RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 HMGB2P26583 209 aaKnown RBP14.26□□□□□ -0.13
SH2D4A-202ENST00000518040 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
SH2D4A-202ENST00000518040 ERBB3P21860 1342 aa14.25□□□□□ -0.13
SH2D4A-202ENST00000518040 NFAT5O94916 1531 aa14.24□□□□□ -0.13
SH2D4A-202ENST00000518040 SOX12O15370 315 aa14.24□□□□□ -0.13
SH2D4A-202ENST00000518040 EVC2Q86UK5 1308 aa14.24□□□□□ -0.13
SH2D4A-202ENST00000518040 KAT6BQ8WYB5 2073 aa14.23□□□□□ -0.13
SH2D4A-202ENST00000518040 NBPF1Q3BBV0 1214 aa14.23□□□□□ -0.13
SH2D4A-202ENST00000518040 RBM42Q9BTD8 480 aaKnown RBP14.23□□□□□ -0.13
SH2D4A-202ENST00000518040 CD2APQ9Y5K6 639 aa14.23□□□□□ -0.13
SH2D4A-202ENST00000518040 ADCY9O60503 1353 aa14.22□□□□□ -0.13
SH2D4A-202ENST00000518040 APLP1P51693 650 aa14.2□□□□□ -0.14
SH2D4A-202ENST00000518040 TUBGCP6Q96RT7 1819 aa14.19□□□□□ -0.14
SH2D4A-202ENST00000518040 FLAD1Q8NFF5 587 aa14.18□□□□□ -0.14
SH2D4A-202ENST00000518040 ANKRD24Q8TF21 1146 aa14.18□□□□□ -0.14
SH2D4A-202ENST00000518040 USP31Q70CQ4 1352 aa14.18□□□□□ -0.14
SH2D4A-202ENST00000518040 KTN1Q86UP2 1357 aaKnown RBP14.18□□□□□ -0.14
SH2D4A-202ENST00000518040 ANKRD36BQ8N2N9 1353 aa14.18□□□□□ -0.14
SH2D4A-202ENST00000518040 DDX54Q8TDD1 881 aaKnown RBP14.17□□□□□ -0.14
SH2D4A-202ENST00000518040 ZNF526Q8TF50 670 aaPredicted RBP14.17□□□□□ -0.14
SH2D4A-202ENST00000518040 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
SH2D4A-202ENST00000518040 CCNL1Q9UK58 526 aaPredicted RBP14.17□□□□□ -0.14
SH2D4A-202ENST00000518040 LY75O60449 1722 aa14.17□□□□□ -0.14
SH2D4A-202ENST00000518040 POTEHQ6S545 545 aa14.17□□□□□ -0.14
SH2D4A-202ENST00000518040 COL23A1Q86Y22 540 aaPredicted RBP14.17□□□□□ -0.14
SH2D4A-202ENST00000518040 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
SH2D4A-202ENST00000518040 USP54Q70EL1 1684 aa14.15□□□□□ -0.14
SH2D4A-202ENST00000518040 KIF3CO14782 793 aa14.14□□□□□ -0.15
SH2D4A-202ENST00000518040 USP47Q96K76 1375 aa14.14□□□□□ -0.15
SH2D4A-202ENST00000518040 KCNQ4P56696 695 aa14.14□□□□□ -0.15
SH2D4A-202ENST00000518040 LTN1O94822 1766 aa14.13□□□□□ -0.15
SH2D4A-202ENST00000518040 ATXN8OSP0DMR3 200 aa14.13□□□□□ -0.15
SH2D4A-202ENST00000518040 FAM208AQ9UK61 1670 aaKnown RBP14.13□□□□□ -0.15
SH2D4A-202ENST00000518040 TOMM70O94826 608 aa14.12□□□□□ -0.15
SH2D4A-202ENST00000518040 MSL1Q68DK7 614 aa14.12□□□□□ -0.15
SH2D4A-202ENST00000518040 DNAJC5GQ8N7S2 189 aa14.12□□□□□ -0.15
SH2D4A-202ENST00000518040 NSD2O96028 1365 aa14.12□□□□□ -0.15
SH2D4A-202ENST00000518040 MON2Q7Z3U7 1717 aa14.12□□□□□ -0.15
SH2D4A-202ENST00000518040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.11□□□□□ -0.15
SH2D4A-202ENST00000518040 ZBTB12Q9Y330 459 aaPredicted RBP14.11□□□□□ -0.15
SH2D4A-202ENST00000518040 DOT1LQ8TEK3 1739 aa14.1□□□□□ -0.15
SH2D4A-202ENST00000518040 IGSF1Q8N6C5 1336 aa14.1□□□□□ -0.15
SH2D4A-202ENST00000518040 ZCRB1Q8TBF4 217 aaKnown RBP14.1□□□□□ -0.15
SH2D4A-202ENST00000518040 IP6K1Q92551 441 aa14.1□□□□□ -0.15
SH2D4A-202ENST00000518040 NME9Q86XW9 330 aa14.08□□□□□ -0.16
SH2D4A-202ENST00000518040 NSD3Q9BZ95 1437 aa14.08□□□□□ -0.16
SH2D4A-202ENST00000518040 HDGFL2Q7Z4V5 671 aaPredicted RBP14.07□□□□□ -0.16
SH2D4A-202ENST00000518040 CGNL1Q0VF96 1302 aa14.07□□□□□ -0.16
SH2D4A-202ENST00000518040 C5P01031 1676 aa14.07□□□□□ -0.16
SH2D4A-202ENST00000518040 SBNO2Q9Y2G9 1366 aa14.07□□□□□ -0.16
SH2D4A-202ENST00000518040 CICQ96RK0 1608 aaPredicted RBP14.06□□□□□ -0.16
SH2D4A-202ENST00000518040 EDC4Q6P2E9 1401 aaKnown RBP14.05□□□□□ -0.16
SH2D4A-202ENST00000518040 JMYQ8N9B5 988 aa14.04□□□□□ -0.16
SH2D4A-202ENST00000518040 KLRG1Q96E93 195 aa14.04□□□□□ -0.16
SH2D4A-202ENST00000518040 LTV1Q96GA3 475 aaPredicted RBP14.04□□□□□ -0.16
SH2D4A-202ENST00000518040 AK7Q96M32 723 aa14.04□□□□□ -0.16
SH2D4A-202ENST00000518040 PRELPP51888 382 aa14.04□□□□□ -0.16
SH2D4A-202ENST00000518040 RBM46Q8TBY0 533 aaKnown RBP14.04□□□□□ -0.16
SH2D4A-202ENST00000518040 TERF2IPQ9NYB0 399 aa14.04□□□□□ -0.16
SH2D4A-202ENST00000518040 COL13A1Q5TAT6 717 aaPredicted RBP14.03□□□□□ -0.16
SH2D4A-202ENST00000518040 TNS4Q8IZW8 715 aa14.03□□□□□ -0.16
SH2D4A-202ENST00000518040 SMARCC1Q92922 1105 aaPredicted RBP14.03□□□□□ -0.16
SH2D4A-202ENST00000518040 WDR90Q96KV7 1748 aa14.03□□□□□ -0.16
SH2D4A-202ENST00000518040 ROCK2O75116 1388 aaKnown RBP14.02□□□□□ -0.16
SH2D4A-202ENST00000518040 PALLDQ8WX93 1383 aa14.02□□□□□ -0.16
SH2D4A-202ENST00000518040 CD163L1Q9NR16 1453 aa14.02□□□□□ -0.16
SH2D4A-202ENST00000518040 C16orf71Q8IYS4 520 aaPredicted RBP14.02□□□□□ -0.16
SH2D4A-202ENST00000518040 SSFA2P28290 1259 aa14.01□□□□□ -0.17
SH2D4A-202ENST00000518040 FSTL1Q12841 308 aa14.01□□□□□ -0.17
SH2D4A-202ENST00000518040 TAF1LQ8IZX4 1826 aa14.01□□□□□ -0.17
SH2D4A-202ENST00000518040 MEGF6O75095 1541 aa14.01□□□□□ -0.17
SH2D4A-202ENST00000518040 AMPHP49418 695 aa14.01□□□□□ -0.17
SH2D4A-202ENST00000518040 TMC1Q8TDI8 760 aa14.01□□□□□ -0.17
SH2D4A-202ENST00000518040 RAPGEF4Q8WZA2 1011 aa14.01□□□□□ -0.17
SH2D4A-202ENST00000518040 C4BP0C0L5 1744 aa14□□□□□ -0.17
SH2D4A-202ENST00000518040 HOXC9P31274 260 aa14□□□□□ -0.17
SH2D4A-202ENST00000518040 TGFB2P61812 414 aa14□□□□□ -0.17
SH2D4A-202ENST00000518040 WWC3Q9ULE0 1092 aa14□□□□□ -0.17
SH2D4A-202ENST00000518040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.99□□□□□ -0.17
SH2D4A-202ENST00000518040 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
SH2D4A-202ENST00000518040 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
SH2D4A-202ENST00000518040 L3MBTL2Q969R5 705 aa13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 COG3Q96JB2 828 aa13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 RTL1A6NKG5 1358 aa13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 PLEKHG2Q9H7P9 1386 aa13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 PHF14O94880 888 aa13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 TATP17735 454 aaPredicted RBP13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 MAP3K19Q56UN5 1328 aa13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 PUS7Q96PZ0 661 aaKnown RBP13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 NMRK2Q9NPI5 230 aa13.98□□□□□ -0.17
SH2D4A-202ENST00000518040 UBR3Q6ZT12 1888 aa13.97□□□□□ -0.17
SH2D4A-202ENST00000518040 SMG6Q86US8 1419 aaKnown RBP13.97□□□□□ -0.17
SH2D4A-202ENST00000518040 SLC12A5Q9H2X9 1139 aa13.97□□□□□ -0.17
SH2D4A-202ENST00000518040 A0A1W2PP64 1363 aa13.96□□□□□ -0.17
SH2D4A-202ENST00000518040 ARHGAP27Q6ZUM4 889 aa13.96□□□□□ -0.17
SH2D4A-202ENST00000518040 BCS1LQ9Y276 419 aa13.96□□□□□ -0.17
SH2D4A-202ENST00000518040 PXDNLA1KZ92 1463 aa13.96□□□□□ -0.18
SH2D4A-202ENST00000518040 KDM2BQ8NHM5 1336 aa13.95□□□□□ -0.18
SH2D4A-202ENST00000518040 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms