RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 USP17L22D6RA61 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L17D6RBQ6 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L19D6RCP7 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L20D6RJB6 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 M0R2N6 131 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ERVH48-1M5A8F1 160 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 BRD1O95696 1058 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ALDH1A1P00352 501 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 FSHRP23945 695 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 SEC13P55735 322 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 GTF2IP78347 998 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 USP17L24Q0WX57 530 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 OXLD1Q5BKU9 147 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ESCO1Q5FWF5 840 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 CYP2U1Q7Z449 544 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ANKMY2Q8IV38 441 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 SIX5Q8N196 739 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 DEPDC4Q8N2C3 294 aa3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 EMID1Q96A84 441 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 NOVA2Q9UNW9 492 aaKnown RBP3.54□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ZBTB7CA1YPR0 619 aa3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 WASLO00401 505 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 BACH1O14867 736 aa3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 GDF9O60383 454 aa3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 GNRH1P01148 92 aa3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PSME1Q06323 249 aa3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 FOXC1Q12948 553 aa3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 CRTC2Q53ET0 693 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PPP1R26Q5T8A7 1209 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 CCDC102BQ68D86 513 aa3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PKD2L1Q9P0L9 805 aa3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 PCDHGA11Q9Y5H2 935 aa3.53□□□□□ -1.84
RNU6-1041P-201ENST00000516254 ZBTB7BO15156 539 aaPredicted RBP3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 RAB15P59190 212 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 CLDN10P78369 228 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 KCNA1Q09470 495 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 NNTQ13423 1086 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TSGA10IPQ3SY00 556 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 CDCA8Q53HL2 280 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 GAS2L2Q8NHY3 880 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 CLP1Q92989 425 aaKnown RBP3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TOR4AQ9NXH8 423 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 MTMR7Q9Y216 660 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TLL2Q9Y6L7 1015 aa3.52□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TMEM88BA6NKF7 163 aa3.51□□□□□ -1.85
RNU6-1041P-201ENST00000516254 DPYDQ12882 1025 aa3.51□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TMEM164Q5U3C3 297 aa3.51□□□□□ -1.85
RNU6-1041P-201ENST00000516254 ZNF784Q8NCA9 323 aaPredicted RBP3.51□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TPCN2Q8NHX9 752 aa3.51□□□□□ -1.85
RNU6-1041P-201ENST00000516254 C1orf216Q8TAB5 229 aa3.51□□□□□ -1.85
RNU6-1041P-201ENST00000516254 ZMIZ1Q9ULJ6 1067 aa3.51□□□□□ -1.85
RNU6-1041P-201ENST00000516254 LILRA1O75019 489 aa3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 UPP2O95045 317 aa3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 INHAP05111 366 aa3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 ADH1AP07327 375 aa3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 WDR4P57081 412 aaKnown RBP3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 LAPTM4AQ15012 233 aa3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 Q6ZVU0 165 aa3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 ZNF594Q96JF6 807 aaPredicted RBP3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 SLC4A9Q96Q91 983 aa3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 OSBPL3Q9H4L5 887 aa3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 CYLDQ9NQC7 956 aa3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.5□□□□□ -1.85
RNU6-1041P-201ENST00000516254 DKK1O94907 266 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 NR3C2P08235 984 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 GTF2E1P29083 439 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 ARID4AP29374 1257 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 SCTRP47872 440 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 GDF10P55107 478 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 FAM69CQ0P6D2 419 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 NBPF15Q8N660 670 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 CCER1Q8TC90 406 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 STK32AQ8WU08 396 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 XAGE2Q96GT9 111 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 HINFPQ9BQA5 517 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TSEN34Q9BSV6 310 aaKnown RBP3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 KLF16Q9BXK1 252 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TMPRSS4Q9NRS4 437 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 PDZRN3Q9UPQ7 1066 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 CHMP3Q9Y3E7 222 aa3.49□□□□□ -1.85
RNU6-1041P-201ENST00000516254 J3QL48 77 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TNFRSF10AO00220 468 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 CDK2AP1O14519 115 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 PTCD1O75127 700 aaKnown RBP3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 ZIC2O95409 532 aaPredicted RBP3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 TIMP2P16035 220 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 SMPD1P17405 629 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 IGFBP4P22692 258 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 ATP2B4P23634 1241 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 SSFA2P28290 1259 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 GPC1P35052 558 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 ADD1P35611 737 aaKnown RBP3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 PTGIRP43119 386 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 CLN3Q13286 438 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 CTC1Q2NKJ3 1217 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 AEBP1Q8IUX7 1158 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 STAG2Q8N3U4 1231 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 COL26A1Q96A83 441 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 ITPKCQ96DU7 683 aa3.48□□□□□ -1.85
RNU6-1041P-201ENST00000516254 NLRP3Q96P20 1036 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms