RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.22
PCDHGB4-201ENST00000519479 ERC2O15083 957 aa13.71□□□□□ -0.22
PCDHGB4-201ENST00000519479 HSP90B1P14625 803 aaKnown RBP13.71□□□□□ -0.22
PCDHGB4-201ENST00000519479 HSPA2P54652 639 aa13.71□□□□□ -0.22
PCDHGB4-201ENST00000519479 SEC24BO95487 1268 aa13.7□□□□□ -0.22
PCDHGB4-201ENST00000519479 ZKSCAN1P17029 563 aaPredicted RBP13.7□□□□□ -0.22
PCDHGB4-201ENST00000519479 TRIM35Q9UPQ4 493 aa13.7□□□□□ -0.22
PCDHGB4-201ENST00000519479 SYNMO15061 1565 aa13.7□□□□□ -0.22
PCDHGB4-201ENST00000519479 HSP90AA2PQ14568 343 aaPredicted RBP13.7□□□□□ -0.22
PCDHGB4-201ENST00000519479 TRMT2AQ8IZ69 625 aaKnown RBP13.7□□□□□ -0.22
PCDHGB4-201ENST00000519479 CLASRPQ8N2M8 674 aaKnown RBP13.7□□□□□ -0.22
PCDHGB4-201ENST00000519479 XPCQ01831 940 aaPredicted RBP13.7□□□□□ -0.22
PCDHGB4-201ENST00000519479 MAP3K4Q9Y6R4 1608 aa13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 VAMP4O75379 141 aa13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 NUCB1Q02818 461 aa13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 RBM33Q96EV2 1170 aaKnown RBP13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 BMP2KLQ5H9B9 411 aa13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 USHBP1Q8N6Y0 703 aa13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 KIF1BO60333 1816 aa13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 MRPL50Q8N5N7 158 aaKnown RBP13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 EIF4A2Q14240 407 aaKnown RBP13.69□□□□□ -0.22
PCDHGB4-201ENST00000519479 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
PCDHGB4-201ENST00000519479 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
PCDHGB4-201ENST00000519479 CDK11BP21127 795 aaKnown RBP13.68□□□□□ -0.22
PCDHGB4-201ENST00000519479 MRE11P49959 708 aa13.68□□□□□ -0.22
PCDHGB4-201ENST00000519479 IL1RAPL2Q9NP60 686 aa13.68□□□□□ -0.22
PCDHGB4-201ENST00000519479 CSPP1Q1MSJ5 1256 aa13.68□□□□□ -0.22
PCDHGB4-201ENST00000519479 TOM1O60784 492 aa13.68□□□□□ -0.22
PCDHGB4-201ENST00000519479 PHF14O94880 888 aa13.68□□□□□ -0.22
PCDHGB4-201ENST00000519479 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
PCDHGB4-201ENST00000519479 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
PCDHGB4-201ENST00000519479 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
PCDHGB4-201ENST00000519479 SRGAP3O43295 1099 aa13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 TAF7Q15545 349 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 TBC1D9Q6ZT07 1266 aa13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 PTPRCP08575 1304 aa13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 CIZ1Q9ULV3 898 aaPredicted RBP13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 KIDINS220Q9ULH0 1771 aa13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 DRC7Q8IY82 874 aa13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 PRDM11Q9NQV5 511 aa13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
PCDHGB4-201ENST00000519479 BTBD11A6QL63 1104 aa13.65□□□□□ -0.22
PCDHGB4-201ENST00000519479 PIK3R4Q99570 1358 aa13.65□□□□□ -0.22
PCDHGB4-201ENST00000519479 FOXO3O43524 673 aa13.65□□□□□ -0.22
PCDHGB4-201ENST00000519479 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
PCDHGB4-201ENST00000519479 LTKP29376 864 aa13.65□□□□□ -0.22
PCDHGB4-201ENST00000519479 KRT28Q7Z3Y7 464 aa13.65□□□□□ -0.22
PCDHGB4-201ENST00000519479 KRT24Q2M2I5 525 aa13.65□□□□□ -0.22
PCDHGB4-201ENST00000519479 CLTCL1P53675 1640 aa13.64□□□□□ -0.23
PCDHGB4-201ENST00000519479 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
PCDHGB4-201ENST00000519479 MAP4K4O95819 1239 aaPredicted RBP13.64□□□□□ -0.23
PCDHGB4-201ENST00000519479 KIAA2012Q0VF49 1180 aa13.64□□□□□ -0.23
PCDHGB4-201ENST00000519479 FLIIQ13045 1269 aa13.64□□□□□ -0.23
PCDHGB4-201ENST00000519479 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
PCDHGB4-201ENST00000519479 MCM2P49736 904 aa13.64□□□□□ -0.23
PCDHGB4-201ENST00000519479 ZC3H13Q5T200 1668 aaKnown RBP13.64□□□□□ -0.23
PCDHGB4-201ENST00000519479 IL13P35225 146 aa13.64□□□□□ -0.23
PCDHGB4-201ENST00000519479 NPHP4O75161 1426 aaPredicted RBP13.63□□□□□ -0.23
PCDHGB4-201ENST00000519479 RNF17Q9BXT8 1623 aaKnown RBP13.63□□□□□ -0.23
PCDHGB4-201ENST00000519479 RNF20Q5VTR2 975 aa13.63□□□□□ -0.23
PCDHGB4-201ENST00000519479 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
PCDHGB4-201ENST00000519479 MEIS3Q99687 375 aa13.63□□□□□ -0.23
PCDHGB4-201ENST00000519479 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
PCDHGB4-201ENST00000519479 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
PCDHGB4-201ENST00000519479 TATP17735 454 aaPredicted RBP13.62□□□□□ -0.23
PCDHGB4-201ENST00000519479 MX1P20591 662 aa13.62□□□□□ -0.23
PCDHGB4-201ENST00000519479 PIP4K2BP78356 416 aa13.62□□□□□ -0.23
PCDHGB4-201ENST00000519479 CWC22Q9HCG8 908 aaKnown RBP13.62□□□□□ -0.23
PCDHGB4-201ENST00000519479 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
PCDHGB4-201ENST00000519479 ZC3H6P61129 1189 aaKnown RBP13.62□□□□□ -0.23
PCDHGB4-201ENST00000519479 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
PCDHGB4-201ENST00000519479 NUTM1Q86Y26 1132 aa13.62□□□□□ -0.23
PCDHGB4-201ENST00000519479 SPHKAPQ2M3C7 1700 aa13.62□□□□□ -0.23
PCDHGB4-201ENST00000519479 ARID3AQ99856 593 aa13.61□□□□□ -0.23
PCDHGB4-201ENST00000519479 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
PCDHGB4-201ENST00000519479 FSD1Q9BTV5 496 aa13.61□□□□□ -0.23
PCDHGB4-201ENST00000519479 EDC4Q6P2E9 1401 aaKnown RBP13.61□□□□□ -0.23
PCDHGB4-201ENST00000519479 H3BQV1 296 aa13.61□□□□□ -0.23
PCDHGB4-201ENST00000519479 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB4-201ENST00000519479 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB4-201ENST00000519479 IFFO2Q5TF58 517 aa13.61□□□□□ -0.23
PCDHGB4-201ENST00000519479 ERC1Q8IUD2 1116 aa13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 CAMSAP1Q5T5Y3 1602 aa13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 MTHFSDQ2M296 383 aaKnown RBP13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 MPRIPQ6WCQ1 1025 aa13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 MYL6BP14649 208 aa13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 TTC22Q5TAA0 569 aa13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 NEUROD6Q96NK8 337 aa13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 SIL1Q9H173 461 aa13.6□□□□□ -0.23
PCDHGB4-201ENST00000519479 GOLGA6L6A8MZA4 724 aa13.59□□□□□ -0.23
PCDHGB4-201ENST00000519479 KIF3AQ9Y496 699 aa13.59□□□□□ -0.23
PCDHGB4-201ENST00000519479 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
PCDHGB4-201ENST00000519479 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
PCDHGB4-201ENST00000519479 C16orf71Q8IYS4 520 aaPredicted RBP13.58□□□□□ -0.23
PCDHGB4-201ENST00000519479 ADGRB3O60242 1522 aa13.58□□□□□ -0.24
PCDHGB4-201ENST00000519479 MADDQ8WXG6 1647 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms