RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 ZSCAN25Q6NSZ9 544 aa20.43■□□□□ 0.86
ARHGEF28-212ENST00000513042 ZSCAN29Q8IWY8 852 aaPredicted RBP20.43■□□□□ 0.86
ARHGEF28-212ENST00000513042 SCAPERQ9BY12 1400 aa20.43■□□□□ 0.86
ARHGEF28-212ENST00000513042 USP5P45974 858 aa20.42■□□□□ 0.86
ARHGEF28-212ENST00000513042 FILIP1Q7Z7B0 1213 aa20.42■□□□□ 0.86
ARHGEF28-212ENST00000513042 UBAC1Q9BSL1 405 aa20.42■□□□□ 0.86
ARHGEF28-212ENST00000513042 LRRFIP2Q9Y608 721 aaKnown RBP20.42■□□□□ 0.86
ARHGEF28-212ENST00000513042 ERICH4A6NGS2 130 aa20.42■□□□□ 0.86
ARHGEF28-212ENST00000513042 SMARCA5O60264 1052 aaPredicted RBP20.42■□□□□ 0.86
ARHGEF28-212ENST00000513042 CEP57L1Q8IYX8 460 aa20.41■□□□□ 0.86
ARHGEF28-212ENST00000513042 UPF3BQ9BZI7 483 aaKnown RBP20.41■□□□□ 0.86
ARHGEF28-212ENST00000513042 LUC7LQ9NQ29 371 aaKnown RBP20.41■□□□□ 0.86
ARHGEF28-212ENST00000513042 WDR63Q8IWG1 891 aa20.41■□□□□ 0.86
ARHGEF28-212ENST00000513042 CFTRP13569 1480 aa20.41■□□□□ 0.86
ARHGEF28-212ENST00000513042 NBPF8Q3BBV2 869 aa20.41■□□□□ 0.86
ARHGEF28-212ENST00000513042 SYCE3A1L190 88 aa20.4■□□□□ 0.86
ARHGEF28-212ENST00000513042 ZNF76P36508 570 aa20.4■□□□□ 0.86
ARHGEF28-212ENST00000513042 ZRSR2Q15696 482 aaKnown RBP20.4■□□□□ 0.86
ARHGEF28-212ENST00000513042 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
ARHGEF28-212ENST00000513042 PNISRQ8TF01 805 aaKnown RBP20.4■□□□□ 0.86
ARHGEF28-212ENST00000513042 CCDC184Q52MB2 194 aa20.4■□□□□ 0.86
ARHGEF28-212ENST00000513042 KIAA1328Q86T90 577 aa20.4■□□□□ 0.86
ARHGEF28-212ENST00000513042 IDH1O75874 414 aaKnown RBP20.39■□□□□ 0.85
ARHGEF28-212ENST00000513042 CDKL5O76039 1030 aa20.39■□□□□ 0.85
ARHGEF28-212ENST00000513042 CCDC102AQ96A19 550 aa20.39■□□□□ 0.85
ARHGEF28-212ENST00000513042 ERLIN1O75477 346 aa20.39■□□□□ 0.85
ARHGEF28-212ENST00000513042 SSR1P43307 286 aaKnown RBP20.39■□□□□ 0.85
ARHGEF28-212ENST00000513042 MPHOSPH10O00566 681 aaKnown RBP20.39■□□□□ 0.85
ARHGEF28-212ENST00000513042 TMEM57Q8N5G2 664 aa20.38■□□□□ 0.85
ARHGEF28-212ENST00000513042 LRP2BPQ9P2M1 347 aa20.38■□□□□ 0.85
ARHGEF28-212ENST00000513042 RTEL1-TNFRSF6BF6WH68 1400 aa20.38■□□□□ 0.85
ARHGEF28-212ENST00000513042 TAF3Q5VWG9 929 aa20.38■□□□□ 0.85
ARHGEF28-212ENST00000513042 CFAP45Q9UL16 551 aa20.38■□□□□ 0.85
ARHGEF28-212ENST00000513042 CCDC83Q8IWF9 413 aa20.38■□□□□ 0.85
ARHGEF28-212ENST00000513042 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
ARHGEF28-212ENST00000513042 EIF5P55010 431 aaKnown RBP20.37■□□□□ 0.85
ARHGEF28-212ENST00000513042 ZSCAN31Q96LW9 406 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF28-212ENST00000513042 EXOC6BQ9Y2D4 811 aa20.37■□□□□ 0.85
ARHGEF28-212ENST00000513042 ANKRD18AQ8IVF6 992 aa20.37■□□□□ 0.85
ARHGEF28-212ENST00000513042 EIF3JO75822 258 aaKnown RBP20.36■□□□□ 0.85
ARHGEF28-212ENST00000513042 FERMT3Q86UX7 667 aa20.36■□□□□ 0.85
ARHGEF28-212ENST00000513042 SKAP1Q86WV1 359 aa20.36■□□□□ 0.85
ARHGEF28-212ENST00000513042 TMX1Q9H3N1 280 aa20.36■□□□□ 0.85
ARHGEF28-212ENST00000513042 TXLNBQ8N3L3 684 aa20.35■□□□□ 0.85
ARHGEF28-212ENST00000513042 EPB41L2O43491 1005 aaKnown RBP20.35■□□□□ 0.85
ARHGEF28-212ENST00000513042 MCM4P33991 863 aa20.35■□□□□ 0.85
ARHGEF28-212ENST00000513042 PPP6R1Q9UPN7 881 aa20.35■□□□□ 0.85
ARHGEF28-212ENST00000513042 AIDAQ96BJ3 306 aa20.35■□□□□ 0.85
ARHGEF28-212ENST00000513042 CFAP100Q494V2 611 aa20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 BMP2KQ9NSY1 1161 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 CEP126Q9P2H0 1117 aa20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 IMMTQ16891 758 aaKnown RBP20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 CTNNA3Q9UI47 895 aa20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 SMTNL1A8MU46 457 aa20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 DHX8Q14562 1220 aaKnown RBP20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 PRPF40BQ6NWY9 871 aaKnown RBP20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 ZNF692Q9BU19 519 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF28-212ENST00000513042 MCM10Q7L590 875 aa20.33■□□□□ 0.85
ARHGEF28-212ENST00000513042 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.84
ARHGEF28-212ENST00000513042 GBP2P32456 591 aaPredicted RBP20.33■□□□□ 0.84
ARHGEF28-212ENST00000513042 MAP3K11Q16584 847 aa20.33■□□□□ 0.84
ARHGEF28-212ENST00000513042 ABCF2Q9UG63 623 aa20.33■□□□□ 0.84
ARHGEF28-212ENST00000513042 IQCEQ6IPM2 695 aa20.32■□□□□ 0.84
ARHGEF28-212ENST00000513042 GUCY1B3Q02153 619 aa20.32■□□□□ 0.84
ARHGEF28-212ENST00000513042 TAF4BQ92750 862 aa20.32■□□□□ 0.84
ARHGEF28-212ENST00000513042 C9orf84Q5VXU9 1444 aa20.32■□□□□ 0.84
ARHGEF28-212ENST00000513042 KIAA1107Q9UPP5 1409 aa20.31■□□□□ 0.84
ARHGEF28-212ENST00000513042 NEBLO76041 1014 aa20.31■□□□□ 0.84
ARHGEF28-212ENST00000513042 IGHMBP2P38935 993 aaKnown RBP20.31■□□□□ 0.84
ARHGEF28-212ENST00000513042 GOLGA6L7A0A1B0GV03 622 aa20.31■□□□□ 0.84
ARHGEF28-212ENST00000513042 KLHL10Q6JEL2 608 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 SLC26A8Q96RN1 970 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 METTL24Q5JXM2 366 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 WASF1Q92558 559 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 ARHGAP29Q52LW3 1261 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 GNAT3A8MTJ3 354 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 KRT32Q14532 448 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 MINDY4BA8MYZ0 360 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 ANKRD30BQ9BXX2 1392 aa20.3■□□□□ 0.84
ARHGEF28-212ENST00000513042 JAKMIP3Q5VZ66 844 aa20.29■□□□□ 0.84
ARHGEF28-212ENST00000513042 CCDC148Q8NFR7 591 aa20.29■□□□□ 0.84
ARHGEF28-212ENST00000513042 LARP6Q9BRS8 491 aaKnown RBP20.29■□□□□ 0.84
ARHGEF28-212ENST00000513042 PIP4K2BP78356 416 aa20.29■□□□□ 0.84
ARHGEF28-212ENST00000513042 ZC3H6P61129 1189 aaKnown RBP20.29■□□□□ 0.84
ARHGEF28-212ENST00000513042 BOLA2Q9H3K6 86 aa20.29■□□□□ 0.84
ARHGEF28-212ENST00000513042 CEP131Q9UPN4 1083 aa20.28■□□□□ 0.84
ARHGEF28-212ENST00000513042 CHMP4BP1P59074 171 aa20.28■□□□□ 0.84
ARHGEF28-212ENST00000513042 MYD88Q99836 296 aa20.28■□□□□ 0.84
ARHGEF28-212ENST00000513042 DNA2P51530 1060 aa20.28■□□□□ 0.84
ARHGEF28-212ENST00000513042 SF3B2Q13435 895 aaKnown RBP20.28■□□□□ 0.84
ARHGEF28-212ENST00000513042 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
ARHGEF28-212ENST00000513042 CASQ1P31415 396 aa20.28■□□□□ 0.84
ARHGEF28-212ENST00000513042 ZNF397Q8NF99 534 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF28-212ENST00000513042 PKNOX2Q96KN3 472 aa20.28■□□□□ 0.84
ARHGEF28-212ENST00000513042 MX1P20591 662 aa20.27■□□□□ 0.84
ARHGEF28-212ENST00000513042 TMPOP42166 694 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-212ENST00000513042 NFE2L2Q16236 605 aa20.27■□□□□ 0.84
ARHGEF28-212ENST00000513042 PRDM10Q9NQV6 1147 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms