RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582		V9GYY5	206 aa	Predicted RBP	13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	IPO8	O15397	1037 aa	Known RBP	13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	FAM184A	Q8NB25	1140 aa		13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	ZNF592	Q92610	1267 aa		13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	SHROOM2	Q13796	1616 aa		13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	NEK4	P51957	841 aa		13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	USP48	Q86UV5	1035 aa		13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	GCC1	Q96CN9	775 aa		13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	CABP1	Q9NZU7	370 aa		13.42	□□□□□ -0.26
PDCD6-210	ENST00000513582	SCAF11	Q99590	1463 aa	Known RBP	13.41	□□□□□ -0.26
PDCD6-210	ENST00000513582	PRKAR2B	P31323	418 aa		13.41	□□□□□ -0.26
PDCD6-210	ENST00000513582	NUTM2G	Q5VZR2	741 aa		13.41	□□□□□ -0.26
PDCD6-210	ENST00000513582	SYNM	O15061	1565 aa		13.41	□□□□□ -0.26
PDCD6-210	ENST00000513582	KDM4A	O75164	1064 aa		13.41	□□□□□ -0.26
PDCD6-210	ENST00000513582	EVC2	Q86UK5	1308 aa		13.41	□□□□□ -0.26
PDCD6-210	ENST00000513582	MYOM1	P52179	1685 aa		13.41	□□□□□ -0.26
PDCD6-210	ENST00000513582	UVSSA	Q2YD98	709 aa		13.4	□□□□□ -0.26
PDCD6-210	ENST00000513582	IFT57	Q9NWB7	429 aa		13.4	□□□□□ -0.26
PDCD6-210	ENST00000513582	CFAP65	Q6ZU64	1925 aa	Known RBP	13.4	□□□□□ -0.26
PDCD6-210	ENST00000513582	PPIP5K1	Q6PFW1	1433 aa		13.4	□□□□□ -0.26
PDCD6-210	ENST00000513582	TMX3	Q96JJ7	454 aa		13.4	□□□□□ -0.26
PDCD6-210	ENST00000513582	DIAPH1	O60610	1272 aa	Known RBP	13.4	□□□□□ -0.26
PDCD6-210	ENST00000513582	KRT222	Q8N1A0	295 aa		13.4	□□□□□ -0.26
PDCD6-210	ENST00000513582	KIF18A	Q8NI77	898 aa		13.4	□□□□□ -0.26
PDCD6-210	ENST00000513582	AP5Z1	O43299	807 aa		13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	CCDC27	Q2M243	656 aa		13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	PTGS1	P23219	599 aa		13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	INTS3	Q68E01	1043 aa	Known RBP	13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	CHMP4C	Q96CF2	233 aa		13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	TERF2IP	Q9NYB0	399 aa		13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	CALCOCO1	Q9P1Z2	691 aa		13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	VGF	O15240	615 aa	Predicted RBP	13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	NPHP1	O15259	732 aa		13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.39	□□□□□ -0.27
PDCD6-210	ENST00000513582	RNF17	Q9BXT8	1623 aa	Known RBP	13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	BRD1	O95696	1058 aa		13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	RRS1	Q15050	365 aa	Known RBP	13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	GIMAP6	Q6P9H5	292 aa		13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	SIRT2	Q8IXJ6	389 aa		13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	TNNT3	P45378	269 aa	Predicted RBP	13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	PLEKHM2	Q8IWE5	1019 aa		13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	CFAP74	Q9C0B2	1584 aa		13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	IDI1	Q13907	227 aa		13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	TXNDC2	Q86VQ3	553 aa		13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.38	□□□□□ -0.27
PDCD6-210	ENST00000513582	TNNT1	P13805	278 aa		13.37	□□□□□ -0.27
PDCD6-210	ENST00000513582	LRMP	Q12912	555 aa		13.37	□□□□□ -0.27
PDCD6-210	ENST00000513582	CCDC112	Q8NEF3	446 aa		13.37	□□□□□ -0.27
PDCD6-210	ENST00000513582	DRC7	Q8IY82	874 aa		13.37	□□□□□ -0.27
PDCD6-210	ENST00000513582	RTF1	Q92541	710 aa	Known RBP	13.37	□□□□□ -0.27
PDCD6-210	ENST00000513582	MIS18A	Q9NYP9	233 aa		13.37	□□□□□ -0.27
PDCD6-210	ENST00000513582	IQSEC2	Q5JU85	1478 aa		13.37	□□□□□ -0.27
PDCD6-210	ENST00000513582	NCKAP5L	Q9HCH0	1330 aa		13.37	□□□□□ -0.27
PDCD6-210	ENST00000513582	ZBTB7B	O15156	539 aa	Predicted RBP	13.36	□□□□□ -0.27
PDCD6-210	ENST00000513582	CT47B1	P0C2W7	299 aa	Predicted RBP	13.36	□□□□□ -0.27
PDCD6-210	ENST00000513582	CCDC183	Q5T5S1	534 aa		13.36	□□□□□ -0.27
PDCD6-210	ENST00000513582	CASC1	Q6TDU7	716 aa		13.36	□□□□□ -0.27
PDCD6-210	ENST00000513582	OSCAR	Q8IYS5	282 aa		13.36	□□□□□ -0.27
PDCD6-210	ENST00000513582	TTC22	Q5TAA0	569 aa		13.36	□□□□□ -0.27
PDCD6-210	ENST00000513582	ANKRD36B	Q8N2N9	1353 aa		13.36	□□□□□ -0.27
PDCD6-210	ENST00000513582	GOLGA6L6	A8MZA4	724 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	ATAD2	Q6PL18	1390 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	SDS	P20132	328 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	FAM69C	Q0P6D2	419 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	RBM33	Q96EV2	1170 aa	Known RBP	13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	TMX1	Q9H3N1	280 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	CNPY2	Q9Y2B0	182 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	SMTNL1	A8MU46	457 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	KMT5B	Q4FZB7	885 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	ZRANB1	Q9UGI0	708 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	NOS1	P29475	1434 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	IQGAP1	P46940	1657 aa		13.35	□□□□□ -0.27
PDCD6-210	ENST00000513582	TMPO	P42166	694 aa	Known RBP	13.34	□□□□□ -0.27
PDCD6-210	ENST00000513582	SLC20A2	Q08357	652 aa		13.34	□□□□□ -0.27
PDCD6-210	ENST00000513582	FAM83G	A6ND36	823 aa		13.34	□□□□□ -0.27
PDCD6-210	ENST00000513582	HNRNPH2	P55795	449 aa	Known RBP	13.34	□□□□□ -0.27
PDCD6-210	ENST00000513582	SECISBP2L	Q93073	1101 aa	Known RBP	13.34	□□□□□ -0.27
PDCD6-210	ENST00000513582	FIBP	O43427	364 aa		13.34	□□□□□ -0.27
PDCD6-210	ENST00000513582	MX1	P20591	662 aa		13.34	□□□□□ -0.27
PDCD6-210	ENST00000513582	TPD52L1	Q16890	204 aa	Predicted RBP	13.34	□□□□□ -0.27
PDCD6-210	ENST00000513582	CCDC186	Q7Z3E2	898 aa		13.34	□□□□□ -0.27
PDCD6-210	ENST00000513582	TULP2	O00295	520 aa		13.33	□□□□□ -0.28
PDCD6-210	ENST00000513582	DTNB	O60941	627 aa		13.33	□□□□□ -0.28
PDCD6-210	ENST00000513582	TRIM35	Q9UPQ4	493 aa		13.33	□□□□□ -0.28
PDCD6-210	ENST00000513582	RGS22	Q8NE09	1264 aa		13.33	□□□□□ -0.28
PDCD6-210	ENST00000513582	CHMP3	Q9Y3E7	222 aa		13.33	□□□□□ -0.28
PDCD6-210	ENST00000513582	SHPRH	Q149N8	1683 aa		13.33	□□□□□ -0.28
PDCD6-210	ENST00000513582	REC8	O95072	547 aa		13.32	□□□□□ -0.28
PDCD6-210	ENST00000513582	GTF3C6	Q969F1	213 aa		13.32	□□□□□ -0.28
PDCD6-210	ENST00000513582	NRBP1	Q9UHY1	535 aa		13.32	□□□□□ -0.28
PDCD6-210	ENST00000513582	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.32	□□□□□ -0.28
PDCD6-210	ENST00000513582	EMILIN1	Q9Y6C2	1016 aa		13.32	□□□□□ -0.28
PDCD6-210	ENST00000513582	CDK19	Q9BWU1	502 aa		13.32	□□□□□ -0.28
PDCD6-210	ENST00000513582	UPF3B	Q9BZI7	483 aa	Known RBP	13.32	□□□□□ -0.28
PDCD6-210	ENST00000513582	NOL10	Q9BSC4	688 aa	Known RBP	13.31	□□□□□ -0.28
PDCD6-210	ENST00000513582	ZNF215	Q9UL58	517 aa	Predicted RBP	13.31	□□□□□ -0.28
PDCD6-210	ENST00000513582	TRPM2	O94759	1503 aa		13.31	□□□□□ -0.28
PDCD6-210	ENST00000513582	ABCC1	P33527	1531 aa		13.31	□□□□□ -0.28
PDCD6-210	ENST00000513582	CHD1	O14646	1710 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms