RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 SSBP4Q9BWG4 385 aaPredicted RBP1.72□□□□□ -2.13
SCARNA21.1-201ENST00000515996 UNC93B1Q9H1C4 597 aa1.72□□□□□ -2.13
SCARNA21.1-201ENST00000515996 LMCD1Q9NZU5 365 aa1.72□□□□□ -2.13
SCARNA21.1-201ENST00000515996 EMILIN1Q9Y6C2 1016 aa1.72□□□□□ -2.13
SCARNA21.1-201ENST00000515996 RHOQP17081 205 aa1.71□□□□□ -2.14
SCARNA21.1-201ENST00000515996 RELBQ01201 579 aa1.71□□□□□ -2.14
SCARNA21.1-201ENST00000515996 NRG1Q02297 640 aaPredicted RBP1.71□□□□□ -2.14
SCARNA21.1-201ENST00000515996 FOXD4L5Q5VV16 416 aaPredicted RBP1.71□□□□□ -2.14
SCARNA21.1-201ENST00000515996 LCNL1Q6ZST4 164 aa1.71□□□□□ -2.14
SCARNA21.1-201ENST00000515996 AGBL1Q96MI9 1066 aa1.71□□□□□ -2.14
SCARNA21.1-201ENST00000515996 ACSS3Q9H6R3 686 aa1.71□□□□□ -2.14
SCARNA21.1-201ENST00000515996 SPINK2P20155 84 aa1.7□□□□□ -2.14
SCARNA21.1-201ENST00000515996 GCGRP47871 477 aa1.7□□□□□ -2.14
SCARNA21.1-201ENST00000515996 KRTAP10-2P60368 255 aa1.7□□□□□ -2.14
SCARNA21.1-201ENST00000515996 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
SCARNA21.1-201ENST00000515996 LYSMD3Q7Z3D4 306 aa1.7□□□□□ -2.14
SCARNA21.1-201ENST00000515996 ABI1Q8IZP0 508 aa1.7□□□□□ -2.14
SCARNA21.1-201ENST00000515996 NEURL1BA8MQ27 555 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 C9orf172C9J069 976 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 C2CD2LO14523 706 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 CCNYL3P0C7X3 344 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 BMP4P12644 408 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 FSTP19883 344 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 CTSWP56202 376 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 GRIPAP1Q4V328 841 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 KRTAP5-4Q6L8H1 288 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 CFHR5Q9BXR6 569 aa1.69□□□□□ -2.14
SCARNA21.1-201ENST00000515996 SPDYE16A6NNV3 312 aaPredicted RBP1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 WNT11O96014 354 aa1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 TGFB1P01137 390 aa1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 ITGB5P18084 799 aa1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 PRICKLE2Q7Z3G6 844 aa1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 CILP2Q8IUL8 1156 aa1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 CCDC116Q8IYX3 515 aa1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 GAS2L1Q99501 681 aaPredicted RBP1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 NUCKS1Q9H1E3 243 aaKnown RBP1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 ZNF395Q9H8N7 513 aaPredicted RBP1.68□□□□□ -2.14
SCARNA21.1-201ENST00000515996 DDX11L8A8MPP1 907 aa1.67□□□□□ -2.14
SCARNA21.1-201ENST00000515996 SELPP16109 830 aa1.67□□□□□ -2.14
SCARNA21.1-201ENST00000515996 JUNBP17275 347 aaPredicted RBP1.67□□□□□ -2.14
SCARNA21.1-201ENST00000515996 TRIM28Q13263 835 aaKnown RBP1.67□□□□□ -2.14
SCARNA21.1-201ENST00000515996 PAXIP1Q6ZW49 1069 aaPredicted RBP1.67□□□□□ -2.14
SCARNA21.1-201ENST00000515996 FOXJ1Q92949 421 aa1.67□□□□□ -2.14
SCARNA21.1-201ENST00000515996 MYRFLQ96LU7 910 aa1.67□□□□□ -2.14
SCARNA21.1-201ENST00000515996 DYRK1BQ9Y463 629 aa1.67□□□□□ -2.14
SCARNA21.1-201ENST00000515996 FARP2O94887 1054 aaPredicted RBP1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 THBS1P07996 1170 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 INHBBP09529 407 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 ARAFP10398 606 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 CFPP27918 469 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 KRTAP10-7P60409 375 aaPredicted RBP1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 PPP1R26Q5T8A7 1209 aaPredicted RBP1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 PRR23CQ6ZRP0 262 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 CBLL1Q75N03 491 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 SLC51AQ86UW1 340 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 DTX1Q86Y01 620 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 C1QL4Q86Z23 238 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 KSR1Q8IVT5 923 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 CRELD1Q96HD1 420 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 PHF24Q9UPV7 400 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 KDM2AQ9Y2K7 1162 aa1.66□□□□□ -2.14
SCARNA21.1-201ENST00000515996 RGL2O15211 777 aa1.65□□□□□ -2.15
SCARNA21.1-201ENST00000515996 GSC2O15499 205 aa1.65□□□□□ -2.15
SCARNA21.1-201ENST00000515996 ZSCAN22P10073 491 aaPredicted RBP1.65□□□□□ -2.15
SCARNA21.1-201ENST00000515996 ECM1Q16610 540 aa1.65□□□□□ -2.15
SCARNA21.1-201ENST00000515996 TOX2Q96NM4 488 aa1.65□□□□□ -2.15
SCARNA21.1-201ENST00000515996 PGPEP1Q9NXJ5 209 aa1.65□□□□□ -2.15
SCARNA21.1-201ENST00000515996 C4orf48Q5BLP8 95 aa1.64□□□□□ -2.15
SCARNA21.1-201ENST00000515996 SHISA2Q6UWI4 295 aa1.64□□□□□ -2.15
SCARNA21.1-201ENST00000515996 FCHSD1Q86WN1 690 aa1.64□□□□□ -2.15
SCARNA21.1-201ENST00000515996 SIAH1Q8IUQ4 282 aa1.64□□□□□ -2.15
SCARNA21.1-201ENST00000515996 LRRC56Q8IYG6 542 aaPredicted RBP1.64□□□□□ -2.15
SCARNA21.1-201ENST00000515996 PXYLP1Q8TE99 480 aa1.64□□□□□ -2.15
SCARNA21.1-201ENST00000515996 LENG1Q96BZ8 264 aaPredicted RBP1.64□□□□□ -2.15
SCARNA21.1-201ENST00000515996 MS4A1P11836 297 aa1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 KRTAP10-9P60411 292 aa1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 CTBSQ01459 385 aa1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 KCNH2Q12809 1159 aa1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 VASH1Q7L8A9 365 aaPredicted RBP1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 ZSCAN18Q8TBC5 510 aaPredicted RBP1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 HLA-CQ95604 372 aa1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 RYDENQ9NUL5 291 aaKnown RBP1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 EVA1BQ9NVM1 165 aa1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 MAP4K5Q9Y4K4 846 aa1.63□□□□□ -2.15
SCARNA21.1-201ENST00000515996 FGFR3P22607 806 aa1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 ADH6P28332 368 aa1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 GRIK1P39086 918 aa1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 HNRNPA0Q13151 305 aaKnown RBP1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 PTGDRQ13258 359 aa1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 NKX1-1Q15270 411 aaPredicted RBP1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 PTPRNQ16849 979 aa1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 INTS5Q6P9B9 1019 aaKnown RBP1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 SYMPKQ92797 1274 aaKnown RBP1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 RELTQ969Z4 430 aa1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 NAF1Q96HR8 494 aaKnown RBP1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.62□□□□□ -2.15
SCARNA21.1-201ENST00000515996 ECM2O94769 699 aaPredicted RBP1.61□□□□□ -2.15
SCARNA21.1-201ENST00000515996 NFKB2Q00653 900 aa1.61□□□□□ -2.15
SCARNA21.1-201ENST00000515996 AGERQ15109 404 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms