RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 PRKRIP1Q9H875 184 aaPredicted RBP20.79■□□□□ 0.92
MATR3-239ENST00000514694 KDRP35968 1356 aa20.78■□□□□ 0.92
MATR3-239ENST00000514694 TATP17735 454 aaPredicted RBP20.78■□□□□ 0.92
MATR3-239ENST00000514694 SULT6B1Q6IMI4 303 aa20.78■□□□□ 0.92
MATR3-239ENST00000514694 FAM196AQ6ZSG2 479 aa20.77■□□□□ 0.92
MATR3-239ENST00000514694 ZCRB1Q8TBF4 217 aaKnown RBP20.77■□□□□ 0.92
MATR3-239ENST00000514694 DDX54Q8TDD1 881 aaKnown RBP20.77■□□□□ 0.92
MATR3-239ENST00000514694 SHANK3Q9BYB0 1731 aa20.77■□□□□ 0.92
MATR3-239ENST00000514694 HMOX1P09601 288 aa20.76■□□□□ 0.91
MATR3-239ENST00000514694 PTF1AQ7RTS3 328 aa20.75■□□□□ 0.91
MATR3-239ENST00000514694 CFAP53Q96M91 514 aa20.75■□□□□ 0.91
MATR3-239ENST00000514694 MYBBP1AQ9BQG0 1328 aaKnown RBP20.75■□□□□ 0.91
MATR3-239ENST00000514694 U2SURPO15042 1029 aaKnown RBP20.73■□□□□ 0.91
MATR3-239ENST00000514694 CYP27B1O15528 508 aa20.73■□□□□ 0.91
MATR3-239ENST00000514694 TRIM37O94972 964 aa20.73■□□□□ 0.91
MATR3-239ENST00000514694 PKD1L3Q7Z443 1732 aa20.73■□□□□ 0.91
MATR3-239ENST00000514694 BCL9O00512 1426 aa20.72■□□□□ 0.91
MATR3-239ENST00000514694 KCNQ2O43526 872 aa20.7■□□□□ 0.9
MATR3-239ENST00000514694 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.7■□□□□ 0.9
MATR3-239ENST00000514694 ACSBG1Q96GR2 724 aa20.69■□□□□ 0.9
MATR3-239ENST00000514694 PCDH11XQ9BZA7 1347 aa20.69■□□□□ 0.9
MATR3-239ENST00000514694 PCDH11YQ9BZA8 1340 aa20.69■□□□□ 0.9
MATR3-239ENST00000514694 DEFB132Q7Z7B7 95 aa20.68■□□□□ 0.9
MATR3-239ENST00000514694 SPG7Q9UQ90 795 aa20.68■□□□□ 0.9
MATR3-239ENST00000514694 TNS1Q9HBL0 1735 aaKnown RBP20.67■□□□□ 0.9
MATR3-239ENST00000514694 RSPH6AQ9H0K4 717 aa20.67■□□□□ 0.9
MATR3-239ENST00000514694 PLEKHG2Q9H7P9 1386 aa20.67■□□□□ 0.9
MATR3-239ENST00000514694 U2AF1L5P0DN76 240 aaPredicted RBP20.66■□□□□ 0.9
MATR3-239ENST00000514694 U2AF1Q01081 240 aaKnown RBP eCLIP20.66■□□□□ 0.9
MATR3-239ENST00000514694 CCDC184Q52MB2 194 aa20.66■□□□□ 0.9
MATR3-239ENST00000514694 CCDC125Q86Z20 511 aa20.66■□□□□ 0.9
MATR3-239ENST00000514694 NUDCQ9Y266 331 aa20.66■□□□□ 0.9
MATR3-239ENST00000514694 SBF2Q86WG5 1849 aa20.65■□□□□ 0.9
MATR3-239ENST00000514694 PHKG2P15735 406 aa20.65■□□□□ 0.9
MATR3-239ENST00000514694 PLEKHO1Q53GL0 409 aaPredicted RBP20.65■□□□□ 0.9
MATR3-239ENST00000514694 ZNF530Q6P9A1 599 aaPredicted RBP20.64■□□□□ 0.89
MATR3-239ENST00000514694 BCL11BQ9C0K0 894 aaPredicted RBP20.64■□□□□ 0.89
MATR3-239ENST00000514694 PRKAR2BP31323 418 aa20.63■□□□□ 0.89
MATR3-239ENST00000514694 NKX1-1Q15270 411 aaPredicted RBP20.63■□□□□ 0.89
MATR3-239ENST00000514694 PHACTR3Q96KR7 559 aa20.63■□□□□ 0.89
MATR3-239ENST00000514694 NHSQ6T4R5 1651 aa20.62■□□□□ 0.89
MATR3-239ENST00000514694 ANP32CO43423 234 aa20.62■□□□□ 0.89
MATR3-239ENST00000514694 APBA3O96018 575 aa20.62■□□□□ 0.89
MATR3-239ENST00000514694 PRIM1P49642 420 aaKnown RBP20.62■□□□□ 0.89
MATR3-239ENST00000514694 MTHFSDQ2M296 383 aaKnown RBP20.62■□□□□ 0.89
MATR3-239ENST00000514694 AMOTQ4VCS5 1084 aa20.62■□□□□ 0.89
MATR3-239ENST00000514694 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
MATR3-239ENST00000514694 DOT1LQ8TEK3 1739 aa20.61■□□□□ 0.89
MATR3-239ENST00000514694 TOGARAM1Q9Y4F4 1720 aa20.61■□□□□ 0.89
MATR3-239ENST00000514694 EN1Q05925 392 aaPredicted RBP20.61■□□□□ 0.89
MATR3-239ENST00000514694 SF3B2Q13435 895 aaKnown RBP20.61■□□□□ 0.89
MATR3-239ENST00000514694 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
MATR3-239ENST00000514694 FCHSD2O94868 740 aa20.6■□□□□ 0.89
MATR3-239ENST00000514694 SYTL4Q96C24 671 aaPredicted RBP20.59■□□□□ 0.89
MATR3-239ENST00000514694 CAMKK2Q96RR4 588 aa20.58■□□□□ 0.89
MATR3-239ENST00000514694 BAG6P46379 1132 aa20.57■□□□□ 0.88
MATR3-239ENST00000514694 EZH2Q15910 746 aaKnown RBP20.57■□□□□ 0.88
MATR3-239ENST00000514694 MPRIPQ6WCQ1 1025 aa20.57■□□□□ 0.88
MATR3-239ENST00000514694 PLEKHF1Q96S99 279 aa20.57■□□□□ 0.88
MATR3-239ENST00000514694 C1orf141Q5JVX7 400 aa20.56■□□□□ 0.88
MATR3-239ENST00000514694 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
MATR3-239ENST00000514694 BTAF1O14981 1849 aa20.55■□□□□ 0.88
MATR3-239ENST00000514694 PROM2Q8N271 834 aa20.54■□□□□ 0.88
MATR3-239ENST00000514694 DCAF5Q96JK2 942 aa20.54■□□□□ 0.88
MATR3-239ENST00000514694 LGR6Q9HBX8 967 aa20.54■□□□□ 0.88
MATR3-239ENST00000514694 ADAMTS8Q9UP79 889 aa20.54■□□□□ 0.88
MATR3-239ENST00000514694 PIGBQ92521 554 aa20.53■□□□□ 0.88
MATR3-239ENST00000514694 PLSCR1O15162 318 aa20.52■□□□□ 0.88
MATR3-239ENST00000514694 HSP90AB1P08238 724 aaKnown RBP20.52■□□□□ 0.88
MATR3-239ENST00000514694 GAS2L2Q8NHY3 880 aa20.52■□□□□ 0.88
MATR3-239ENST00000514694 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
MATR3-239ENST00000514694 KAT6BQ8WYB5 2073 aa20.5■□□□□ 0.87
MATR3-239ENST00000514694 MAP3K5Q99683 1374 aa20.5■□□□□ 0.87
MATR3-239ENST00000514694 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
MATR3-239ENST00000514694 MRS2Q9HD23 443 aa20.5■□□□□ 0.87
MATR3-239ENST00000514694 ITGB4P16144 1822 aa20.49■□□□□ 0.87
MATR3-239ENST00000514694 ERVV-2B6SEH9 535 aa20.49■□□□□ 0.87
MATR3-239ENST00000514694 RNMTO43148 476 aaKnown RBP20.49■□□□□ 0.87
MATR3-239ENST00000514694 IL17REQ8NFR9 667 aa20.49■□□□□ 0.87
MATR3-239ENST00000514694 TMOD3Q9NYL9 352 aa20.49■□□□□ 0.87
MATR3-239ENST00000514694 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
MATR3-239ENST00000514694 GNAT3A8MTJ3 354 aa20.48■□□□□ 0.87
MATR3-239ENST00000514694 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
MATR3-239ENST00000514694 PNISRQ8TF01 805 aaKnown RBP20.48■□□□□ 0.87
MATR3-239ENST00000514694 RREB1Q92766 1687 aa20.48■□□□□ 0.87
MATR3-239ENST00000514694 RGPD3A6NKT7 1758 aaPredicted RBP20.47■□□□□ 0.87
MATR3-239ENST00000514694 RGPD4Q7Z3J3 1758 aa20.47■□□□□ 0.87
MATR3-239ENST00000514694 KCNQ4P56696 695 aa20.47■□□□□ 0.87
MATR3-239ENST00000514694 CABP4P57796 275 aa20.47■□□□□ 0.87
MATR3-239ENST00000514694 NFATC2IPQ8NCF5 419 aa20.47■□□□□ 0.87
MATR3-239ENST00000514694 ASAP1Q9ULH1 1129 aa20.47■□□□□ 0.87
MATR3-239ENST00000514694 MRC1P22897 1456 aa20.46■□□□□ 0.87
MATR3-239ENST00000514694 DIEXFQ68CQ4 756 aaKnown RBP20.46■□□□□ 0.87
MATR3-239ENST00000514694 ATG3Q9NT62 314 aa20.46■□□□□ 0.87
MATR3-239ENST00000514694 LRRC4BQ9NT99 713 aa20.46■□□□□ 0.87
MATR3-239ENST00000514694 SCN11AQ9UI33 1791 aa20.46■□□□□ 0.87
MATR3-239ENST00000514694 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
MATR3-239ENST00000514694 NFE2L2Q16236 605 aa20.45■□□□□ 0.86
MATR3-239ENST00000514694 SLC52A2Q9HAB3 445 aa20.45■□□□□ 0.86
MATR3-239ENST00000514694 MAPK8IP3Q9UPT6 1336 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms