RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 RRS1Q15050 365 aaKnown RBP8.29□□□□□ -1.08
CDH12-203ENST00000517378 ANKRD44Q8N8A2 993 aa8.29□□□□□ -1.08
CDH12-203ENST00000517378 GBP4Q96PP9 640 aa8.29□□□□□ -1.08
CDH12-203ENST00000517378 ARHGEF10O15013 1369 aa8.29□□□□□ -1.08
CDH12-203ENST00000517378 ROBO2Q9HCK4 1378 aa8.29□□□□□ -1.08
CDH12-203ENST00000517378 FAM83GA6ND36 823 aa8.29□□□□□ -1.08
CDH12-203ENST00000517378 CD2BP2O95400 341 aaKnown RBP8.29□□□□□ -1.08
CDH12-203ENST00000517378 HSP90AB1P08238 724 aaKnown RBP8.29□□□□□ -1.08
CDH12-203ENST00000517378 HDGFP51858 240 aaKnown RBP8.29□□□□□ -1.08
CDH12-203ENST00000517378 EIF4A2Q14240 407 aaKnown RBP8.29□□□□□ -1.08
CDH12-203ENST00000517378 TTC22Q5TAA0 569 aa8.29□□□□□ -1.08
CDH12-203ENST00000517378 RTL1A6NKG5 1358 aa8.28□□□□□ -1.08
CDH12-203ENST00000517378 TNRQ92752 1358 aa8.28□□□□□ -1.08
CDH12-203ENST00000517378 TTC21BQ7Z4L5 1316 aa8.28□□□□□ -1.08
CDH12-203ENST00000517378 PLEKHG3A1L390 1219 aa8.28□□□□□ -1.08
CDH12-203ENST00000517378 SKOR2Q2VWA4 1001 aaPredicted RBP8.28□□□□□ -1.08
CDH12-203ENST00000517378 TXNDC2Q86VQ3 553 aa8.28□□□□□ -1.08
CDH12-203ENST00000517378 RPAP2Q8IXW5 612 aaPredicted RBP8.28□□□□□ -1.08
CDH12-203ENST00000517378 MSH6P52701 1360 aa8.28□□□□□ -1.08
CDH12-203ENST00000517378 IBTKQ9P2D0 1353 aaPredicted RBP8.28□□□□□ -1.08
CDH12-203ENST00000517378 PLEKHG1Q9ULL1 1385 aa8.28□□□□□ -1.08
CDH12-203ENST00000517378 RRAGDQ9NQL2 400 aaPredicted RBP8.28□□□□□ -1.08
CDH12-203ENST00000517378 NCKAP5LQ9HCH0 1330 aa8.27□□□□□ -1.09
CDH12-203ENST00000517378 XRN1Q8IZH2 1706 aaKnown RBP8.27□□□□□ -1.09
CDH12-203ENST00000517378 ELL2O00472 640 aaPredicted RBP8.27□□□□□ -1.09
CDH12-203ENST00000517378 CEP85Q6P2H3 762 aa8.27□□□□□ -1.09
CDH12-203ENST00000517378 KDRP35968 1356 aa8.27□□□□□ -1.09
CDH12-203ENST00000517378 RABEP1Q15276 862 aa8.27□□□□□ -1.09
CDH12-203ENST00000517378 GRPEL1Q9HAV7 217 aa8.27□□□□□ -1.09
CDH12-203ENST00000517378 MARF1Q9Y4F3 1742 aaKnown RBP8.27□□□□□ -1.09
CDH12-203ENST00000517378 CACNA1FO60840 1977 aa8.27□□□□□ -1.09
CDH12-203ENST00000517378 DCTN1Q14203 1278 aa8.26□□□□□ -1.09
CDH12-203ENST00000517378 PRKCSHP14314 528 aaPredicted RBP8.26□□□□□ -1.09
CDH12-203ENST00000517378 AEBP1Q8IUX7 1158 aa8.26□□□□□ -1.09
CDH12-203ENST00000517378 PANK2Q9BZ23 570 aa8.26□□□□□ -1.09
CDH12-203ENST00000517378 PIK3C2AO00443 1686 aa8.26□□□□□ -1.09
CDH12-203ENST00000517378 DIP2AQ14689 1571 aa8.26□□□□□ -1.09
CDH12-203ENST00000517378 SULT6B1Q6IMI4 303 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 GAS2L2Q8NHY3 880 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 USP26Q9BXU7 913 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 GZF1Q9H116 711 aaPredicted RBP8.25□□□□□ -1.09
CDH12-203ENST00000517378 PTPRUQ92729 1446 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 SLIT1O75093 1534 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 OSBPL3Q9H4L5 887 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 ACEP12821 1306 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 TTC21AQ8NDW8 1320 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
CDH12-203ENST00000517378 CLCN1P35523 988 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 CYB5RLQ6IPT4 315 aa8.25□□□□□ -1.09
CDH12-203ENST00000517378 SBNO1A3KN83 1393 aa8.24□□□□□ -1.09
CDH12-203ENST00000517378 PXDNLA1KZ92 1463 aa8.24□□□□□ -1.09
CDH12-203ENST00000517378 ADRA2BP18089 450 aa8.24□□□□□ -1.09
CDH12-203ENST00000517378 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
CDH12-203ENST00000517378 ARHGAP23Q9P227 1491 aa8.24□□□□□ -1.09
CDH12-203ENST00000517378 FLT4P35916 1363 aa8.24□□□□□ -1.09
CDH12-203ENST00000517378 NWD1Q149M9 1564 aa8.24□□□□□ -1.09
CDH12-203ENST00000517378 CEP170BQ9Y4F5 1589 aaPredicted RBP8.24□□□□□ -1.09
CDH12-203ENST00000517378 SDSP20132 328 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 KRT24Q2M2I5 525 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 MCM10Q7L590 875 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 RGPD8O14715 1765 aaPredicted RBP8.23□□□□□ -1.09
CDH12-203ENST00000517378 HSP90AA1P07900 732 aaKnown RBP8.23□□□□□ -1.09
CDH12-203ENST00000517378 SSFA2P28290 1259 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 KLHL40Q2TBA0 621 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 CASC1Q6TDU7 716 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 MEIS3Q99687 375 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 SOS1Q07889 1333 aaPredicted RBP8.23□□□□□ -1.09
CDH12-203ENST00000517378 MAP3K19Q56UN5 1328 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 IGSF1Q8N6C5 1336 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 SALL3Q9BXA9 1300 aa8.23□□□□□ -1.09
CDH12-203ENST00000517378 CCT4P50991 539 aaKnown RBP8.22□□□□□ -1.09
CDH12-203ENST00000517378 GAS2L3Q86XJ1 694 aa8.22□□□□□ -1.09
CDH12-203ENST00000517378 C16orf71Q8IYS4 520 aaPredicted RBP8.22□□□□□ -1.09
CDH12-203ENST00000517378 CWC22Q9HCG8 908 aaKnown RBP8.22□□□□□ -1.09
CDH12-203ENST00000517378 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.22□□□□□ -1.09
CDH12-203ENST00000517378 GOLGA6L22H0YM25 854 aa8.22□□□□□ -1.09
CDH12-203ENST00000517378 HMMRO75330 724 aa8.22□□□□□ -1.09
CDH12-203ENST00000517378 REC8O95072 547 aa8.22□□□□□ -1.09
CDH12-203ENST00000517378 BAG4O95429 457 aaKnown RBP8.22□□□□□ -1.09
CDH12-203ENST00000517378 NUCB2P80303 420 aa8.22□□□□□ -1.09
CDH12-203ENST00000517378 HSP90AB2PQ58FF8 381 aa8.22□□□□□ -1.09
CDH12-203ENST00000517378 OTUD7AQ8TE49 926 aaPredicted RBP8.22□□□□□ -1.09
CDH12-203ENST00000517378 AK9Q5TCS8 1911 aa8.21□□□□□ -1.09
CDH12-203ENST00000517378 HTATSF1O43719 755 aaKnown RBP8.21□□□□□ -1.09
CDH12-203ENST00000517378 MLECQ14165 292 aa8.21□□□□□ -1.09
CDH12-203ENST00000517378 IL17RAQ96F46 866 aa8.21□□□□□ -1.09
CDH12-203ENST00000517378 ANKARQ7Z5J8 1434 aa8.21□□□□□ -1.1
CDH12-203ENST00000517378 SLC4A2P04920 1241 aa8.21□□□□□ -1.1
CDH12-203ENST00000517378 MED1Q15648 1581 aaPredicted RBP8.2□□□□□ -1.1
CDH12-203ENST00000517378 ERC2O15083 957 aa8.2□□□□□ -1.1
CDH12-203ENST00000517378 ST18O60284 1047 aa8.2□□□□□ -1.1
CDH12-203ENST00000517378 ZNF445P59923 1031 aa8.2□□□□□ -1.1
CDH12-203ENST00000517378 MTHFSDQ2M296 383 aaKnown RBP8.2□□□□□ -1.1
CDH12-203ENST00000517378 ESF1Q9H501 851 aaKnown RBP8.2□□□□□ -1.1
CDH12-203ENST00000517378 CRYBG1Q9Y4K1 1723 aa8.2□□□□□ -1.1
CDH12-203ENST00000517378 PDE1AP54750 535 aa8.2□□□□□ -1.1
CDH12-203ENST00000517378 PPP1R9BQ96SB3 815 aa8.2□□□□□ -1.1
CDH12-203ENST00000517378 BABAM1Q9NWV8 329 aa8.2□□□□□ -1.1
CDH12-203ENST00000517378 SMARCA5O60264 1052 aaPredicted RBP8.19□□□□□ -1.1
CDH12-203ENST00000517378 ARXQ96QS3 562 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms