RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 BRPF3Q9ULD4 1205 aa10.22□□□□□ -0.77
CLK4-202ENST00000519132 STAU1O95793 577 aaKnown RBP10.21□□□□□ -0.77
CLK4-202ENST00000519132 PNMA1Q8ND90 353 aa10.21□□□□□ -0.77
CLK4-202ENST00000519132 TRAF7Q6Q0C0 670 aa10.21□□□□□ -0.78
CLK4-202ENST00000519132 SAMD7Q7Z3H4 446 aa10.21□□□□□ -0.78
CLK4-202ENST00000519132 NT5DC4Q86YG4 428 aa10.21□□□□□ -0.78
CLK4-202ENST00000519132 NFATC2IPQ8NCF5 419 aa10.21□□□□□ -0.78
CLK4-202ENST00000519132 TPCN2Q8NHX9 752 aa10.21□□□□□ -0.78
CLK4-202ENST00000519132 CXXC1Q9P0U4 656 aaPredicted RBP10.21□□□□□ -0.78
CLK4-202ENST00000519132 SAMD9Q5K651 1589 aa10.21□□□□□ -0.78
CLK4-202ENST00000519132 ANKRD62A6NC57 917 aa10.2□□□□□ -0.78
CLK4-202ENST00000519132 FKBP5Q13451 457 aaPredicted RBP10.2□□□□□ -0.78
CLK4-202ENST00000519132 OXLD1Q5BKU9 147 aa10.2□□□□□ -0.78
CLK4-202ENST00000519132 TSEN2Q8NCE0 465 aaKnown RBP10.2□□□□□ -0.78
CLK4-202ENST00000519132 PIK3R5Q8WYR1 880 aa10.2□□□□□ -0.78
CLK4-202ENST00000519132 CCDC85AQ96PX6 553 aaPredicted RBP10.2□□□□□ -0.78
CLK4-202ENST00000519132 LYPD8Q6UX82 237 aa10.2□□□□□ -0.78
CLK4-202ENST00000519132 RETREG3Q86VR2 466 aa10.2□□□□□ -0.78
CLK4-202ENST00000519132 CHMP7Q8WUX9 453 aaPredicted RBP10.2□□□□□ -0.78
CLK4-202ENST00000519132 ASB16Q96NS5 453 aa10.2□□□□□ -0.78
CLK4-202ENST00000519132 ATP5J2-PTCD1G3V325 749 aa10.19□□□□□ -0.78
CLK4-202ENST00000519132 DNAAF2Q9NVR5 837 aaKnown RBP10.19□□□□□ -0.78
CLK4-202ENST00000519132 WWC3Q9ULE0 1092 aa10.19□□□□□ -0.78
CLK4-202ENST00000519132 UGGT2Q9NYU1 1516 aa10.19□□□□□ -0.78
CLK4-202ENST00000519132 ARHGAP35Q9NRY4 1499 aa10.19□□□□□ -0.78
CLK4-202ENST00000519132 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
CLK4-202ENST00000519132 ANP32EQ9BTT0 268 aa10.18□□□□□ -0.78
CLK4-202ENST00000519132 MRPL58Q14197 206 aaKnown RBP10.18□□□□□ -0.78
CLK4-202ENST00000519132 LNPKQ9C0E8 428 aa10.18□□□□□ -0.78
CLK4-202ENST00000519132 F12P00748 615 aaPredicted RBP10.18□□□□□ -0.78
CLK4-202ENST00000519132 TAS1R3Q7RTX0 852 aa10.18□□□□□ -0.78
CLK4-202ENST00000519132 TANGO6Q9C0B7 1094 aa10.18□□□□□ -0.78
CLK4-202ENST00000519132 C21orf2O43822 256 aa10.17□□□□□ -0.78
CLK4-202ENST00000519132 CTHP32929 405 aa10.17□□□□□ -0.78
CLK4-202ENST00000519132 SWI5Q1ZZU3 235 aa10.17□□□□□ -0.78
CLK4-202ENST00000519132 TAF7LQ5H9L4 462 aa10.17□□□□□ -0.78
CLK4-202ENST00000519132 DCTN4Q9UJW0 460 aa10.17□□□□□ -0.78
CLK4-202ENST00000519132 ARAP1Q96P48 1450 aa10.16□□□□□ -0.78
CLK4-202ENST00000519132 PPP4R3BQ5MIZ7 849 aa10.16□□□□□ -0.78
CLK4-202ENST00000519132 TMC7Q7Z402 723 aa10.16□□□□□ -0.78
CLK4-202ENST00000519132 METTL16Q86W50 562 aaKnown RBP10.16□□□□□ -0.78
CLK4-202ENST00000519132 HINFPQ9BQA5 517 aa10.16□□□□□ -0.78
CLK4-202ENST00000519132 VAMP1P23763 118 aa10.16□□□□□ -0.78
CLK4-202ENST00000519132 ACBD3Q9H3P7 528 aa10.16□□□□□ -0.78
CLK4-202ENST00000519132 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.16□□□□□ -0.78
CLK4-202ENST00000519132 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
CLK4-202ENST00000519132 SHROOM2Q13796 1616 aa10.15□□□□□ -0.78
CLK4-202ENST00000519132 MORN1Q5T089 497 aa10.15□□□□□ -0.78
CLK4-202ENST00000519132 CCDC102BQ68D86 513 aa10.15□□□□□ -0.78
CLK4-202ENST00000519132 FMNL1O95466 1100 aaPredicted RBP10.15□□□□□ -0.79
CLK4-202ENST00000519132 PIF1Q9H611 641 aa10.15□□□□□ -0.79
CLK4-202ENST00000519132 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.79
CLK4-202ENST00000519132 VPS8Q8N3P4 1428 aa10.14□□□□□ -0.79
CLK4-202ENST00000519132 ADAM32Q8TC27 787 aa10.14□□□□□ -0.79
CLK4-202ENST00000519132 CARD14Q9BXL6 1004 aa10.14□□□□□ -0.79
CLK4-202ENST00000519132 CLASP1Q7Z460 1538 aa10.14□□□□□ -0.79
CLK4-202ENST00000519132 GTF2F1P35269 517 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLK4-202ENST00000519132 GTF2IP78347 998 aa10.14□□□□□ -0.79
CLK4-202ENST00000519132 PSME1Q06323 249 aa10.14□□□□□ -0.79
CLK4-202ENST00000519132 HIRIP3Q9BW71 556 aaPredicted RBP10.14□□□□□ -0.79
CLK4-202ENST00000519132 GPATCH3Q96I76 525 aa10.13□□□□□ -0.79
CLK4-202ENST00000519132 EML3Q32P44 896 aa10.13□□□□□ -0.79
CLK4-202ENST00000519132 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLK4-202ENST00000519132 TINF2Q9BSI4 451 aa10.13□□□□□ -0.79
CLK4-202ENST00000519132 KIAA0556O60303 1618 aa10.13□□□□□ -0.79
CLK4-202ENST00000519132 GABBR2O75899 941 aa10.12□□□□□ -0.79
CLK4-202ENST00000519132 TMEM87AQ8NBN3 555 aa10.12□□□□□ -0.79
CLK4-202ENST00000519132 PRDM9Q9NQV7 894 aa10.12□□□□□ -0.79
CLK4-202ENST00000519132 PCDHGB7Q9Y5F8 929 aa10.12□□□□□ -0.79
CLK4-202ENST00000519132 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
CLK4-202ENST00000519132 MAPK8P45983 427 aa10.12□□□□□ -0.79
CLK4-202ENST00000519132 ZBED2Q9BTP6 218 aa10.12□□□□□ -0.79
CLK4-202ENST00000519132 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
CLK4-202ENST00000519132 DISP1Q96F81 1524 aa10.11□□□□□ -0.79
CLK4-202ENST00000519132 SAP130Q9H0E3 1048 aa10.11□□□□□ -0.79
CLK4-202ENST00000519132 PRKAG2Q9UGJ0 569 aa10.11□□□□□ -0.79
CLK4-202ENST00000519132 BRD2P25440 801 aaKnown RBP10.1□□□□□ -0.79
CLK4-202ENST00000519132 DNAJA1P31689 397 aaKnown RBP10.1□□□□□ -0.79
CLK4-202ENST00000519132 CCDC87Q9NVE4 849 aa10.1□□□□□ -0.79
CLK4-202ENST00000519132 MPSTP25325 297 aa10.1□□□□□ -0.79
CLK4-202ENST00000519132 SEC13P55735 322 aa10.1□□□□□ -0.79
CLK4-202ENST00000519132 PMFBP1Q8TBY8 1022 aa10.1□□□□□ -0.79
CLK4-202ENST00000519132 CAPN10Q9HC96 672 aa10.1□□□□□ -0.79
CLK4-202ENST00000519132 POTEJP0CG39 1038 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 CCDC144BQ3MJ40 725 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 POTEEQ6S8J3 1075 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 C1orf216Q8TAB5 229 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 DUSP9Q99956 384 aaKnown RBP10.09□□□□□ -0.79
CLK4-202ENST00000519132 FMN1Q68DA7 1419 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 FGD1P98174 961 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 FKBP4Q02790 459 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLK4-202ENST00000519132 PARP2Q9UGN5 583 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 POTEHQ6S545 545 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 SIX5Q8N196 739 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
CLK4-202ENST00000519132 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
CLK4-202ENST00000519132 GIGYF1O75420 1035 aaPredicted RBP10.08□□□□□ -0.8
CLK4-202ENST00000519132 FANCCQ00597 558 aa10.08□□□□□ -0.8
CLK4-202ENST00000519132 RGL4Q8IZJ4 473 aa10.08□□□□□ -0.8
CLK4-202ENST00000519132 SCAMP3O14828 347 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms