RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 MYBBP1AQ9BQG0 1328 aaKnown RBP30.34■■■□□ 2.45
SKP1-206ENST00000519321 PRKRIP1Q9H875 184 aaPredicted RBP30.34■■■□□ 2.45
SKP1-206ENST00000519321 NUDCQ9Y266 331 aa30.34■■■□□ 2.45
SKP1-206ENST00000519321 BCL9O00512 1426 aa30.33■■■□□ 2.45
SKP1-206ENST00000519321 KDRP35968 1356 aa30.32■■■□□ 2.44
SKP1-206ENST00000519321 SULT6B1Q6IMI4 303 aa30.32■■■□□ 2.44
SKP1-206ENST00000519321 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.32■■■□□ 2.443e-9■■□□□ 13.9
SKP1-206ENST00000519321 SPG7Q9UQ90 795 aa30.31■■■□□ 2.44
SKP1-206ENST00000519321 DDX54Q8TDD1 881 aaKnown RBP30.3■■■□□ 2.44
SKP1-206ENST00000519321 PCDH11XQ9BZA7 1347 aa30.29■■■□□ 2.44
SKP1-206ENST00000519321 PCDH11YQ9BZA8 1340 aa30.29■■■□□ 2.44
SKP1-206ENST00000519321 U2SURPO15042 1029 aaKnown RBP30.29■■■□□ 2.44
SKP1-206ENST00000519321 SF3B2Q13435 895 aaKnown RBP30.29■■■□□ 2.44
SKP1-206ENST00000519321 PKD1L3Q7Z443 1732 aa30.28■■■□□ 2.44
SKP1-206ENST00000519321 AEBP1Q8IUX7 1158 aa30.27■■■□□ 2.44
SKP1-206ENST00000519321 AMOTQ4VCS5 1084 aa30.26■■■□□ 2.43
SKP1-206ENST00000519321 SHANK3Q9BYB0 1731 aa30.26■■■□□ 2.43
SKP1-206ENST00000519321 PLEKHO1Q53GL0 409 aaPredicted RBP30.25■■■□□ 2.43
SKP1-206ENST00000519321 ANP32CO43423 234 aa30.23■■■□□ 2.43
SKP1-206ENST00000519321 TRIM37O94972 964 aa30.23■■■□□ 2.43
SKP1-206ENST00000519321 HMOX1P09601 288 aa30.23■■■□□ 2.43
SKP1-206ENST00000519321 SBF2Q86WG5 1849 aa30.2■■■□□ 2.43
SKP1-206ENST00000519321 EP400Q96L91 3159 aa30.2■■■□□ 2.42
SKP1-206ENST00000519321 CYP27B1O15528 508 aa30.19■■■□□ 2.42
SKP1-206ENST00000519321 U2AF1L5P0DN76 240 aaPredicted RBP30.19■■■□□ 2.42
SKP1-206ENST00000519321 U2AF1Q01081 240 aaKnown RBP eCLIP30.19■■■□□ 2.429e-7■■■■□ 24.3
SKP1-206ENST00000519321 IFNL2Q8IZJ0 200 aa30.19■■■□□ 2.42
SKP1-206ENST00000519321 BCL11BQ9C0K0 894 aaPredicted RBP30.19■■■□□ 2.42
SKP1-206ENST00000519321 BAG6P46379 1132 aa30.18■■■□□ 2.42
SKP1-206ENST00000519321 TNS1Q9HBL0 1735 aaKnown RBP30.16■■■□□ 2.42
SKP1-206ENST00000519321 NHSQ6T4R5 1651 aa30.15■■■□□ 2.42
SKP1-206ENST00000519321 FCHSD2O94868 740 aa30.15■■■□□ 2.42
SKP1-206ENST00000519321 PHKG2P15735 406 aa30.15■■■□□ 2.42
SKP1-206ENST00000519321 NKX1-1Q15270 411 aaPredicted RBP30.15■■■□□ 2.42
SKP1-206ENST00000519321 HSP90AB1P08238 724 aaKnown RBP30.14■■■□□ 2.42
SKP1-206ENST00000519321 ZNF530Q6P9A1 599 aaPredicted RBP30.14■■■□□ 2.42
SKP1-206ENST00000519321 ACSBG1Q96GR2 724 aa30.14■■■□□ 2.42
SKP1-206ENST00000519321 APBA3O96018 575 aa30.13■■■□□ 2.41
SKP1-206ENST00000519321 C1orf141Q5JVX7 400 aa30.13■■■□□ 2.41
SKP1-206ENST00000519321 RSPH6AQ9H0K4 717 aa30.12■■■□□ 2.41
SKP1-206ENST00000519321 PNNQ9H307 717 aaKnown RBP30.11■■■□□ 2.41
SKP1-206ENST00000519321 PRKAR2BP31323 418 aa30.1■■■□□ 2.41
SKP1-206ENST00000519321 DOT1LQ8TEK3 1739 aa30.1■■■□□ 2.41
SKP1-206ENST00000519321 KCNQ2O43526 872 aa30.09■■■□□ 2.41
SKP1-206ENST00000519321 KAT6BQ8WYB5 2073 aa30.08■■■□□ 2.41
SKP1-206ENST00000519321 NEFMP07197 916 aa30.08■■■□□ 2.41
SKP1-206ENST00000519321 SYTL4Q96C24 671 aaPredicted RBP30.08■■■□□ 2.41
SKP1-206ENST00000519321 PRIM1P49642 420 aaKnown RBP30.07■■■□□ 2.4
SKP1-206ENST00000519321 AKAP4Q5JQC9 854 aa30.07■■■□□ 2.4
SKP1-206ENST00000519321 DEFB132Q7Z7B7 95 aa30.07■■■□□ 2.4
SKP1-206ENST00000519321 GAS2L2Q8NHY3 880 aa30.07■■■□□ 2.4
SKP1-206ENST00000519321 DCAF5Q96JK2 942 aa30.07■■■□□ 2.4
SKP1-206ENST00000519321 PLSCR1O15162 318 aa30.05■■■□□ 2.4
SKP1-206ENST00000519321 WDR43Q15061 677 aaKnown RBP eCLIP30.05■■■□□ 2.4
SKP1-206ENST00000519321 MTHFSDQ2M296 383 aaKnown RBP30.05■■■□□ 2.4
SKP1-206ENST00000519321 EN1Q05925 392 aaPredicted RBP30.04■■■□□ 2.4
SKP1-206ENST00000519321 PTF1AQ7RTS3 328 aa30.04■■■□□ 2.4
SKP1-206ENST00000519321 RGPD3A6NKT7 1758 aaPredicted RBP30.02■■■□□ 2.4
SKP1-206ENST00000519321 RGPD4Q7Z3J3 1758 aa30.02■■■□□ 2.4
SKP1-206ENST00000519321 BTAF1O14981 1849 aa30.01■■■□□ 2.4
SKP1-206ENST00000519321 ERVV-2B6SEH9 535 aa30.01■■■□□ 2.39
SKP1-206ENST00000519321 CAMKK2Q96RR4 588 aa30.01■■■□□ 2.39
SKP1-206ENST00000519321 TOGARAM1Q9Y4F4 1720 aa30.01■■■□□ 2.39
SKP1-206ENST00000519321 PHACTR3Q96KR7 559 aa30■■■□□ 2.39
SKP1-206ENST00000519321 MPRIPQ6WCQ1 1025 aa29.99■■■□□ 2.39
SKP1-206ENST00000519321 EZH2Q15910 746 aaKnown RBP29.98■■■□□ 2.39
SKP1-206ENST00000519321 TMOD3Q9NYL9 352 aa29.98■■■□□ 2.39
SKP1-206ENST00000519321 MAPK8IP3Q9UPT6 1336 aa29.97■■■□□ 2.39
SKP1-206ENST00000519321 KDM6AO15550 1401 aaPredicted RBP29.97■■■□□ 2.39
SKP1-206ENST00000519321 ITGB4P16144 1822 aa29.97■■■□□ 2.39
SKP1-206ENST00000519321 MAP3K5Q99683 1374 aa29.96■■■□□ 2.39
SKP1-206ENST00000519321 GNAT3A8MTJ3 354 aa29.96■■■□□ 2.39
SKP1-206ENST00000519321 PLEKHF1Q96S99 279 aa29.96■■■□□ 2.39
SKP1-206ENST00000519321 CABP4P57796 275 aa29.95■■■□□ 2.39
SKP1-206ENST00000519321 MRS2Q9HD23 443 aa29.94■■■□□ 2.38
SKP1-206ENST00000519321 SCN11AQ9UI33 1791 aa29.94■■■□□ 2.38
SKP1-206ENST00000519321 RNMTO43148 476 aaKnown RBP29.93■■■□□ 2.38
SKP1-206ENST00000519321 PIGBQ92521 554 aa29.93■■■□□ 2.38
SKP1-206ENST00000519321 SMARCC1Q92922 1105 aaPredicted RBP29.92■■■□□ 2.38
SKP1-206ENST00000519321 ADAMTS8Q9UP79 889 aa29.92■■■□□ 2.38
SKP1-206ENST00000519321 RREB1Q92766 1687 aa29.91■■■□□ 2.38
SKP1-206ENST00000519321 HTATSF1O43719 755 aaKnown RBP29.9■■■□□ 2.38
SKP1-206ENST00000519321 TXNRD1Q16881 649 aa29.9■■■□□ 2.38
SKP1-206ENST00000519321 CCDC184Q52MB2 194 aa29.9■■■□□ 2.38
SKP1-206ENST00000519321 ADAMTS7Q9UKP4 1686 aa29.9■■■□□ 2.38
SKP1-206ENST00000519321 RTF1Q92541 710 aaKnown RBP29.89■■■□□ 2.38
SKP1-206ENST00000519321 LGR6Q9HBX8 967 aa29.89■■■□□ 2.38
SKP1-206ENST00000519321 RUNDC1Q96C34 613 aa29.88■■■□□ 2.37
SKP1-206ENST00000519321 HMGB2P26583 209 aaKnown RBP29.87■■■□□ 2.37
SKP1-206ENST00000519321 NFE2L2Q16236 605 aa29.87■■■□□ 2.37
SKP1-206ENST00000519321 SLC27A3Q5K4L6 730 aa29.87■■■□□ 2.37
SKP1-206ENST00000519321 DIEXFQ68CQ4 756 aaKnown RBP29.87■■■□□ 2.37
SKP1-206ENST00000519321 NFATC2IPQ8NCF5 419 aa29.87■■■□□ 2.37
SKP1-206ENST00000519321 SLC52A2Q9HAB3 445 aa29.87■■■□□ 2.37
SKP1-206ENST00000519321 VIRMAQ69YN4 1812 aaKnown RBP29.87■■■□□ 2.37
SKP1-206ENST00000519321 PROM2Q8N271 834 aa29.86■■■□□ 2.37
SKP1-206ENST00000519321 PALLDQ8WX93 1383 aa29.86■■■□□ 2.37
SKP1-206ENST00000519321 MRC1P22897 1456 aa29.86■■■□□ 2.37
SKP1-206ENST00000519321 LY75O60449 1722 aa29.85■■■□□ 2.37
SKP1-206ENST00000519321 PNISRQ8TF01 805 aaKnown RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms