RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 SPG7Q9UQ90 795 aa20.89■□□□□ 0.93
SH3TC1-223ENST00000513495 DISP2A7MBM2 1401 aa20.88■□□□□ 0.93
SH3TC1-223ENST00000513495 MAPK8IP3Q9UPT6 1336 aa20.88■□□□□ 0.93
SH3TC1-223ENST00000513495 ONECUT3O60422 494 aaPredicted RBP20.88■□□□□ 0.93
SH3TC1-223ENST00000513495 PRKAR2BP31323 418 aa20.88■□□□□ 0.93
SH3TC1-223ENST00000513495 AMOTQ4VCS5 1084 aa20.88■□□□□ 0.93
SH3TC1-223ENST00000513495 PLEKHO1Q53GL0 409 aaPredicted RBP20.88■□□□□ 0.93
SH3TC1-223ENST00000513495 SEPT12Q8IYM1 358 aa20.88■□□□□ 0.93
SH3TC1-223ENST00000513495 PNISRQ8TF01 805 aaKnown RBP20.88■□□□□ 0.93
SH3TC1-223ENST00000513495 OVOS2A0A0G2JMS6 1433 aa20.87■□□□□ 0.93
SH3TC1-223ENST00000513495 PDE3BQ13370 1112 aa20.87■□□□□ 0.93
SH3TC1-223ENST00000513495 RSPH6AQ9H0K4 717 aa20.87■□□□□ 0.93
SH3TC1-223ENST00000513495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.87■□□□□ 0.93
SH3TC1-223ENST00000513495 MEGF6O75095 1541 aa20.87■□□□□ 0.93
SH3TC1-223ENST00000513495 THSD7AQ9UPZ6 1657 aa20.86■□□□□ 0.93
SH3TC1-223ENST00000513495 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
SH3TC1-223ENST00000513495 ADAMTS8Q9UP79 889 aa20.86■□□□□ 0.93
SH3TC1-223ENST00000513495 FAM9BQ8IZU0 186 aa20.85■□□□□ 0.93
SH3TC1-223ENST00000513495 TNS2Q63HR2 1409 aa20.85■□□□□ 0.93
SH3TC1-223ENST00000513495 PCDH11XQ9BZA7 1347 aa20.84■□□□□ 0.93
SH3TC1-223ENST00000513495 PCDH11YQ9BZA8 1340 aa20.84■□□□□ 0.93
SH3TC1-223ENST00000513495 LRRC37A3O60309 1634 aa20.83■□□□□ 0.93
SH3TC1-223ENST00000513495 PKD1L3Q7Z443 1732 aa20.82■□□□□ 0.92
SH3TC1-223ENST00000513495 C1orf141Q5JVX7 400 aa20.82■□□□□ 0.92
SH3TC1-223ENST00000513495 GAS2L2Q8NHY3 880 aa20.82■□□□□ 0.92
SH3TC1-223ENST00000513495 RUNDC1Q96C34 613 aa20.82■□□□□ 0.92
SH3TC1-223ENST00000513495 RGS12O14924 1447 aa20.81■□□□□ 0.92
SH3TC1-223ENST00000513495 ZNF530Q6P9A1 599 aaPredicted RBP20.8■□□□□ 0.92
SH3TC1-223ENST00000513495 DDX54Q8TDD1 881 aaKnown RBP20.8■□□□□ 0.92
SH3TC1-223ENST00000513495 KRT27Q7Z3Y8 459 aa20.79■□□□□ 0.92
SH3TC1-223ENST00000513495 CCDC146Q8IYE0 955 aa20.79■□□□□ 0.92
SH3TC1-223ENST00000513495 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
SH3TC1-223ENST00000513495 HSP90AB1P08238 724 aaKnown RBP20.78■□□□□ 0.92
SH3TC1-223ENST00000513495 PLEKHF1Q96S99 279 aa20.78■□□□□ 0.92
SH3TC1-223ENST00000513495 PHACTR3Q96KR7 559 aa20.77■□□□□ 0.92
SH3TC1-223ENST00000513495 BRWD3Q6RI45 1802 aa20.76■□□□□ 0.91
SH3TC1-223ENST00000513495 MTHFSDQ2M296 383 aaKnown RBP20.76■□□□□ 0.91
SH3TC1-223ENST00000513495 AKAP4Q5JQC9 854 aa20.76■□□□□ 0.91
SH3TC1-223ENST00000513495 PHKG2P15735 406 aa20.74■□□□□ 0.91
SH3TC1-223ENST00000513495 NFE2L2Q16236 605 aa20.74■□□□□ 0.91
SH3TC1-223ENST00000513495 ILDR2Q71H61 639 aa20.74■□□□□ 0.91
SH3TC1-223ENST00000513495 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
SH3TC1-223ENST00000513495 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
SH3TC1-223ENST00000513495 GNAT3A8MTJ3 354 aa20.73■□□□□ 0.91
SH3TC1-223ENST00000513495 CYP27B1O15528 508 aa20.73■□□□□ 0.91
SH3TC1-223ENST00000513495 LMOD3Q0VAK6 560 aa20.73■□□□□ 0.91
SH3TC1-223ENST00000513495 MARCH10Q8NA82 808 aaPredicted RBP20.73■□□□□ 0.91
SH3TC1-223ENST00000513495 MAP3K5Q99683 1374 aa20.72■□□□□ 0.91
SH3TC1-223ENST00000513495 FAM196AQ6ZSG2 479 aa20.72■□□□□ 0.91
SH3TC1-223ENST00000513495 DCAF5Q96JK2 942 aa20.71■□□□□ 0.91
SH3TC1-223ENST00000513495 APAF1O14727 1248 aa20.7■□□□□ 0.9
SH3TC1-223ENST00000513495 HTATSF1O43719 755 aaKnown RBP20.7■□□□□ 0.9
SH3TC1-223ENST00000513495 TMPOP42166 694 aaKnown RBP20.7■□□□□ 0.9
SH3TC1-223ENST00000513495 RIPK4P57078 832 aa20.7■□□□□ 0.9
SH3TC1-223ENST00000513495 NKX1-1Q15270 411 aaPredicted RBP20.69■□□□□ 0.9
SH3TC1-223ENST00000513495 NEUROD2Q15784 382 aa20.69■□□□□ 0.9
SH3TC1-223ENST00000513495 NGEFQ8N5V2 710 aa20.69■□□□□ 0.9
SH3TC1-223ENST00000513495 SOCS7O14512 581 aa20.68■□□□□ 0.9
SH3TC1-223ENST00000513495 KAT6BQ8WYB5 2073 aa20.67■□□□□ 0.9
SH3TC1-223ENST00000513495 MPRIPQ6WCQ1 1025 aa20.67■□□□□ 0.9
SH3TC1-223ENST00000513495 RRP7AQ9Y3A4 280 aaKnown RBP20.67■□□□□ 0.9
SH3TC1-223ENST00000513495 BCL9O00512 1426 aa20.67■□□□□ 0.9
SH3TC1-223ENST00000513495 DLG5Q8TDM6 1919 aa20.66■□□□□ 0.9
SH3TC1-223ENST00000513495 FAM182BQ5T319 152 aa20.66■□□□□ 0.9
SH3TC1-223ENST00000513495 ERVV-2B6SEH9 535 aa20.65■□□□□ 0.9
SH3TC1-223ENST00000513495 SYTL4Q96C24 671 aaPredicted RBP20.65■□□□□ 0.9
SH3TC1-223ENST00000513495 RNMTO43148 476 aaKnown RBP20.64■□□□□ 0.89
SH3TC1-223ENST00000513495 CABP4P57796 275 aa20.64■□□□□ 0.89
SH3TC1-223ENST00000513495 TEFQ10587 303 aa20.64■□□□□ 0.89
SH3TC1-223ENST00000513495 NCBP3Q53F19 620 aaKnown RBP20.64■□□□□ 0.89
SH3TC1-223ENST00000513495 SCN11AQ9UI33 1791 aa20.64■□□□□ 0.89
SH3TC1-223ENST00000513495 DOT1LQ8TEK3 1739 aa20.64■□□□□ 0.89
SH3TC1-223ENST00000513495 CALD1Q05682 793 aaKnown RBP20.63■□□□□ 0.89
SH3TC1-223ENST00000513495 TMOD3Q9NYL9 352 aa20.63■□□□□ 0.89
SH3TC1-223ENST00000513495 KDM6AO15550 1401 aaPredicted RBP20.62■□□□□ 0.89
SH3TC1-223ENST00000513495 ACSBG1Q96GR2 724 aa20.62■□□□□ 0.89
SH3TC1-223ENST00000513495 VIRMAQ69YN4 1812 aaKnown RBP20.62■□□□□ 0.89
SH3TC1-223ENST00000513495 PRIM1P49642 420 aaKnown RBP20.61■□□□□ 0.89
SH3TC1-223ENST00000513495 MCM10Q7L590 875 aa20.61■□□□□ 0.89
SH3TC1-223ENST00000513495 SF3B2Q13435 895 aaKnown RBP20.6■□□□□ 0.89
SH3TC1-223ENST00000513495 CCDC27Q2M243 656 aa20.6■□□□□ 0.89
SH3TC1-223ENST00000513495 LGR6Q9HBX8 967 aa20.6■□□□□ 0.89
SH3TC1-223ENST00000513495 NHSQ6T4R5 1651 aa20.6■□□□□ 0.89
SH3TC1-223ENST00000513495 ADAMTS7Q9UKP4 1686 aa20.59■□□□□ 0.89
SH3TC1-223ENST00000513495 IL17REQ8NFR9 667 aa20.59■□□□□ 0.89
SH3TC1-223ENST00000513495 BCL11BQ9C0K0 894 aaPredicted RBP20.59■□□□□ 0.89
SH3TC1-223ENST00000513495 SLC52A2Q9HAB3 445 aa20.59■□□□□ 0.89
SH3TC1-223ENST00000513495 SALL2Q9Y467 1007 aaPredicted RBP20.59■□□□□ 0.89
SH3TC1-223ENST00000513495 SBF2Q86WG5 1849 aa20.59■□□□□ 0.89
SH3TC1-223ENST00000513495 CEMIPQ8WUJ3 1361 aa20.59■□□□□ 0.89
SH3TC1-223ENST00000513495 TOGARAM1Q9Y4F4 1720 aa20.58■□□□□ 0.89
SH3TC1-223ENST00000513495 TRIM37O94972 964 aa20.58■□□□□ 0.89
SH3TC1-223ENST00000513495 HNRNPUQ00839 825 aaKnown RBP eCLIP20.58■□□□□ 0.89
SH3TC1-223ENST00000513495 DCTN1Q14203 1278 aa20.58■□□□□ 0.89
SH3TC1-223ENST00000513495 ITGB4P16144 1822 aa20.57■□□□□ 0.88
SH3TC1-223ENST00000513495 NFATC2IPQ8NCF5 419 aa20.57■□□□□ 0.88
SH3TC1-223ENST00000513495 TRIM35Q9UPQ4 493 aa20.57■□□□□ 0.88
SH3TC1-223ENST00000513495 MRC1P22897 1456 aa20.56■□□□□ 0.88
SH3TC1-223ENST00000513495 SENP3-EIF4A1A0A087X0R7 540 aa20.56■□□□□ 0.88
SH3TC1-223ENST00000513495 CCDC125Q86Z20 511 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms