RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 ZNF76P36508 570 aa17.19■□□□□ 0.34
TRIO-222ENST00000515144 CDC45O75419 566 aa17.19■□□□□ 0.34
TRIO-222ENST00000515144 POLR3DP05423 398 aaPredicted RBP17.19■□□□□ 0.34
TRIO-222ENST00000515144 TRMT112Q9UI30 125 aaKnown RBP17.19■□□□□ 0.34
TRIO-222ENST00000515144 TOM1O60784 492 aa17.19■□□□□ 0.34
TRIO-222ENST00000515144 CCDC73Q6ZRK6 1079 aa17.19■□□□□ 0.34
TRIO-222ENST00000515144 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
TRIO-222ENST00000515144 NEK4P51957 841 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 DUSP27Q5VZP5 1158 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 FMNL2Q96PY5 1086 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 ATAD2Q6PL18 1390 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 AKNAQ7Z591 1439 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 NUTM1Q86Y26 1132 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 ZBTB3Q9H5J0 574 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 OFD1O75665 1012 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 TRMT1LQ7Z2T5 733 aaKnown RBP17.18■□□□□ 0.34
TRIO-222ENST00000515144 CAVIN4Q5BKX8 364 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 DZIP1Q86YF9 867 aaKnown RBP17.18■□□□□ 0.34
TRIO-222ENST00000515144 SDF4Q9BRK5 362 aa17.18■□□□□ 0.34
TRIO-222ENST00000515144 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.18■□□□□ 0.34
TRIO-222ENST00000515144 ADGRF5Q8IZF2 1346 aa17.17■□□□□ 0.34
TRIO-222ENST00000515144 OLFM4Q6UX06 510 aa17.17■□□□□ 0.34
TRIO-222ENST00000515144 NAIPQ13075 1403 aa17.17■□□□□ 0.34
TRIO-222ENST00000515144 TSHZ2Q9NRE2 1034 aa17.17■□□□□ 0.34
TRIO-222ENST00000515144 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
TRIO-222ENST00000515144 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
TRIO-222ENST00000515144 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
TRIO-222ENST00000515144 PIP4K2AP48426 406 aaPredicted RBP17.16■□□□□ 0.34
TRIO-222ENST00000515144 RPGRIP1LQ68CZ1 1315 aa17.16■□□□□ 0.34
TRIO-222ENST00000515144 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
TRIO-222ENST00000515144 SSBP05455 408 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRIO-222ENST00000515144 TMPOP42166 694 aaKnown RBP17.15■□□□□ 0.34
TRIO-222ENST00000515144 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
TRIO-222ENST00000515144 ATP5J2-PTCD1G3V325 749 aa17.15■□□□□ 0.34
TRIO-222ENST00000515144 WASLO00401 505 aaPredicted RBP17.15■□□□□ 0.34
TRIO-222ENST00000515144 SKIDA1Q1XH10 827 aa17.15■□□□□ 0.34
TRIO-222ENST00000515144 NOS1P29475 1434 aa17.15■□□□□ 0.34
TRIO-222ENST00000515144 F6X3S4 739 aa17.15■□□□□ 0.34
TRIO-222ENST00000515144 HIP1O00291 1037 aa17.15■□□□□ 0.34
TRIO-222ENST00000515144 CLEC11AQ9Y240 323 aa17.15■□□□□ 0.34
TRIO-222ENST00000515144 EXOC6BQ9Y2D4 811 aa17.15■□□□□ 0.34
TRIO-222ENST00000515144 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
TRIO-222ENST00000515144 SMARCA5O60264 1052 aaPredicted RBP17.14■□□□□ 0.33
TRIO-222ENST00000515144 SOGA3Q5TF21 947 aa17.14■□□□□ 0.33
TRIO-222ENST00000515144 MKNK2Q9HBH9 465 aa17.14■□□□□ 0.33
TRIO-222ENST00000515144 LMTK3Q96Q04 1460 aa17.13■□□□□ 0.33
TRIO-222ENST00000515144 TXLNAP40222 546 aa17.13■□□□□ 0.33
TRIO-222ENST00000515144 NFE2L2Q16236 605 aa17.13■□□□□ 0.33
TRIO-222ENST00000515144 UBAC1Q9BSL1 405 aa17.13■□□□□ 0.33
TRIO-222ENST00000515144 AIDAQ96BJ3 306 aa17.13■□□□□ 0.33
TRIO-222ENST00000515144 CCDC70Q6NSX1 233 aa17.13■□□□□ 0.33
TRIO-222ENST00000515144 ANKRD24Q8TF21 1146 aa17.13■□□□□ 0.33
TRIO-222ENST00000515144 BOLA2Q9H3K6 86 aa17.13■□□□□ 0.33
TRIO-222ENST00000515144 ASXL2Q76L83 1435 aa17.12■□□□□ 0.33
TRIO-222ENST00000515144 ATP6V1AP38606 617 aa17.12■□□□□ 0.33
TRIO-222ENST00000515144 TAF7Q15545 349 aaPredicted RBP17.12■□□□□ 0.33
TRIO-222ENST00000515144 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
TRIO-222ENST00000515144 F8W031 263 aaPredicted RBP17.11■□□□□ 0.33
TRIO-222ENST00000515144 IFIT5Q13325 482 aaKnown RBP17.11■□□□□ 0.33
TRIO-222ENST00000515144 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
TRIO-222ENST00000515144 ABCC5O15440 1437 aa17.11■□□□□ 0.33
TRIO-222ENST00000515144 ZSCAN25Q6NSZ9 544 aa17.11■□□□□ 0.33
TRIO-222ENST00000515144 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
TRIO-222ENST00000515144 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
TRIO-222ENST00000515144 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
TRIO-222ENST00000515144 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
TRIO-222ENST00000515144 ACEP12821 1306 aa17.1■□□□□ 0.33
TRIO-222ENST00000515144 TNRQ92752 1358 aa17.1■□□□□ 0.33
TRIO-222ENST00000515144 TRIM22Q8IYM9 498 aa17.09■□□□□ 0.33
TRIO-222ENST00000515144 SYCP1Q15431 976 aa17.09■□□□□ 0.33
TRIO-222ENST00000515144 FIBPO43427 364 aa17.09■□□□□ 0.33
TRIO-222ENST00000515144 ST5P78524 1137 aa17.08■□□□□ 0.33
TRIO-222ENST00000515144 RNF214Q8ND24 703 aa17.08■□□□□ 0.33
TRIO-222ENST00000515144 SCLT1Q96NL6 688 aa17.08■□□□□ 0.33
TRIO-222ENST00000515144 MAGEC2Q9UBF1 373 aaPredicted RBP17.08■□□□□ 0.33
TRIO-222ENST00000515144 CCDC96Q2M329 555 aa17.08■□□□□ 0.33
TRIO-222ENST00000515144 ANXA1P04083 346 aa17.08■□□□□ 0.32
TRIO-222ENST00000515144 CCDC8Q9H0W5 538 aaPredicted RBP17.08■□□□□ 0.32
TRIO-222ENST00000515144 MAP3K2Q9Y2U5 619 aa17.08■□□□□ 0.32
TRIO-222ENST00000515144 FCHSD2O94868 740 aa17.08■□□□□ 0.32
TRIO-222ENST00000515144 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
TRIO-222ENST00000515144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.08■□□□□ 0.321e-7■■■□□ 17.2
TRIO-222ENST00000515144 SMC2O95347 1197 aa17.08■□□□□ 0.32
TRIO-222ENST00000515144 CCDC184Q52MB2 194 aa17.08■□□□□ 0.32
TRIO-222ENST00000515144 FAM83GA6ND36 823 aa17.07■□□□□ 0.32
TRIO-222ENST00000515144 TANGO6Q9C0B7 1094 aa17.07■□□□□ 0.32
TRIO-222ENST00000515144 AMOTQ4VCS5 1084 aa17.07■□□□□ 0.32
TRIO-222ENST00000515144 CYP46A1Q9Y6A2 500 aa17.07■□□□□ 0.32
TRIO-222ENST00000515144 SYCP2Q9BX26 1530 aa17.07■□□□□ 0.32
TRIO-222ENST00000515144 RANBP6O60518 1105 aaKnown RBP17.06■□□□□ 0.32
TRIO-222ENST00000515144 SKOR2Q2VWA4 1001 aaPredicted RBP17.06■□□□□ 0.32
TRIO-222ENST00000515144 BIVM-ERCC5R4GMW8 1640 aa17.06■□□□□ 0.32
TRIO-222ENST00000515144 IFIT1P09914 478 aaKnown RBP17.06■□□□□ 0.32
TRIO-222ENST00000515144 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
TRIO-222ENST00000515144 LARP1Q6PKG0 1096 aaKnown RBP17.06■□□□□ 0.32
TRIO-222ENST00000515144 DDX46Q7L014 1031 aaKnown RBP17.06■□□□□ 0.32
TRIO-222ENST00000515144 KDM5BQ9UGL1 1544 aa17.06■□□□□ 0.32
TRIO-222ENST00000515144 A0A087WZG4 1122 aa17.06■□□□□ 0.32
TRIO-222ENST00000515144 STK38Q15208 465 aa17.06■□□□□ 0.32
TRIO-222ENST00000515144 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms