202ENST00000520619 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
SNHG6-202ENST00000520619 CTSOP43234 321 aaPredicted RBP8.1□□□□□ -1.11
SNHG6-202ENST00000520619 DNMT3LQ9UJW3 386 aa8.1□□□□□ -1.11
SNHG6-202ENST00000520619 ZNF777Q9ULD5 760 aaPredicted RBP8.1□□□□□ -1.11
SNHG6-202ENST00000520619 A0A1W2PRU2 124 aa8.09□□□□□ -1.11
SNHG6-202ENST00000520619 MAN1A2O60476 641 aa8.09□□□□□ -1.11
SNHG6-202ENST00000520619 TBC1D9Q6ZT07 1266 aa8.09□□□□□ -1.11
SNHG6-202ENST00000520619 SIRT1Q96EB6 747 aa8.09□□□□□ -1.11
SNHG6-202ENST00000520619 POLMQ9NP87 494 aaPredicted RBP8.09□□□□□ -1.11
SNHG6-202ENST00000520619 FIGNL2A6NMB9 653 aa8.08□□□□□ -1.12
SNHG6-202ENST00000520619 ZNF775Q96BV0 537 aaPredicted RBP8.08□□□□□ -1.12
SNHG6-202ENST00000520619 CALR3Q96L12 384 aaKnown RBP8.08□□□□□ -1.12
SNHG6-202ENST00000520619 ARHGEF10LQ9HCE6 1279 aa8.08□□□□□ -1.12
SNHG6-202ENST00000520619 USP17L5A8MUK1 530 aa8.07□□□□□ -1.12
SNHG6-202ENST00000520619 ATP9BO43861 1147 aa8.07□□□□□ -1.12
SNHG6-202ENST00000520619 LZTS3O60299 673 aaPredicted RBP8.07□□□□□ -1.12
SNHG6-202ENST00000520619 GNRH1P01148 92 aa8.07□□□□□ -1.12
SNHG6-202ENST00000520619 NCOA4Q13772 614 aa8.07□□□□□ -1.12
SNHG6-202ENST00000520619 EML3Q32P44 896 aa8.07□□□□□ -1.12
SNHG6-202ENST00000520619 DEPDC4Q8N2C3 294 aa8.07□□□□□ -1.12
SNHG6-202ENST00000520619 RNF217Q8TC41 542 aa8.07□□□□□ -1.12
SNHG6-202ENST00000520619 MEN1O00255 615 aa8.06□□□□□ -1.12
SNHG6-202ENST00000520619 CLN3Q13286 438 aa8.06□□□□□ -1.12
SNHG6-202ENST00000520619 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.129e-20■■□□□ 12.5
SNHG6-202ENST00000520619 FOXD4L5Q5VV16 416 aaPredicted RBP8.06□□□□□ -1.12
SNHG6-202ENST00000520619 RAB6BQ9NRW1 208 aa8.06□□□□□ -1.12
SNHG6-202ENST00000520619 RNF144AP50876 292 aaPredicted RBP8.05□□□□□ -1.12
SNHG6-202ENST00000520619 PLEKHM2Q8IWE5 1019 aa8.05□□□□□ -1.12
SNHG6-202ENST00000520619 TFIP11Q9UBB9 837 aaKnown RBP8.05□□□□□ -1.12
SNHG6-202ENST00000520619 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
SNHG6-202ENST00000520619 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
SNHG6-202ENST00000520619 STAU1O95793 577 aaKnown RBP8.04□□□□□ -1.12
SNHG6-202ENST00000520619 IL2RAP01589 272 aa8.04□□□□□ -1.12
SNHG6-202ENST00000520619 GPC1P35052 558 aa8.04□□□□□ -1.12
SNHG6-202ENST00000520619 USP17L2Q6R6M4 530 aa8.04□□□□□ -1.12
SNHG6-202ENST00000520619 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
SNHG6-202ENST00000520619 NLRP3Q96P20 1036 aa8.04□□□□□ -1.12
SNHG6-202ENST00000520619 NOD1Q9Y239 953 aa8.04□□□□□ -1.12
SNHG6-202ENST00000520619 PALM3A6NDB9 673 aaPredicted RBP8.03□□□□□ -1.12
SNHG6-202ENST00000520619 C14orf37Q86TY3 774 aa8.03□□□□□ -1.12
SNHG6-202ENST00000520619 CNKSR1Q969H4 720 aa8.03□□□□□ -1.12
SNHG6-202ENST00000520619 ESYT1Q9BSJ8 1104 aa8.03□□□□□ -1.12
SNHG6-202ENST00000520619 PPP1R12CQ9BZL4 782 aa8.03□□□□□ -1.12
SNHG6-202ENST00000520619 ETNK1Q9HBU6 452 aa8.03□□□□□ -1.12
SNHG6-202ENST00000520619 PCDHGA11Q9Y5H2 935 aa8.03□□□□□ -1.12
SNHG6-202ENST00000520619 SCNN1DP51172 638 aa8.02□□□□□ -1.13
SNHG6-202ENST00000520619 ESCO1Q5FWF5 840 aa8.02□□□□□ -1.13
SNHG6-202ENST00000520619 XAGE2Q96GT9 111 aa8.02□□□□□ -1.13
SNHG6-202ENST00000520619 NXF1Q9UBU9 619 aaKnown RBP8.02□□□□□ -1.13
SNHG6-202ENST00000520619 HRH3Q9Y5N1 445 aa8.02□□□□□ -1.13
SNHG6-202ENST00000520619 MAFBQ9Y5Q3 323 aaPredicted RBP8.02□□□□□ -1.13
SNHG6-202ENST00000520619 TERTO14746 1132 aaKnown RBP8.01□□□□□ -1.13
SNHG6-202ENST00000520619 GTF2IP78347 998 aa8.01□□□□□ -1.13
SNHG6-202ENST00000520619 PTSQ03393 145 aa8.01□□□□□ -1.13
SNHG6-202ENST00000520619 LYSMD3Q7Z3D4 306 aa8.01□□□□□ -1.13
SNHG6-202ENST00000520619 INHAP05111 366 aa8□□□□□ -1.13
SNHG6-202ENST00000520619 GDF10P55107 478 aa8□□□□□ -1.13
SNHG6-202ENST00000520619 CENPCQ03188 943 aa8□□□□□ -1.13
SNHG6-202ENST00000520619 SLC27A3Q5K4L6 730 aa8□□□□□ -1.13
SNHG6-202ENST00000520619 PRICKLE2Q7Z3G6 844 aa8□□□□□ -1.13
SNHG6-202ENST00000520619 GRIP2Q9C0E4 1043 aa8□□□□□ -1.13
SNHG6-202ENST00000520619 MKRN1Q9UHC7 482 aaKnown RBP8□□□□□ -1.13
SNHG6-202ENST00000520619 WASLO00401 505 aaPredicted RBP7.99□□□□□ -1.13
SNHG6-202ENST00000520619 VEGFBP49765 207 aa7.99□□□□□ -1.13
SNHG6-202ENST00000520619 NFX1Q12986 1120 aaKnown RBP7.99□□□□□ -1.13
SNHG6-202ENST00000520619 TRIM50Q86XT4 487 aa7.99□□□□□ -1.13
SNHG6-202ENST00000520619 NPAS3Q8IXF0 933 aa7.99□□□□□ -1.13
SNHG6-202ENST00000520619 SLC35F4A4IF30 521 aa7.98□□□□□ -1.13
SNHG6-202ENST00000520619 TMEM229AB2RXF0 380 aa7.98□□□□□ -1.13
SNHG6-202ENST00000520619 CLDN10P78369 228 aa7.98□□□□□ -1.13
SNHG6-202ENST00000520619 PSME1Q06323 249 aa7.98□□□□□ -1.13
SNHG6-202ENST00000520619 CFAP70Q5T0N1 1121 aa7.98□□□□□ -1.13
SNHG6-202ENST00000520619 FHDC1Q9C0D6 1143 aaPredicted RBP7.98□□□□□ -1.13
SNHG6-202ENST00000520619 SENP3-EIF4A1A0A087X0R7 540 aa7.97□□□□□ -1.13
SNHG6-202ENST00000520619 H3BM21 787 aa7.97□□□□□ -1.13
SNHG6-202ENST00000520619 ZBTB7BO15156 539 aaPredicted RBP7.97□□□□□ -1.13
SNHG6-202ENST00000520619 RHOQP17081 205 aa7.97□□□□□ -1.13
SNHG6-202ENST00000520619 LMOD1P29536 600 aaPredicted RBP7.97□□□□□ -1.13
SNHG6-202ENST00000520619 ATP1A2P50993 1020 aa7.97□□□□□ -1.13
SNHG6-202ENST00000520619 POU4F2Q12837 409 aa7.97□□□□□ -1.13
SNHG6-202ENST00000520619 TREML4Q6UXN2 200 aa7.97□□□□□ -1.13
SNHG6-202ENST00000520619 CCDC155Q8N6L0 562 aa7.97□□□□□ -1.13
SNHG6-202ENST00000520619 ZSCAN10Q96SZ4 725 aaPredicted RBP7.97□□□□□ -1.13
SNHG6-202ENST00000520619 KIAA1024Q9UPX6 916 aa7.97□□□□□ -1.13
SNHG6-202ENST00000520619 ARID3CA6NKF2 412 aa7.96□□□□□ -1.14
SNHG6-202ENST00000520619 SPATA31C2B4DYI2 1134 aa7.96□□□□□ -1.14
SNHG6-202ENST00000520619 PPFIA3O75145 1194 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms