RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 PPIP5K1Q6PFW1 1433 aa10.49□□□□□ -0.73
PVT1-206ENST00000517838 CDCA7Q9BWT1 371 aaPredicted RBP10.48□□□□□ -0.73
PVT1-206ENST00000517838 WDR17Q8IZU2 1322 aa10.48□□□□□ -0.73
PVT1-206ENST00000517838 BRD4O60885 1362 aaPredicted RBP10.48□□□□□ -0.73
PVT1-206ENST00000517838 PARP4Q9UKK3 1724 aaKnown RBP10.47□□□□□ -0.73
PVT1-206ENST00000517838 CASZ1Q86V15 1759 aa10.47□□□□□ -0.73
PVT1-206ENST00000517838 EXOC5O00471 708 aa10.47□□□□□ -0.73
PVT1-206ENST00000517838 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
PVT1-206ENST00000517838 ARHGEF25Q86VW2 580 aa10.47□□□□□ -0.73
PVT1-206ENST00000517838 ARXQ96QS3 562 aa10.47□□□□□ -0.73
PVT1-206ENST00000517838 CARD10Q9BWT7 1032 aa10.47□□□□□ -0.73
PVT1-206ENST00000517838 TIE1P35590 1138 aa10.46□□□□□ -0.73
PVT1-206ENST00000517838 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
PVT1-206ENST00000517838 MYOM1P52179 1685 aa10.45□□□□□ -0.74
PVT1-206ENST00000517838 USP6P35125 1406 aa10.45□□□□□ -0.74
PVT1-206ENST00000517838 NEUROD1Q13562 356 aa10.45□□□□□ -0.74
PVT1-206ENST00000517838 ZNF467Q7Z7K2 595 aaPredicted RBP10.45□□□□□ -0.74
PVT1-206ENST00000517838 BMP2KQ9NSY1 1161 aaPredicted RBP10.45□□□□□ -0.74
PVT1-206ENST00000517838 PCDHB8Q9UN66 801 aa10.45□□□□□ -0.74
PVT1-206ENST00000517838 ITSN1Q15811 1721 aa10.44□□□□□ -0.74
PVT1-206ENST00000517838 ARHGEF28Q8N1W1 1705 aaKnown RBP10.44□□□□□ -0.74
PVT1-206ENST00000517838 TOPAZ1Q8N9V7 1692 aa10.44□□□□□ -0.74
PVT1-206ENST00000517838 LRRC37A3O60309 1634 aa10.44□□□□□ -0.74
PVT1-206ENST00000517838 MAP3K5Q99683 1374 aa10.44□□□□□ -0.74
PVT1-206ENST00000517838 CENPJQ9HC77 1338 aaPredicted RBP10.44□□□□□ -0.74
PVT1-206ENST00000517838 ATMINO43313 823 aaPredicted RBP10.44□□□□□ -0.74
PVT1-206ENST00000517838 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
PVT1-206ENST00000517838 ACSBG1Q96GR2 724 aa10.44□□□□□ -0.74
PVT1-206ENST00000517838 SLIT3O75094 1523 aa10.43□□□□□ -0.74
PVT1-206ENST00000517838 SOX12O15370 315 aa10.43□□□□□ -0.74
PVT1-206ENST00000517838 GPR162Q16538 588 aa10.43□□□□□ -0.74
PVT1-206ENST00000517838 ZNF827Q17R98 1081 aa10.43□□□□□ -0.74
PVT1-206ENST00000517838 KCNH5Q8NCM2 988 aa10.43□□□□□ -0.74
PVT1-206ENST00000517838 LRRC4BQ9NT99 713 aa10.43□□□□□ -0.74
PVT1-206ENST00000517838 RGPD3A6NKT7 1758 aaPredicted RBP10.43□□□□□ -0.74
PVT1-206ENST00000517838 RGPD4Q7Z3J3 1758 aa10.43□□□□□ -0.74
PVT1-206ENST00000517838 GOLGB1Q14789 3259 aaKnown RBP10.43□□□□□ -0.74
PVT1-206ENST00000517838 CEP350Q5VT06 3117 aa10.42□□□□□ -0.74
PVT1-206ENST00000517838 CPSF1Q10570 1443 aaKnown RBP10.42□□□□□ -0.74
PVT1-206ENST00000517838 TTC21BQ7Z4L5 1316 aa10.42□□□□□ -0.74
PVT1-206ENST00000517838 TTLL13PA6NNM8 815 aa10.41□□□□□ -0.74
PVT1-206ENST00000517838 GIGYF1O75420 1035 aaPredicted RBP10.41□□□□□ -0.74
PVT1-206ENST00000517838 TONSLQ96HA7 1378 aa10.4□□□□□ -0.74
PVT1-206ENST00000517838 CCDC7Q96M83 1385 aa10.4□□□□□ -0.74
PVT1-206ENST00000517838 COL18A1P39060 1754 aa10.4□□□□□ -0.74
PVT1-206ENST00000517838 PELP1Q8IZL8 1130 aaKnown RBP10.4□□□□□ -0.74
PVT1-206ENST00000517838 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
PVT1-206ENST00000517838 ATN1P54259 1190 aaPredicted RBP10.39□□□□□ -0.75
PVT1-206ENST00000517838 SBF2Q86WG5 1849 aa10.39□□□□□ -0.75
PVT1-206ENST00000517838 TNS2Q63HR2 1409 aa10.39□□□□□ -0.75
PVT1-206ENST00000517838 NLGN2Q8NFZ4 835 aa10.38□□□□□ -0.75
PVT1-206ENST00000517838 SLC16A10Q8TF71 515 aa10.38□□□□□ -0.75
PVT1-206ENST00000517838 SIN3AQ96ST3 1273 aa10.38□□□□□ -0.75
PVT1-206ENST00000517838 NLRP2Q9NX02 1062 aa10.38□□□□□ -0.75
PVT1-206ENST00000517838 PNPLA7Q6ZV29 1317 aa10.37□□□□□ -0.75
PVT1-206ENST00000517838 IL2RBP14784 551 aa10.37□□□□□ -0.75
PVT1-206ENST00000517838 POLD1P28340 1107 aa10.37□□□□□ -0.75
PVT1-206ENST00000517838 ERBB3P21860 1342 aa10.36□□□□□ -0.75
PVT1-206ENST00000517838 EVC2Q86UK5 1308 aa10.36□□□□□ -0.75
PVT1-206ENST00000517838 TTC21AQ8NDW8 1320 aa10.36□□□□□ -0.75
PVT1-206ENST00000517838 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
PVT1-206ENST00000517838 YBX3P16989 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
PVT1-206ENST00000517838 KCNQ4P56696 695 aa10.36□□□□□ -0.75
PVT1-206ENST00000517838 TMEM106CQ9BVX2 250 aa10.36□□□□□ -0.75
PVT1-206ENST00000517838 PIK3C2AO00443 1686 aa10.36□□□□□ -0.75
PVT1-206ENST00000517838 PDAP1Q13442 181 aaKnown RBP10.35□□□□□ -0.75
PVT1-206ENST00000517838 SLC27A3Q5K4L6 730 aa10.35□□□□□ -0.75
PVT1-206ENST00000517838 TFCP2L1Q9NZI6 479 aa10.35□□□□□ -0.75
PVT1-206ENST00000517838 PAPPAQ13219 1627 aa10.35□□□□□ -0.75
PVT1-206ENST00000517838 NFAT5O94916 1531 aa10.34□□□□□ -0.75
PVT1-206ENST00000517838 RIOK3O14730 519 aaKnown RBP10.34□□□□□ -0.75
PVT1-206ENST00000517838 ANKRD24Q8TF21 1146 aa10.34□□□□□ -0.75
PVT1-206ENST00000517838 TIMELESSQ9UNS1 1208 aa10.34□□□□□ -0.75
PVT1-206ENST00000517838 KTN1Q86UP2 1357 aaKnown RBP10.34□□□□□ -0.75
PVT1-206ENST00000517838 TRPM1Q7Z4N2 1603 aa10.33□□□□□ -0.76
PVT1-206ENST00000517838 GRIN3BO60391 1043 aa10.33□□□□□ -0.76
PVT1-206ENST00000517838 PSEN1P49768 467 aa10.33□□□□□ -0.76
PVT1-206ENST00000517838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.33□□□□□ -0.761e-6■□□□□ 11.1
PVT1-206ENST00000517838 DDX54Q8TDD1 881 aaKnown RBP10.33□□□□□ -0.76
PVT1-206ENST00000517838 TRIM35Q9UPQ4 493 aa10.33□□□□□ -0.76
PVT1-206ENST00000517838 USP31Q70CQ4 1352 aa10.33□□□□□ -0.76
PVT1-206ENST00000517838 ABCC6O95255 1503 aa10.33□□□□□ -0.76
PVT1-206ENST00000517838 CENPBP07199 599 aaPredicted RBP10.32□□□□□ -0.76
PVT1-206ENST00000517838 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
PVT1-206ENST00000517838 NME9Q86XW9 330 aa10.32□□□□□ -0.76
PVT1-206ENST00000517838 L3MBTL2Q969R5 705 aa10.32□□□□□ -0.76
PVT1-206ENST00000517838 KIAA1210Q9ULL0 1709 aa10.32□□□□□ -0.76
PVT1-206ENST00000517838 NHSQ6T4R5 1651 aa10.31□□□□□ -0.76
PVT1-206ENST00000517838 COL23A1Q86Y22 540 aaPredicted RBP10.31□□□□□ -0.76
PVT1-206ENST00000517838 SLC39A7Q92504 469 aa10.31□□□□□ -0.76
PVT1-206ENST00000517838 RGL2O15211 777 aa10.3□□□□□ -0.76
PVT1-206ENST00000517838 SYTL4Q96C24 671 aaPredicted RBP10.3□□□□□ -0.76
PVT1-206ENST00000517838 WNK3Q9BYP7 1800 aa10.3□□□□□ -0.76
PVT1-206ENST00000517838 SHANK3Q9BYB0 1731 aa10.3□□□□□ -0.76
PVT1-206ENST00000517838 AKAP12Q02952 1782 aa10.29□□□□□ -0.76
PVT1-206ENST00000517838 SBNO2Q9Y2G9 1366 aa10.29□□□□□ -0.76
PVT1-206ENST00000517838 C7P10643 843 aa10.29□□□□□ -0.76
PVT1-206ENST00000517838 IP6K1Q92551 441 aa10.29□□□□□ -0.76
PVT1-206ENST00000517838 METRNQ9UJH8 293 aa10.29□□□□□ -0.76
PVT1-206ENST00000517838 ATP10DQ9P241 1426 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms