RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 CCDC7Q96M83 1385 aa13.19□□□□□ -0.3
CSNK1A1-206ENST00000515748 BTAF1O14981 1849 aa13.18□□□□□ -0.3
CSNK1A1-206ENST00000515748 EVC2Q86UK5 1308 aa13.17□□□□□ -0.3
CSNK1A1-206ENST00000515748 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
CSNK1A1-206ENST00000515748 TESK2Q96S53 571 aa13.17□□□□□ -0.3
CSNK1A1-206ENST00000515748 PPIP5K1Q6PFW1 1433 aa13.16□□□□□ -0.3
CSNK1A1-206ENST00000515748 IL2RBP14784 551 aa13.16□□□□□ -0.3
CSNK1A1-206ENST00000515748 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
CSNK1A1-206ENST00000515748 ARHGAP27Q6ZUM4 889 aa13.16□□□□□ -0.3
CSNK1A1-206ENST00000515748 PUS7Q96PZ0 661 aaKnown RBP13.16□□□□□ -0.3
CSNK1A1-206ENST00000515748 RRAGCQ9HB90 399 aa13.16□□□□□ -0.3
CSNK1A1-206ENST00000515748 CCNL1Q9UK58 526 aaPredicted RBP13.16□□□□□ -0.3
CSNK1A1-206ENST00000515748 COL18A1P39060 1754 aa13.16□□□□□ -0.3
CSNK1A1-206ENST00000515748 SMC1BQ8NDV3 1235 aa13.15□□□□□ -0.3
CSNK1A1-206ENST00000515748 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.3
CSNK1A1-206ENST00000515748 SYTL4Q96C24 671 aaPredicted RBP13.15□□□□□ -0.3
CSNK1A1-206ENST00000515748 WNK3Q9BYP7 1800 aa13.15□□□□□ -0.3
CSNK1A1-206ENST00000515748 ITSN1Q15811 1721 aa13.14□□□□□ -0.31
CSNK1A1-206ENST00000515748 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
CSNK1A1-206ENST00000515748 DDX54Q8TDD1 881 aaKnown RBP13.14□□□□□ -0.31
CSNK1A1-206ENST00000515748 PRDM10Q9NQV6 1147 aa13.14□□□□□ -0.31
CSNK1A1-206ENST00000515748 NLRP2Q9NX02 1062 aa13.14□□□□□ -0.31
CSNK1A1-206ENST00000515748 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
CSNK1A1-206ENST00000515748 MLLT1Q03111 559 aaPredicted RBP13.13□□□□□ -0.31
CSNK1A1-206ENST00000515748 KCNH5Q8NCM2 988 aa13.13□□□□□ -0.31
CSNK1A1-206ENST00000515748 CPSF1Q10570 1443 aaKnown RBP13.13□□□□□ -0.31
CSNK1A1-206ENST00000515748 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
CSNK1A1-206ENST00000515748 SOX12O15370 315 aa13.12□□□□□ -0.31
CSNK1A1-206ENST00000515748 SRPK2P78362 688 aaKnown RBP13.12□□□□□ -0.31
CSNK1A1-206ENST00000515748 C9orf131Q5VYM1 1079 aa13.12□□□□□ -0.31
CSNK1A1-206ENST00000515748 FOXN1O15353 648 aa13.11□□□□□ -0.31
CSNK1A1-206ENST00000515748 CABP2Q9NPB3 220 aa13.11□□□□□ -0.31
CSNK1A1-206ENST00000515748 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
CSNK1A1-206ENST00000515748 SLIT3O75094 1523 aa13.11□□□□□ -0.31
CSNK1A1-206ENST00000515748 ABCC6O95255 1503 aa13.11□□□□□ -0.31
CSNK1A1-206ENST00000515748 ABHD8Q96I13 439 aa13.1□□□□□ -0.31
CSNK1A1-206ENST00000515748 RGS19P49795 217 aa13.09□□□□□ -0.31
CSNK1A1-206ENST00000515748 A0A0G2JLW4 131 aa13.08□□□□□ -0.32
CSNK1A1-206ENST00000515748 EIF4G2P78344 907 aaKnown RBP eCLIP13.08□□□□□ -0.32
CSNK1A1-206ENST00000515748 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
CSNK1A1-206ENST00000515748 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
CSNK1A1-206ENST00000515748 CICQ96RK0 1608 aaPredicted RBP13.08□□□□□ -0.32
CSNK1A1-206ENST00000515748 TGFB2P61812 414 aa13.07□□□□□ -0.32
CSNK1A1-206ENST00000515748 TMF1P82094 1093 aa13.07□□□□□ -0.32
CSNK1A1-206ENST00000515748 RGPD5Q99666 1765 aa13.07□□□□□ -0.32
CSNK1A1-206ENST00000515748 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
CSNK1A1-206ENST00000515748 HMGB2P26583 209 aaKnown RBP13.06□□□□□ -0.32
CSNK1A1-206ENST00000515748 CTCFP49711 727 aaPredicted RBP13.06□□□□□ -0.32
CSNK1A1-206ENST00000515748 CDCA8Q53HL2 280 aa13.06□□□□□ -0.32
CSNK1A1-206ENST00000515748 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
CSNK1A1-206ENST00000515748 C10orf71Q711Q0 1435 aa13.05□□□□□ -0.32
CSNK1A1-206ENST00000515748 CD163L1Q9NR16 1453 aa13.05□□□□□ -0.32
CSNK1A1-206ENST00000515748 FCHSD2O94868 740 aa13.05□□□□□ -0.32
CSNK1A1-206ENST00000515748 ERBB3P21860 1342 aa13.05□□□□□ -0.32
CSNK1A1-206ENST00000515748 NSD2O96028 1365 aa13.05□□□□□ -0.32
CSNK1A1-206ENST00000515748 PLEKHG2Q9H7P9 1386 aa13.05□□□□□ -0.32
CSNK1A1-206ENST00000515748 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
CSNK1A1-206ENST00000515748 AMIGO3Q86WK7 504 aa13.04□□□□□ -0.32
CSNK1A1-206ENST00000515748 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
CSNK1A1-206ENST00000515748 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
CSNK1A1-206ENST00000515748 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
CSNK1A1-206ENST00000515748 CCDC85CA6NKD9 419 aa13.02□□□□□ -0.33
CSNK1A1-206ENST00000515748 PHF14O94880 888 aa13.02□□□□□ -0.33
CSNK1A1-206ENST00000515748 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.33
CSNK1A1-206ENST00000515748 LBX1P52954 281 aa13.02□□□□□ -0.33
CSNK1A1-206ENST00000515748 ANKRD24Q8TF21 1146 aa13.02□□□□□ -0.33
CSNK1A1-206ENST00000515748 AIDAQ96BJ3 306 aa13.02□□□□□ -0.33
CSNK1A1-206ENST00000515748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
CSNK1A1-206ENST00000515748 DPEP1P16444 411 aa13.01□□□□□ -0.33
CSNK1A1-206ENST00000515748 AK7Q96M32 723 aa13.01□□□□□ -0.33
CSNK1A1-206ENST00000515748 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
CSNK1A1-206ENST00000515748 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
CSNK1A1-206ENST00000515748 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
CSNK1A1-206ENST00000515748 LY75O60449 1722 aa13.01□□□□□ -0.33
CSNK1A1-206ENST00000515748 EDC4Q6P2E9 1401 aaKnown RBP13□□□□□ -0.33
CSNK1A1-206ENST00000515748 CREBZFQ9NS37 354 aa13□□□□□ -0.33
CSNK1A1-206ENST00000515748 TERF2IPQ9NYB0 399 aa13□□□□□ -0.33
CSNK1A1-206ENST00000515748 KTN1Q86UP2 1357 aaKnown RBP12.99□□□□□ -0.33
CSNK1A1-206ENST00000515748 TTC21AQ8NDW8 1320 aa12.99□□□□□ -0.33
CSNK1A1-206ENST00000515748 MMP10P09238 476 aa12.99□□□□□ -0.33
CSNK1A1-206ENST00000515748 SLC12A5Q9H2X9 1139 aa12.99□□□□□ -0.33
CSNK1A1-206ENST00000515748 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
CSNK1A1-206ENST00000515748 KCNA3P22001 575 aa12.98□□□□□ -0.33
CSNK1A1-206ENST00000515748 HDGFL2Q7Z4V5 671 aaPredicted RBP12.98□□□□□ -0.33
CSNK1A1-206ENST00000515748 ZCRB1Q8TBF4 217 aaKnown RBP12.98□□□□□ -0.33
CSNK1A1-206ENST00000515748 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
CSNK1A1-206ENST00000515748 TMC1Q8TDI8 760 aa12.97□□□□□ -0.33
CSNK1A1-206ENST00000515748 WBP1LQ9NX94 342 aa12.97□□□□□ -0.33
CSNK1A1-206ENST00000515748 USP31Q70CQ4 1352 aa12.96□□□□□ -0.33
CSNK1A1-206ENST00000515748 SSFA2P28290 1259 aa12.96□□□□□ -0.33
CSNK1A1-206ENST00000515748 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
CSNK1A1-206ENST00000515748 USP54Q70EL1 1684 aa12.96□□□□□ -0.34
CSNK1A1-206ENST00000515748 GLTPD2A6NH11 291 aa12.95□□□□□ -0.34
CSNK1A1-206ENST00000515748 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
CSNK1A1-206ENST00000515748 PIM2Q9P1W9 311 aa12.95□□□□□ -0.34
CSNK1A1-206ENST00000515748 NFAT5O94916 1531 aa12.94□□□□□ -0.34
CSNK1A1-206ENST00000515748 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
CSNK1A1-206ENST00000515748 POTECB2RU33 542 aa12.93□□□□□ -0.34
CSNK1A1-206ENST00000515748 HSPA8P11142 646 aaKnown RBP12.93□□□□□ -0.34
CSNK1A1-206ENST00000515748 VEGFBP49765 207 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms