RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 LTN1O94822 1766 aa17.89■□□□□ 0.45
DDX41-215ENST00000512431 ZCRB1Q8TBF4 217 aaKnown RBP17.88■□□□□ 0.45
DDX41-215ENST00000512431 TERF2IPQ9NYB0 399 aa17.88■□□□□ 0.45
DDX41-215ENST00000512431 CD2APQ9Y5K6 639 aa17.88■□□□□ 0.45
DDX41-215ENST00000512431 MON2Q7Z3U7 1717 aa17.88■□□□□ 0.45
DDX41-215ENST00000512431 USP47Q96K76 1375 aa17.88■□□□□ 0.45
DDX41-215ENST00000512431 SBNO2Q9Y2G9 1366 aa17.88■□□□□ 0.45
DDX41-215ENST00000512431 MSL1Q68DK7 614 aa17.87■□□□□ 0.45
DDX41-215ENST00000512431 ZNF526Q8TF50 670 aaPredicted RBP17.87■□□□□ 0.45
DDX41-215ENST00000512431 FLAD1Q8NFF5 587 aa17.86■□□□□ 0.45
DDX41-215ENST00000512431 EDC4Q6P2E9 1401 aaKnown RBP17.86■□□□□ 0.45
DDX41-215ENST00000512431 USP54Q70EL1 1684 aa17.86■□□□□ 0.45
DDX41-215ENST00000512431 SLC12A5Q9H2X9 1139 aa17.85■□□□□ 0.45
DDX41-215ENST00000512431 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
DDX41-215ENST00000512431 NSD2O96028 1365 aa17.83■□□□□ 0.45
DDX41-215ENST00000512431 AMPHP49418 695 aa17.83■□□□□ 0.44
DDX41-215ENST00000512431 CD163L1Q9NR16 1453 aa17.82■□□□□ 0.44
DDX41-215ENST00000512431 LY75O60449 1722 aa17.82■□□□□ 0.44
DDX41-215ENST00000512431 COG3Q96JB2 828 aa17.82■□□□□ 0.44
DDX41-215ENST00000512431 FAM208AQ9UK61 1670 aaKnown RBP17.82■□□□□ 0.44
DDX41-215ENST00000512431 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
DDX41-215ENST00000512431 HOXC9P31274 260 aa17.81■□□□□ 0.44
DDX41-215ENST00000512431 NEUROD1Q13562 356 aa17.8■□□□□ 0.44
DDX41-215ENST00000512431 CGNL1Q0VF96 1302 aa17.79■□□□□ 0.44
DDX41-215ENST00000512431 RAPGEF4Q8WZA2 1011 aa17.79■□□□□ 0.44
DDX41-215ENST00000512431 SIN3AQ96ST3 1273 aa17.79■□□□□ 0.44
DDX41-215ENST00000512431 CARD11Q9BXL7 1154 aa17.79■□□□□ 0.44
DDX41-215ENST00000512431 ADCY9O60503 1353 aa17.79■□□□□ 0.44
DDX41-215ENST00000512431 MAP3K19Q56UN5 1328 aa17.78■□□□□ 0.44
DDX41-215ENST00000512431 A0A1W2PP64 1363 aa17.78■□□□□ 0.44
DDX41-215ENST00000512431 AK7Q96M32 723 aa17.77■□□□□ 0.44
DDX41-215ENST00000512431 IGSF1Q8N6C5 1336 aa17.76■□□□□ 0.43
DDX41-215ENST00000512431 TATP17735 454 aaPredicted RBP17.76■□□□□ 0.43
DDX41-215ENST00000512431 PUS7Q96PZ0 661 aaKnown RBP17.76■□□□□ 0.43
DDX41-215ENST00000512431 APLP1P51693 650 aa17.75■□□□□ 0.43
DDX41-215ENST00000512431 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
DDX41-215ENST00000512431 MEGF6O75095 1541 aa17.75■□□□□ 0.43
DDX41-215ENST00000512431 PALLDQ8WX93 1383 aa17.75■□□□□ 0.43
DDX41-215ENST00000512431 MPRIPQ6WCQ1 1025 aa17.74■□□□□ 0.43
DDX41-215ENST00000512431 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
DDX41-215ENST00000512431 SMG6Q86US8 1419 aaKnown RBP17.73■□□□□ 0.43
DDX41-215ENST00000512431 KIF3CO14782 793 aa17.73■□□□□ 0.43
DDX41-215ENST00000512431 NBPF6Q5VWK0 638 aa17.73■□□□□ 0.43
DDX41-215ENST00000512431 NBPF4Q96M43 638 aa17.73■□□□□ 0.43
DDX41-215ENST00000512431 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
DDX41-215ENST00000512431 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
DDX41-215ENST00000512431 C5P01031 1676 aa17.72■□□□□ 0.43
DDX41-215ENST00000512431 PHF14O94880 888 aa17.72■□□□□ 0.43
DDX41-215ENST00000512431 FBLN1P23142 703 aa17.72■□□□□ 0.43
DDX41-215ENST00000512431 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
DDX41-215ENST00000512431 NSD3Q9BZ95 1437 aa17.72■□□□□ 0.43
DDX41-215ENST00000512431 RTL1A6NKG5 1358 aa17.71■□□□□ 0.43
DDX41-215ENST00000512431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
DDX41-215ENST00000512431 TOMM70O94826 608 aa17.69■□□□□ 0.42
DDX41-215ENST00000512431 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
DDX41-215ENST00000512431 SSFA2P28290 1259 aa17.68■□□□□ 0.42
DDX41-215ENST00000512431 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
DDX41-215ENST00000512431 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
DDX41-215ENST00000512431 C4BP0C0L5 1744 aa17.66■□□□□ 0.42
DDX41-215ENST00000512431 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
DDX41-215ENST00000512431 TAF1LQ8IZX4 1826 aa17.64■□□□□ 0.41
DDX41-215ENST00000512431 CYP27B1O15528 508 aa17.64■□□□□ 0.41
DDX41-215ENST00000512431 AMIGO3Q86WK7 504 aa17.64■□□□□ 0.41
DDX41-215ENST00000512431 DNAJC5GQ8N7S2 189 aa17.64■□□□□ 0.41
DDX41-215ENST00000512431 LOC102724428A0A0B4J2F2 783 aa17.63■□□□□ 0.41
DDX41-215ENST00000512431 SIK1P57059 783 aa17.63■□□□□ 0.41
DDX41-215ENST00000512431 HSP90AB2PQ58FF8 381 aa17.63■□□□□ 0.41
DDX41-215ENST00000512431 C16orf71Q8IYS4 520 aaPredicted RBP17.63■□□□□ 0.41
DDX41-215ENST00000512431 PIGBQ92521 554 aa17.63■□□□□ 0.41
DDX41-215ENST00000512431 GGNBP2Q9H3C7 697 aa17.63■□□□□ 0.41
DDX41-215ENST00000512431 BCS1LQ9Y276 419 aa17.63■□□□□ 0.41
DDX41-215ENST00000512431 INSRP06213 1382 aa17.63■□□□□ 0.41
DDX41-215ENST00000512431 GNPATO15228 680 aa17.62■□□□□ 0.41
DDX41-215ENST00000512431 TGFB2P61812 414 aa17.62■□□□□ 0.41
DDX41-215ENST00000512431 ARHGAP27Q6ZUM4 889 aa17.62■□□□□ 0.41
DDX41-215ENST00000512431 SPG7Q9UQ90 795 aa17.62■□□□□ 0.41
DDX41-215ENST00000512431 FYB1O15117 783 aa17.61■□□□□ 0.41
DDX41-215ENST00000512431 MMP10P09238 476 aa17.61■□□□□ 0.41
DDX41-215ENST00000512431 LINC00116Q8NCU8 138 aa17.61■□□□□ 0.41
DDX41-215ENST00000512431 ATP6V1AP38606 617 aa17.6■□□□□ 0.41
DDX41-215ENST00000512431 TMOD3Q9NYL9 352 aa17.6■□□□□ 0.41
DDX41-215ENST00000512431 FLT4P35916 1363 aa17.6■□□□□ 0.41
DDX41-215ENST00000512431 NKX1-1Q15270 411 aaPredicted RBP17.59■□□□□ 0.41
DDX41-215ENST00000512431 NLGN1Q8N2Q7 840 aa17.59■□□□□ 0.41
DDX41-215ENST00000512431 UBR3Q6ZT12 1888 aa17.58■□□□□ 0.41
DDX41-215ENST00000512431 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.41
DDX41-215ENST00000512431 KIF24Q5T7B8 1368 aa17.58■□□□□ 0.4
DDX41-215ENST00000512431 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
DDX41-215ENST00000512431 A0A0G2JLW4 131 aa17.58■□□□□ 0.4
DDX41-215ENST00000512431 RBM46Q8TBY0 533 aaKnown RBP17.58■□□□□ 0.4
DDX41-215ENST00000512431 TESK2Q96S53 571 aa17.58■□□□□ 0.4
DDX41-215ENST00000512431 NMRK2Q9NPI5 230 aa17.58■□□□□ 0.4
DDX41-215ENST00000512431 FCHSD2O94868 740 aa17.57■□□□□ 0.4
DDX41-215ENST00000512431 TMF1P82094 1093 aa17.57■□□□□ 0.4
DDX41-215ENST00000512431 TRAPPC3LQ5T215 181 aa17.57■□□□□ 0.4
DDX41-215ENST00000512431 CCDC87Q9NVE4 849 aa17.57■□□□□ 0.4
DDX41-215ENST00000512431 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
DDX41-215ENST00000512431 TOGARAM1Q9Y4F4 1720 aa17.57■□□□□ 0.4
DDX41-215ENST00000512431 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
DDX41-215ENST00000512431 TONSLQ96HA7 1378 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms