RNA–Protein interactions for RNA: ENST00000515070.1

ABCC3-215, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-215ENST00000515070 PCDH11YQ9BZA8 1340 aa11.8□□□□□ -0.52
ABCC3-215ENST00000515070 CNGB1Q14028 1251 aaPredicted RBP11.79□□□□□ -0.52
ABCC3-215ENST00000515070 USHBP1Q8N6Y0 703 aa11.79□□□□□ -0.52
ABCC3-215ENST00000515070 KDRP35968 1356 aa11.79□□□□□ -0.52
ABCC3-215ENST00000515070 TRIM37O94972 964 aa11.78□□□□□ -0.52
ABCC3-215ENST00000515070 HMGB2P26583 209 aaKnown RBP11.78□□□□□ -0.52
ABCC3-215ENST00000515070 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
ABCC3-215ENST00000515070 FAM182BQ5T319 152 aa11.78□□□□□ -0.52
ABCC3-215ENST00000515070 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
ABCC3-215ENST00000515070 BRWD3Q6RI45 1802 aa11.78□□□□□ -0.52
ABCC3-215ENST00000515070 PLSCR1O15162 318 aa11.77□□□□□ -0.53
ABCC3-215ENST00000515070 HSP90AB1P08238 724 aaKnown RBP11.77□□□□□ -0.53
ABCC3-215ENST00000515070 SULT6B1Q6IMI4 303 aa11.77□□□□□ -0.53
ABCC3-215ENST00000515070 LRRC37A3O60309 1634 aa11.77□□□□□ -0.53
ABCC3-215ENST00000515070 MEGF6O75095 1541 aa11.76□□□□□ -0.53
ABCC3-215ENST00000515070 APBA3O96018 575 aa11.76□□□□□ -0.53
ABCC3-215ENST00000515070 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
ABCC3-215ENST00000515070 IFNL2Q8IZJ0 200 aa11.76□□□□□ -0.53
ABCC3-215ENST00000515070 PNNQ9H307 717 aaKnown RBP11.75□□□□□ -0.53
ABCC3-215ENST00000515070 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
ABCC3-215ENST00000515070 WNK3Q9BYP7 1800 aa11.74□□□□□ -0.53
ABCC3-215ENST00000515070 U2SURPO15042 1029 aaKnown RBP11.74□□□□□ -0.53
ABCC3-215ENST00000515070 FCHSD2O94868 740 aa11.74□□□□□ -0.53
ABCC3-215ENST00000515070 PRKRIP1Q9H875 184 aaPredicted RBP11.74□□□□□ -0.53
ABCC3-215ENST00000515070 CYP27B1O15528 508 aa11.73□□□□□ -0.53
ABCC3-215ENST00000515070 PHKG2P15735 406 aa11.73□□□□□ -0.53
ABCC3-215ENST00000515070 C1orf141Q5JVX7 400 aa11.73□□□□□ -0.53
ABCC3-215ENST00000515070 COL3A1P02461 1466 aaPredicted RBP11.72□□□□□ -0.53
ABCC3-215ENST00000515070 NEFMP07197 916 aa11.72□□□□□ -0.53
ABCC3-215ENST00000515070 AEBP1Q8IUX7 1158 aa11.72□□□□□ -0.53
ABCC3-215ENST00000515070 DCAF5Q96JK2 942 aa11.72□□□□□ -0.53
ABCC3-215ENST00000515070 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
ABCC3-215ENST00000515070 ERVV-2B6SEH9 535 aa11.71□□□□□ -0.53
ABCC3-215ENST00000515070 HMOX1P09601 288 aa11.71□□□□□ -0.53
ABCC3-215ENST00000515070 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.53
ABCC3-215ENST00000515070 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.53
ABCC3-215ENST00000515070 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.53
ABCC3-215ENST00000515070 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.53
ABCC3-215ENST00000515070 AKAP4Q5JQC9 854 aa11.71□□□□□ -0.53
ABCC3-215ENST00000515070 DEFB132Q7Z7B7 95 aa11.71□□□□□ -0.53
ABCC3-215ENST00000515070 RGPD1P0DJD0 1748 aa11.71□□□□□ -0.54
ABCC3-215ENST00000515070 ANP32CO43423 234 aa11.7□□□□□ -0.54
ABCC3-215ENST00000515070 ZNF530Q6P9A1 599 aaPredicted RBP11.7□□□□□ -0.54
ABCC3-215ENST00000515070 GAS2L2Q8NHY3 880 aa11.7□□□□□ -0.54
ABCC3-215ENST00000515070 SYTL4Q96C24 671 aaPredicted RBP11.7□□□□□ -0.54
ABCC3-215ENST00000515070 ACSBG1Q96GR2 724 aa11.7□□□□□ -0.54
ABCC3-215ENST00000515070 RGPD2P0DJD1 1756 aa11.69□□□□□ -0.54
ABCC3-215ENST00000515070 KCNQ2O43526 872 aa11.69□□□□□ -0.54
ABCC3-215ENST00000515070 SLC27A3Q5K4L6 730 aa11.69□□□□□ -0.54
ABCC3-215ENST00000515070 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
ABCC3-215ENST00000515070 SMARCC1Q92922 1105 aaPredicted RBP11.69□□□□□ -0.54
ABCC3-215ENST00000515070 EZH2Q15910 746 aaKnown RBP11.68□□□□□ -0.54
ABCC3-215ENST00000515070 RSPH6AQ9H0K4 717 aa11.68□□□□□ -0.54
ABCC3-215ENST00000515070 PKD1L3Q7Z443 1732 aa11.68□□□□□ -0.54
ABCC3-215ENST00000515070 PRKAR2BP31323 418 aa11.67□□□□□ -0.54
ABCC3-215ENST00000515070 TMOD3Q9NYL9 352 aa11.67□□□□□ -0.54
ABCC3-215ENST00000515070 GNAT3A8MTJ3 354 aa11.66□□□□□ -0.54
ABCC3-215ENST00000515070 HTATSF1O43719 755 aaKnown RBP11.66□□□□□ -0.54
ABCC3-215ENST00000515070 CABP4P57796 275 aa11.66□□□□□ -0.54
ABCC3-215ENST00000515070 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
ABCC3-215ENST00000515070 TXNRD1Q16881 649 aa11.66□□□□□ -0.54
ABCC3-215ENST00000515070 MTHFSDQ2M296 383 aaKnown RBP11.66□□□□□ -0.54
ABCC3-215ENST00000515070 MPRIPQ6WCQ1 1025 aa11.66□□□□□ -0.54
ABCC3-215ENST00000515070 NHSQ6T4R5 1651 aa11.65□□□□□ -0.54
ABCC3-215ENST00000515070 PTF1AQ7RTS3 328 aa11.65□□□□□ -0.54
ABCC3-215ENST00000515070 TNS1Q9HBL0 1735 aaKnown RBP11.64□□□□□ -0.55
ABCC3-215ENST00000515070 PROM2Q8N271 834 aa11.64□□□□□ -0.55
ABCC3-215ENST00000515070 PIGBQ92521 554 aa11.64□□□□□ -0.55
ABCC3-215ENST00000515070 RTF1Q92541 710 aaKnown RBP11.64□□□□□ -0.55
ABCC3-215ENST00000515070 SBF2Q86WG5 1849 aa11.64□□□□□ -0.55
ABCC3-215ENST00000515070 RGPD3A6NKT7 1758 aaPredicted RBP11.64□□□□□ -0.55
ABCC3-215ENST00000515070 RGPD4Q7Z3J3 1758 aa11.64□□□□□ -0.55
ABCC3-215ENST00000515070 SHANK3Q9BYB0 1731 aa11.63□□□□□ -0.55
ABCC3-215ENST00000515070 MAPK8IP3Q9UPT6 1336 aa11.63□□□□□ -0.55
ABCC3-215ENST00000515070 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
ABCC3-215ENST00000515070 MAP3K5Q99683 1374 aa11.63□□□□□ -0.55
ABCC3-215ENST00000515070 RNMTO43148 476 aaKnown RBP11.62□□□□□ -0.55
ABCC3-215ENST00000515070 NFATC2IPQ8NCF5 419 aa11.62□□□□□ -0.55
ABCC3-215ENST00000515070 PLEKHF1Q96S99 279 aa11.62□□□□□ -0.55
ABCC3-215ENST00000515070 SLC52A2Q9HAB3 445 aa11.62□□□□□ -0.55
ABCC3-215ENST00000515070 TEFQ10587 303 aa11.61□□□□□ -0.55
ABCC3-215ENST00000515070 STK32BQ9NY57 414 aa11.61□□□□□ -0.55
ABCC3-215ENST00000515070 CCNL1Q9UK58 526 aaPredicted RBP11.61□□□□□ -0.55
ABCC3-215ENST00000515070 PALLDQ8WX93 1383 aa11.61□□□□□ -0.55
ABCC3-215ENST00000515070 KDM6AO15550 1401 aaPredicted RBP11.6□□□□□ -0.55
ABCC3-215ENST00000515070 LMOD3Q0VAK6 560 aa11.6□□□□□ -0.55
ABCC3-215ENST00000515070 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
ABCC3-215ENST00000515070 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
ABCC3-215ENST00000515070 ATG3Q9NT62 314 aa11.6□□□□□ -0.55
ABCC3-215ENST00000515070 CEMIPQ8WUJ3 1361 aa11.59□□□□□ -0.55
ABCC3-215ENST00000515070 LOC102724428A0A0B4J2F2 783 aa11.59□□□□□ -0.55
ABCC3-215ENST00000515070 SIK1P57059 783 aa11.59□□□□□ -0.55
ABCC3-215ENST00000515070 NFE2L2Q16236 605 aa11.59□□□□□ -0.55
ABCC3-215ENST00000515070 SLC15A2Q16348 729 aa11.59□□□□□ -0.55
ABCC3-215ENST00000515070 IL17REQ8NFR9 667 aa11.59□□□□□ -0.55
ABCC3-215ENST00000515070 ASAP1Q9ULH1 1129 aa11.59□□□□□ -0.55
ABCC3-215ENST00000515070 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
ABCC3-215ENST00000515070 DOT1LQ8TEK3 1739 aa11.58□□□□□ -0.56
ABCC3-215ENST00000515070 FLAD1Q8NFF5 587 aa11.58□□□□□ -0.56
ABCC3-215ENST00000515070 PNISRQ8TF01 805 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 1447.8 ms