RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 OVOS2A0A0G2JMS6 1433 aa28.26■■■□□ 2.11
PCM1-210ENST00000518936 A0A0G2JS52 829 aa28.25■■■□□ 2.11
PCM1-210ENST00000518936 MYT1Q01538 1121 aa28.25■■■□□ 2.11
PCM1-210ENST00000518936 FAM98CQ17RN3 349 aaKnown RBP28.25■■■□□ 2.11
PCM1-210ENST00000518936 RSPH6AQ9H0K4 717 aa28.25■■■□□ 2.11
PCM1-210ENST00000518936 DISP2A7MBM2 1401 aa28.25■■■□□ 2.11
PCM1-210ENST00000518936 EXOC5O00471 708 aa28.24■■■□□ 2.11
PCM1-210ENST00000518936 PRKAR2BP31323 418 aa28.23■■■□□ 2.11
PCM1-210ENST00000518936 DDB1Q16531 1140 aa28.23■■■□□ 2.11
PCM1-210ENST00000518936 RGS17Q9UGC6 210 aaPredicted RBP28.23■■■□□ 2.11
PCM1-210ENST00000518936 ADAMTS8Q9UP79 889 aa28.23■■■□□ 2.11
PCM1-210ENST00000518936 CCDC184Q52MB2 194 aa28.22■■■□□ 2.11
PCM1-210ENST00000518936 GAS2L2Q8NHY3 880 aa28.22■■■□□ 2.11
PCM1-210ENST00000518936 RUNDC1Q96C34 613 aa28.22■■■□□ 2.11
PCM1-210ENST00000518936 AEBP1Q8IUX7 1158 aa28.21■■■□□ 2.11
PCM1-210ENST00000518936 FAM9BQ8IZU0 186 aa28.21■■■□□ 2.11
PCM1-210ENST00000518936 ZCRB1Q8TBF4 217 aaKnown RBP28.21■■■□□ 2.11
PCM1-210ENST00000518936 THSD7AQ9UPZ6 1657 aa28.21■■■□□ 2.11
PCM1-210ENST00000518936 PCDH11XQ9BZA7 1347 aa28.2■■■□□ 2.11
PCM1-210ENST00000518936 PCDH11YQ9BZA8 1340 aa28.2■■■□□ 2.11
PCM1-210ENST00000518936 TNS2Q63HR2 1409 aa28.2■■■□□ 2.11
PCM1-210ENST00000518936 MEGF6O75095 1541 aa28.2■■■□□ 2.1
PCM1-210ENST00000518936 PKD1L3Q7Z443 1732 aa28.2■■■□□ 2.1
PCM1-210ENST00000518936 HSP90AB1P08238 724 aaKnown RBP28.18■■■□□ 2.1
PCM1-210ENST00000518936 PDE3BQ13370 1112 aa28.18■■■□□ 2.1
PCM1-210ENST00000518936 C1orf141Q5JVX7 400 aa28.18■■■□□ 2.1
PCM1-210ENST00000518936 NGEFQ8N5V2 710 aa28.18■■■□□ 2.1
PCM1-210ENST00000518936 POTEAQ6S8J7 498 aa28.17■■■□□ 2.1
PCM1-210ENST00000518936 SEPT12Q8IYM1 358 aa28.17■■■□□ 2.1
PCM1-210ENST00000518936 LRRC37A3O60309 1634 aa28.15■■■□□ 2.1
PCM1-210ENST00000518936 PLEKHF1Q96S99 279 aa28.15■■■□□ 2.1
PCM1-210ENST00000518936 LMOD3Q0VAK6 560 aa28.14■■■□□ 2.1
PCM1-210ENST00000518936 IFNL2Q8IZJ0 200 aa28.14■■■□□ 2.1
PCM1-210ENST00000518936 NCBP3Q53F19 620 aaKnown RBP28.12■■■□□ 2.09
PCM1-210ENST00000518936 AKAP4Q5JQC9 854 aa28.11■■■□□ 2.09
PCM1-210ENST00000518936 ZNF530Q6P9A1 599 aaPredicted RBP28.11■■■□□ 2.09
PCM1-210ENST00000518936 HTATSF1O43719 755 aaKnown RBP28.1■■■□□ 2.09
PCM1-210ENST00000518936 NFE2L2Q16236 605 aa28.09■■■□□ 2.09
PCM1-210ENST00000518936 RTF1Q92541 710 aaKnown RBP28.09■■■□□ 2.09
PCM1-210ENST00000518936 KRT27Q7Z3Y8 459 aa28.08■■■□□ 2.09
PCM1-210ENST00000518936 MTHFSDQ2M296 383 aaKnown RBP28.07■■■□□ 2.08
PCM1-210ENST00000518936 DDX54Q8TDD1 881 aaKnown RBP28.07■■■□□ 2.08
PCM1-210ENST00000518936 GNAT3A8MTJ3 354 aa28.06■■■□□ 2.08
PCM1-210ENST00000518936 CCDC146Q8IYE0 955 aa28.06■■■□□ 2.08
PCM1-210ENST00000518936 PHACTR3Q96KR7 559 aa28.06■■■□□ 2.08
PCM1-210ENST00000518936 MAP3K5Q99683 1374 aa28.06■■■□□ 2.08
PCM1-210ENST00000518936 RGS12O14924 1447 aa28.06■■■□□ 2.08
PCM1-210ENST00000518936 PHKG2P15735 406 aa28.05■■■□□ 2.08
PCM1-210ENST00000518936 DCAF5Q96JK2 942 aa28.05■■■□□ 2.08
PCM1-210ENST00000518936 SHANK3Q9BYB0 1731 aa28.04■■■□□ 2.08
PCM1-210ENST00000518936 TMPOP42166 694 aaKnown RBP28.04■■■□□ 2.08
PCM1-210ENST00000518936 BCL9O00512 1426 aa28.03■■■□□ 2.08
PCM1-210ENST00000518936 NKX1-1Q15270 411 aaPredicted RBP28.03■■■□□ 2.08
PCM1-210ENST00000518936 RIPK4P57078 832 aa28.02■■■□□ 2.08
PCM1-210ENST00000518936 CALD1Q05682 793 aaKnown RBP28.02■■■□□ 2.08
PCM1-210ENST00000518936 FAM196AQ6ZSG2 479 aa28.02■■■□□ 2.08
PCM1-210ENST00000518936 BRWD3Q6RI45 1802 aa28.02■■■□□ 2.08
PCM1-210ENST00000518936 CYP27B1O15528 508 aa28.01■■■□□ 2.07
PCM1-210ENST00000518936 APAF1O14727 1248 aa28■■■□□ 2.07
PCM1-210ENST00000518936 CCDC27Q2M243 656 aa27.99■■■□□ 2.07
PCM1-210ENST00000518936 DLG5Q8TDM6 1919 aa27.98■■■□□ 2.07
PCM1-210ENST00000518936 MARCH10Q8NA82 808 aaPredicted RBP27.98■■■□□ 2.07
PCM1-210ENST00000518936 ERVV-2B6SEH9 535 aa27.97■■■□□ 2.07
PCM1-210ENST00000518936 SCN11AQ9UI33 1791 aa27.95■■■□□ 2.06
PCM1-210ENST00000518936 TEFQ10587 303 aa27.94■■■□□ 2.06
PCM1-210ENST00000518936 NEUROD2Q15784 382 aa27.94■■■□□ 2.06
PCM1-210ENST00000518936 ADAMTS7Q9UKP4 1686 aa27.92■■■□□ 2.06
PCM1-210ENST00000518936 VIRMAQ69YN4 1812 aaKnown RBP27.92■■■□□ 2.06
PCM1-210ENST00000518936 RNMTO43148 476 aaKnown RBP27.91■■■□□ 2.06
PCM1-210ENST00000518936 MPRIPQ6WCQ1 1025 aa27.91■■■□□ 2.06
PCM1-210ENST00000518936 KAT6BQ8WYB5 2073 aa27.91■■■□□ 2.06
PCM1-210ENST00000518936 CEMIPQ8WUJ3 1361 aa27.9■■■□□ 2.06
PCM1-210ENST00000518936 CABP4P57796 275 aa27.89■■■□□ 2.06
PCM1-210ENST00000518936 TMOD3Q9NYL9 352 aa27.89■■■□□ 2.06
PCM1-210ENST00000518936 RRP7AQ9Y3A4 280 aaKnown RBP27.89■■■□□ 2.06
PCM1-210ENST00000518936 DOT1LQ8TEK3 1739 aa27.88■■■□□ 2.05
PCM1-210ENST00000518936 BABAM1Q9NWV8 329 aa27.88■■■□□ 2.05
PCM1-210ENST00000518936 MRC1P22897 1456 aa27.88■■■□□ 2.05
PCM1-210ENST00000518936 KDM6AO15550 1401 aaPredicted RBP27.87■■■□□ 2.05
PCM1-210ENST00000518936 HMGB2P26583 209 aaKnown RBP27.87■■■□□ 2.05
PCM1-210ENST00000518936 HNRNPUQ00839 825 aaKnown RBP eCLIP27.87■■■□□ 2.05
PCM1-210ENST00000518936 WDR63Q8IWG1 891 aa27.86■■■□□ 2.05
PCM1-210ENST00000518936 SLC52A2Q9HAB3 445 aa27.86■■■□□ 2.05
PCM1-210ENST00000518936 NHSQ6T4R5 1651 aa27.86■■■□□ 2.05
PCM1-210ENST00000518936 TRIM35Q9UPQ4 493 aa27.85■■■□□ 2.05
PCM1-210ENST00000518936 IL16Q14005 1332 aa27.85■■■□□ 2.05
PCM1-210ENST00000518936 SBF2Q86WG5 1849 aa27.85■■■□□ 2.05
PCM1-210ENST00000518936 MCM10Q7L590 875 aa27.84■■■□□ 2.05
PCM1-210ENST00000518936 WWC1Q8IX03 1113 aa27.84■■■□□ 2.05
PCM1-210ENST00000518936 IL17REQ8NFR9 667 aa27.84■■■□□ 2.05
PCM1-210ENST00000518936 SYTL4Q96C24 671 aaPredicted RBP27.84■■■□□ 2.05
PCM1-210ENST00000518936 BCL11BQ9C0K0 894 aaPredicted RBP27.84■■■□□ 2.05
PCM1-210ENST00000518936 ITGB4P16144 1822 aa27.83■■■□□ 2.05
PCM1-210ENST00000518936 TAF7Q15545 349 aaPredicted RBP27.83■■■□□ 2.05
PCM1-210ENST00000518936 CCDC125Q86Z20 511 aa27.83■■■□□ 2.05
PCM1-210ENST00000518936 SF3B2Q13435 895 aaKnown RBP27.82■■■□□ 2.04
PCM1-210ENST00000518936 LGR6Q9HBX8 967 aa27.82■■■□□ 2.04
PCM1-210ENST00000518936 TOGARAM1Q9Y4F4 1720 aa27.81■■■□□ 2.04
PCM1-210ENST00000518936 PRIM1P49642 420 aaKnown RBP27.81■■■□□ 2.04
PCM1-210ENST00000518936 GNAI1P63096 354 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms