RNA–Protein interactions for RNA: ENST00000514170.5

CNGA1-207, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CNGA1, Length 2,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-207ENST00000514170 KIAA0232Q92628 1395 aa7.09□□□□□ -1.27
CNGA1-207ENST00000514170 TTC21BQ7Z4L5 1316 aa7.09□□□□□ -1.27
CNGA1-207ENST00000514170 KDM5AP29375 1690 aaKnown RBP7.09□□□□□ -1.27
CNGA1-207ENST00000514170 CCDC94Q9BW85 323 aaPredicted RBP7.09□□□□□ -1.27
CNGA1-207ENST00000514170 ANTXR1Q9H6X2 564 aa7.09□□□□□ -1.27
CNGA1-207ENST00000514170 CENPFP49454 3210 aa7.09□□□□□ -1.27
CNGA1-207ENST00000514170 KCNQ4P56696 695 aa7.09□□□□□ -1.28
CNGA1-207ENST00000514170 FAM98CQ17RN3 349 aaKnown RBP7.09□□□□□ -1.28
CNGA1-207ENST00000514170 AEBP1Q8IUX7 1158 aa7.09□□□□□ -1.28
CNGA1-207ENST00000514170 MYH16Q9H6N6 1097 aa7.09□□□□□ -1.28
CNGA1-207ENST00000514170 GCP02774 474 aa7.08□□□□□ -1.28
CNGA1-207ENST00000514170 MTHFSP49914 203 aa7.08□□□□□ -1.28
CNGA1-207ENST00000514170 AMER1Q5JTC6 1135 aaPredicted RBP7.08□□□□□ -1.28
CNGA1-207ENST00000514170 CPS1P31327 1500 aa7.08□□□□□ -1.28
CNGA1-207ENST00000514170 FAM83GA6ND36 823 aa7.08□□□□□ -1.28
CNGA1-207ENST00000514170 LARP1Q6PKG0 1096 aaKnown RBP7.08□□□□□ -1.28
CNGA1-207ENST00000514170 TOM1L2Q6ZVM7 507 aa7.08□□□□□ -1.28
CNGA1-207ENST00000514170 PTCH1Q13635 1447 aa7.07□□□□□ -1.28
CNGA1-207ENST00000514170 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.07□□□□□ -1.28
CNGA1-207ENST00000514170 DDX54Q8TDD1 881 aaKnown RBP7.07□□□□□ -1.28
CNGA1-207ENST00000514170 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
CNGA1-207ENST00000514170 HDAC5Q9UQL6 1122 aa7.07□□□□□ -1.28
CNGA1-207ENST00000514170 XRN1Q8IZH2 1706 aaKnown RBP7.07□□□□□ -1.28
CNGA1-207ENST00000514170 PSEN1P49768 467 aa7.07□□□□□ -1.28
CNGA1-207ENST00000514170 SLC20A2Q08357 652 aa7.07□□□□□ -1.28
CNGA1-207ENST00000514170 CERS3Q8IU89 383 aa7.07□□□□□ -1.28
CNGA1-207ENST00000514170 FBXO41Q8TF61 875 aa7.07□□□□□ -1.28
CNGA1-207ENST00000514170 USP19O94966 1318 aa7.07□□□□□ -1.28
CNGA1-207ENST00000514170 CLGNO14967 610 aa7.06□□□□□ -1.28
CNGA1-207ENST00000514170 TRIM44Q96DX7 344 aaPredicted RBP7.06□□□□□ -1.28
CNGA1-207ENST00000514170 GRPEL1Q9HAV7 217 aa7.06□□□□□ -1.28
CNGA1-207ENST00000514170 CGNL1Q0VF96 1302 aa7.06□□□□□ -1.28
CNGA1-207ENST00000514170 IRX5P78411 483 aaPredicted RBP7.06□□□□□ -1.28
CNGA1-207ENST00000514170 ACSBG1Q96GR2 724 aa7.06□□□□□ -1.28
CNGA1-207ENST00000514170 AFF2P51816 1311 aa7.06□□□□□ -1.28
CNGA1-207ENST00000514170 MAP3K19Q56UN5 1328 aa7.06□□□□□ -1.28
CNGA1-207ENST00000514170 MYCNP04198 464 aaPredicted RBP7.05□□□□□ -1.28
CNGA1-207ENST00000514170 MCM4P33991 863 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 CDCA8Q53HL2 280 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 THUMPD2Q9BTF0 503 aaKnown RBP7.05□□□□□ -1.28
CNGA1-207ENST00000514170 USP21Q9UK80 565 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 MYBBP1AQ9BQG0 1328 aaKnown RBP7.05□□□□□ -1.28
CNGA1-207ENST00000514170 ATAD2Q6PL18 1390 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 U2AF1L5P0DN76 240 aaPredicted RBP7.05□□□□□ -1.28
CNGA1-207ENST00000514170 U2AF1Q01081 240 aaKnown RBP eCLIP7.05□□□□□ -1.28
CNGA1-207ENST00000514170 RALBP1Q15311 655 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 CGNQ9P2M7 1197 aaKnown RBP7.05□□□□□ -1.28
CNGA1-207ENST00000514170 SBNO2Q9Y2G9 1366 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 USP32Q8NFA0 1604 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 UQCRHLA0A096LP55 91 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 DYNC1I1O14576 645 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 UQCRHP07919 91 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 DCTN1Q14203 1278 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
CNGA1-207ENST00000514170 PIK3R4Q99570 1358 aa7.04□□□□□ -1.28
CNGA1-207ENST00000514170 USP6P35125 1406 aa7.04□□□□□ -1.28
CNGA1-207ENST00000514170 FAM135BQ49AJ0 1406 aa7.04□□□□□ -1.28
CNGA1-207ENST00000514170 R3HCC1Q9Y3T6 440 aaKnown RBP7.04□□□□□ -1.28
CNGA1-207ENST00000514170 SPATA31A3Q5VYP0 1347 aa7.04□□□□□ -1.28
CNGA1-207ENST00000514170 TECPR2O15040 1411 aa7.04□□□□□ -1.28
CNGA1-207ENST00000514170 FAM193AP78312 1265 aa7.04□□□□□ -1.28
CNGA1-207ENST00000514170 SMIM5Q71RC9 77 aa7.04□□□□□ -1.28
CNGA1-207ENST00000514170 NGEFQ8N5V2 710 aa7.04□□□□□ -1.28
CNGA1-207ENST00000514170 WWC3Q9ULE0 1092 aa7.04□□□□□ -1.28
CNGA1-207ENST00000514170 POTEAQ6S8J7 498 aa7.03□□□□□ -1.28
CNGA1-207ENST00000514170 PTF1AQ7RTS3 328 aa7.03□□□□□ -1.28
CNGA1-207ENST00000514170 SKAP1Q86WV1 359 aa7.03□□□□□ -1.28
CNGA1-207ENST00000514170 BLMP54132 1417 aaPredicted RBP7.03□□□□□ -1.28
CNGA1-207ENST00000514170 CD163L1Q9NR16 1453 aa7.03□□□□□ -1.28
CNGA1-207ENST00000514170 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
CNGA1-207ENST00000514170 TRAK2O60296 914 aa7.03□□□□□ -1.28
CNGA1-207ENST00000514170 SULT6B1Q6IMI4 303 aa7.03□□□□□ -1.28
CNGA1-207ENST00000514170 ZSCAN30Q86W11 494 aa7.03□□□□□ -1.28
CNGA1-207ENST00000514170 DNAJC2Q99543 621 aaKnown RBP7.03□□□□□ -1.28
CNGA1-207ENST00000514170 GZF1Q9H116 711 aaPredicted RBP7.03□□□□□ -1.28
CNGA1-207ENST00000514170 MIS18AQ9NYP9 233 aa7.03□□□□□ -1.28
CNGA1-207ENST00000514170 ZNF330Q9Y3S2 320 aaPredicted RBP7.03□□□□□ -1.28
CNGA1-207ENST00000514170 CCDC173Q0VFZ6 552 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 ANKRD24Q8TF21 1146 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 PPP1R9BQ96SB3 815 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 QTRT2Q9H974 415 aaKnown RBP7.02□□□□□ -1.29
CNGA1-207ENST00000514170 POLKQ9UBT6 870 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 ANKRD36BQ8N2N9 1353 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 LAMC1P11047 1609 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 PHLPP1O60346 1717 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 PER1O15534 1290 aaPredicted RBP7.02□□□□□ -1.29
CNGA1-207ENST00000514170 TMED8Q6PL24 325 aaPredicted RBP7.02□□□□□ -1.29
CNGA1-207ENST00000514170 ILDR2Q71H61 639 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 NECTIN2Q92692 538 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 LRP6O75581 1613 aa7.02□□□□□ -1.29
CNGA1-207ENST00000514170 HS1BP3Q53T59 392 aa7.01□□□□□ -1.29
CNGA1-207ENST00000514170 NBPF6Q5VWK0 638 aa7.01□□□□□ -1.29
CNGA1-207ENST00000514170 NBPF4Q96M43 638 aa7.01□□□□□ -1.29
CNGA1-207ENST00000514170 PNPLA6Q8IY17 1366 aa7.01□□□□□ -1.29
CNGA1-207ENST00000514170 SOS2Q07890 1332 aaPredicted RBP7.01□□□□□ -1.29
CNGA1-207ENST00000514170 MAPK8IP3Q9UPT6 1336 aa7.01□□□□□ -1.29
CNGA1-207ENST00000514170 PLEKHG3A1L390 1219 aa7.01□□□□□ -1.29
CNGA1-207ENST00000514170 APPP05067 770 aa7.01□□□□□ -1.29
CNGA1-207ENST00000514170 PPP2R1AP30153 589 aa7.01□□□□□ -1.29
CNGA1-207ENST00000514170 PIP4K2AP48426 406 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms